Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10036703 pacid=23171263 polypeptide=Lus10036703 locus=Lus10036703.g ID=Lus10036703.BGIv1.0 annot-version=v1.0 ATGGGGAAGATCCAGGAGGAAATCGCTGCTTCCGTTCCTATTGCTGTCTCAAATCCTGTGATCGGGGATGAGGACGTCTCTGATCTCCAGGAGGAAATCG TTGCTTCCATTCCTACCGCCGCCTCAAATCCAGTGATCGGGGATGAGGGCGTCACTCATCTCCAGGAAGAACAGATCCAGGAGGAAGTAGTTGCTTCCAT TCCTACCACCTCTTCAAATCCAGTGATTGGGGATGAGGACGTCTCTGATCTCCAGGAACAACAGGAGAAGGAGTGGCTTCTCAATGCCCAATCCTCTGGA AAGCTACTAGATAATGGATATAAAGTTCCAGACTTGAACCTTACCGCTATTGAGTCAGCTTCACTGGGAGACTTTGACATTTTTGCTGAGAAGGAGTGGC TTCTTAATGCCGAATCCTCTGGAAAGCTGCTACACGATGGATATAAAGTTCCAGACTTGAATGTTCCCGCTGTGTTGGACGAAAATGCTTGTAAACGGCC ATCTCTGGACCTGAATGAGGTTCCTCCTGAGTCACCTCAAGCTTCTGTTGCTCTTTCTGTGGGAGACTTTGATACTTTTGCTGAGGTAAATGGTCGTTCT TACATTCTTACCGAAGAAGATTTGGCCTTAGCAGCTGACTATTTTAAGGGAGATGATGGAGCTGTTGGTGCTAGCTACTATTGA
AA sequence Show only first row Show all	>Lus10036703 pacid=23171263 polypeptide=Lus10036703 locus=Lus10036703.g ID=Lus10036703.BGIv1.0 annot-version=v1.0 MGKIQEEIAASVPIAVSNPVIGDEDVSDLQEEIVASIPTAASNPVIGDEGVTHLQEEQIQEEVVASIPTTSSNPVIGDEDVSDLQEQQEKEWLLNAQSSG KLLDNGYKVPDLNLTAIESASLGDFDIFAEKEWLLNAESSGKLLHDGYKVPDLNVPAVLDENACKRPSLDLNEVPPESPQASVALSVGDFDTFAEVNGRS YILTEEDLALAADYFKGDDGAVGASYY

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10036703 [exp]	0	1
AT5G02320	MYB	MYB3R-5, ATMYB3...	ARABIDOPSIS THALIANA MYB DOMAI...		Lus10008010 [exp]	1.0	0.9680
AT1G72100			late embryogenesis abundant do...		Lus10000723 [exp]	1.4	0.9668
					Lus10000348 [exp]	3.0	0.9172
AT1G30370		DLAH	DAD1-like acylhydrolase, alpha...		Lus10023281 [exp]	3.9	0.9338
AT2G39210			Major facilitator superfamily ...		Lus10021512 [exp]	4.2	0.9541
AT5G63160		BT1	BTB and TAZ domain protein 1 (...		Lus10033038 [exp]	4.5	0.9505
AT5G14490	NAC	ANAC085	NAC domain containing protein ...		Lus10003668 [exp]	4.6	0.9258
AT2G46940			unknown protein		Lus10009965 [exp]	4.8	0.8718
AT1G56220			Dormancy/auxin associated fami...		Lus10020661 [exp]	6.3	0.9221
AT3G50940			P-loop containing nucleoside t...		Lus10015802 [exp]	6.6	0.9102

Compare expression of checked genes

Lus10036703 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.