Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G26710 363 / 7e-115 CYP72B1, CYP734A1, BAS1 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) AT1G75130 331 / 9e-103 CYP721A1 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1) AT3G14640 331 / 1e-102 CYP72A10 "cytochrome P450, family 72, subfamily A, polypeptide 10", cytochrome P450, family 72, subfamily A, polypeptide 10 (.1) AT3G14610 327 / 3e-101 CYP72A7 "cytochrome P450, family 72, subfamily A, polypeptide 7", cytochrome P450, family 72, subfamily A, polypeptide 7 (.1) AT3G14660 321 / 4e-99 CYP72A13 "cytochrome P450, family 72, subfamily A, polypeptide 13", cytochrome P450, family 72, subfamily A, polypeptide 13 (.1) AT3G14690 321 / 6e-99 CYP72A15 "cytochrome P450, family 72, subfamily A, polypeptide 15", cytochrome P450, family 72, subfamily A, polypeptide 15 (.1) AT3G14680 318 / 4e-98 CYP72A14 "cytochrome P450, family 72, subfamily A, polypeptide 14", cytochrome P450, family 72, subfamily A, polypeptide 14 (.1) AT3G14650 316 / 3e-97 CYP72A11 "cytochrome P450, family 72, subfamily A, polypeptide 11", cytochrome P450, family 72, subfamily A, polypeptide 11 (.1) AT2G46960 315 / 2e-96 CYP709B1 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) AT3G14630 310 / 5e-95 CYP72A9 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006245 [exp] 1378 / 0 AT2G26710 345 / 4e-108 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036817 [exp] 836 / 0 AT2G26710 382 / 3e-121 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036820 [exp] 742 / 0 AT2G26710 397 / 2e-133 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10036822 [exp] 566 / 0 AT2G26710 410 / 4e-137 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10004633 [exp] 522 / 4e-176 AT2G26710 378 / 4e-126 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Lus10026085 [exp] 474 / 2e-157 AT2G46960 375 / 6e-125 "cytochrome P450, family 709, subfamily B, polypeptide 1", cytochrome P450, family 709, subfamily B, polypeptide 1 (.1.2) Lus10019184 [exp] 463 / 5e-153 AT3G14680 369 / 2e-122 "cytochrome P450, family 72, subfamily A, polypeptide 14", cytochrome P450, family 72, subfamily A, polypeptide 14 (.1) Lus10017775 [exp] 464 / 6e-152 AT3G14630 359 / 2e-117 "cytochrome P450, family 72, subfamily A, polypeptide 9", cytochrome P450, family 72, subfamily A, polypeptide 9 (.1) Lus10026084 [exp] 453 / 4e-149 AT2G26710 375 / 6e-125 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G139400 [exp] 553 / 0 AT2G26710 402 / 2e-135 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139200 [exp] 548 / 0 AT2G26710 369 / 6e-123 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.019G071200 [exp] 548 / 0 AT2G26710 346 / 9e-114 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.019G014407 [exp] 544 / 0 AT2G26710 389 / 3e-130 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139300 [exp] 531 / 1e-179 AT2G26710 372 / 1e-123 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139600 [exp] 519 / 6e-175 AT2G26710 395 / 6e-133 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.010G139500 [exp] 442 / 8e-146 AT3G14620 283 / 4e-90 "cytochrome P450, family 72, subfamily A, polypeptide 8", cytochrome P450, family 72, subfamily A, polypeptide 8 (.1) Potri.006G154500 [exp] 371 / 6e-118 AT2G26710 789 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.018G070900 [exp] 368 / 1e-116 AT2G26710 796 / 0.0 PHYB ACTIVATION TAGGED SUPPRESSOR 1, Cytochrome P450 superfamily protein (.1) Potri.002G134500 [exp] 356 / 7e-112 AT1G75130 540 / 0.0 "cytochrome P450, family 721, subfamily A, polypeptide 1", cytochrome P450, family 721, subfamily A, polypeptide 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00067 [flax] [poplar] p450 Cytochrome P450
Representative CDS sequence Show only first row Show all	>Lus10036942 pacid=23171010 polypeptide=Lus10036942 locus=Lus10036942.g ID=Lus10036942.BGIv1.0 annot-version=v1.0 ATGAATCAGCTGGGAACTCTGTTGATCTTCCTTTCATCCTGCCTGTGTTCATACCTGGTGTTGATCATCATCAGGTTTCTGAACAGAACATGGTGGACAC CGATTCGGGTCCCATCCCAGATGAGATCGCAAGGGATCAAAGGCCCTCCTTACAGATTCTTCCATGGCAACACCAGGGAGATAGCACAGATGAGAATTCA AGCTACAGAGACCCCCATGGTGGATTTGTCCCATCATATCTTCCCGAGACTCCAGCCTCACATTTACTCTTGGACCCAGATTTATGGGAAGAACTATTTG CAGTGGTATGGCAGCAGGCCACAACTTGTAGTCACTGAACCAGAGCTAATCAAAGAAGTGCTCACCACCAGAGATGGAGCTTACGAGAAGCATGCATTTC AGGATTTCATGAAAGACTTGCTAGGCGATGGACTCGTCGTGTCCAGAGGCGAGAAATGGGTAAAGATGCGCAGGCTCGCGAACCATGCCTTCCATGGAGA AAGCTTGAAGGGAATGGTTCCGGCCATGGTTGCGAGCGTCGAGATGATGCTCGAAAGGTTGAAGAACATTAATGATGAGATTGATGCATTTCAGGAGTTC AGAATCCTGACATCAGAGATGATATCCAGGACAGCTTTTGGAAGCAGCTATTTGGAAGGAGAGAAGGTTTTCGAGTTGCTGACCAACATGGTTTCGATCA TCTCGCGAAACCAGTATAGAGTCAGGATTCCAGGACTCTCCACCATCCTCAGAATCATTTTCAGAACAGGAGATGAGCATGAATCGGCTGTTATCCAGAA AGAGATCAAACACATCATCATGAAAATGGTGAACAAAAGAAGAGAAGACAATAACAGTACTAGTTCTGCAAGTGATTTCCTTGGAATGCTTGTCAAGTCC TACACCGATCCGGACATAAAGAACAGGATCACAATGGATGACCTGGTTGACGAATGCAAGACATTCTACGTGGCGGGCCACGAAACGACATCAAGCTCGC TGACCTGGACAGTACTTCTGCTAGCTGTTCATACAGAGTGGCAAGAGAAAGCCAGGGATCAGGTGGTTCAACTGTTCGGCAACGATTCATCCCCAACTCC TGATGGCATCTCTAGACTGTCCATTCTGAATATGATCATCAACGAATCTTTGAGGCTATACCCACCATTCTTCCACGTATCGAGGAGAGTCGAGCGAGAT CAAGTACGATTGGGGCCAGGGAAGCTACTACTTCCGAAAGGGACAGAAGTTCACATCCCGTTTCTCGCAGTTCACCACAGGAGTGAGGCATGGGGGGAAG ACGCTCAGCTTTTCAGACCGGAGAGGTTTGCAGAAGGGGCAGTAGCTAAGGCATCGGCAACGTTTATGCCTTTCGGGTTGGGGCCGCGGACTTGTGTTGG CATGAACTTTGCAATCACACAGATGAAGATTGCAGTTGCCATGATCCTGCAGCGTTACAGGCTTAGGCTCTCGGATAAGTTCCTGAACAGAACATGGTGG ACACCGATTCGAGTCCAATCCCAGATGAGATCGCAAGGGATCAAAGGCCCTCCTTACAGATTCTTCCATGGCAACACTAGAGAGATAGCACAAATGAGAA TTCAAGCTACACAGACCCCCATGGTGGAGTTGTCCAACCATATATTTCCAAGACTCCAGCTTCACATCTACTCTTGGACGGAGCTCTATGGGAAGAACTA TTTGCAGTGGTATGGCAGCAGGCCACAACTTGTAGTCACTGAACCAGAGCTAATCAAAGAAGTGCTCACCAGCAAAGATGGATCTTATGAGAAGCATGCA TTTCTAGTTCTCTTGAAAGACTTGATAGGAGATGGACTCGTCGTGTCTAGAGGCGAGAAATGGGTGAAGGTGCGCAGGCTCGCCAACCATGCCTTCCATG GAGAAAGCTTGAAGAGCATGGTTCCGGCCATGATTGCGAGCGTCGAGATGATGCTCGAAAGATGGAAAAACATAAATCATGAGATTGATGCATTTCAGGA GCTTAGAGTCCTGACATCAGAGATTATATCCAGGACTGCTTTTGGGAGCAGCTACTTGGAAGGACAAAAGGTTTTCGAGCTGCTGACGGAGATGGTTTCG ATCTTCTCACGGAGCGAGTACGGTGTCAGGATTCCAGGAATCTCGACCATCCTCAGAATCATTTTCAGGAAAGGGGACGAGCATGAATCAGCTGTTCTCC GGCAAGCGATCAAAGCCATCATAATCAACATGGTGGCCAAAAGAGAGAAAGAGAATAACAACAGCAGTGCTGCTTCTGCAACTGATTTCCTTGCTCTGCT TCTCAAGGCCTACACCGATCCTGACATGAAGAAGAGAATCACAGTGGATGATCTGGTTGACGAATGCAAGACATTCTACTTGGCTGGCCACGAAACCGCC ACGAGCTCGCTGACCTGGACAGTACTCCTGCTAGCGGTTCACCCGGAGTGGCAAGAGAAAGCCAGGGATCAGGTAGTTCAACTATTCGGAAATGACACAT CCCCAACTCCTGATAGCATCTCTAGACTATCCATCCTGACCATGATCATCAACGAATCTTTGAGGCTATACCCACCGTTCTTCCACGTTTCAAGGAGAGT CGAGCGAGATCAAGTACGACTCGGTCCAGGGAAACTACTACTTCCGAAAGGGACCGAAGTTTACATTCCGGTTCTAGCGCTTCACCACAGGACTGAGGTA TGGGGGGAAGACGCTCAGCTATTCAGACCAGATAGATTTGCGGAAGGGGCAGTAGCTAAGGCATCGGCGACGTTCATGCCTTTCGGTTTGGGGCCACGGG CTTGTGTTGGTATGAACTTTGCAATGACACAAATGAAGATTGCAGTTGCCATGATCCTGCAGCGTTACAGGCTTAGGCTCTCGGATAAGTATGTACATTC CCCGGCTCAGGTTTTGACGAGCTGTCCTCGTTATGGCCTGCAAATCGTTCTTGAGAAACTTTGA
AA sequence Show only first row Show all	>Lus10036942 pacid=23171010 polypeptide=Lus10036942 locus=Lus10036942.g ID=Lus10036942.BGIv1.0 annot-version=v1.0 MNQLGTLLIFLSSCLCSYLVLIIIRFLNRTWWTPIRVPSQMRSQGIKGPPYRFFHGNTREIAQMRIQATETPMVDLSHHIFPRLQPHIYSWTQIYGKNYL QWYGSRPQLVVTEPELIKEVLTTRDGAYEKHAFQDFMKDLLGDGLVVSRGEKWVKMRRLANHAFHGESLKGMVPAMVASVEMMLERLKNINDEIDAFQEF RILTSEMISRTAFGSSYLEGEKVFELLTNMVSIISRNQYRVRIPGLSTILRIIFRTGDEHESAVIQKEIKHIIMKMVNKRREDNNSTSSASDFLGMLVKS YTDPDIKNRITMDDLVDECKTFYVAGHETTSSSLTWTVLLLAVHTEWQEKARDQVVQLFGNDSSPTPDGISRLSILNMIINESLRLYPPFFHVSRRVERD QVRLGPGKLLLPKGTEVHIPFLAVHHRSEAWGEDAQLFRPERFAEGAVAKASATFMPFGLGPRTCVGMNFAITQMKIAVAMILQRYRLRLSDKFLNRTWW TPIRVQSQMRSQGIKGPPYRFFHGNTREIAQMRIQATQTPMVELSNHIFPRLQLHIYSWTELYGKNYLQWYGSRPQLVVTEPELIKEVLTSKDGSYEKHA FLVLLKDLIGDGLVVSRGEKWVKVRRLANHAFHGESLKSMVPAMIASVEMMLERWKNINHEIDAFQELRVLTSEIISRTAFGSSYLEGQKVFELLTEMVS IFSRSEYGVRIPGISTILRIIFRKGDEHESAVLRQAIKAIIINMVAKREKENNNSSAASATDFLALLLKAYTDPDMKKRITVDDLVDECKTFYLAGHETA TSSLTWTVLLLAVHPEWQEKARDQVVQLFGNDTSPTPDSISRLSILTMIINESLRLYPPFFHVSRRVERDQVRLGPGKLLLPKGTEVYIPVLALHHRTEV WGEDAQLFRPDRFAEGAVAKASATFMPFGLGPRACVGMNFAMTQMKIAVAMILQRYRLRLSDKYVHSPAQVLTSCPRYGLQIVLEKL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G26710		CYP72B1, CYP734...	PHYB ACTIVATION TAGGED SUPPRES...		Lus10036942 [exp]	0	1
AT1G14185			Glucose-methanol-choline (GMC)...		Lus10032347 [exp]	2.4	0.9616
AT5G46970			Plant invertase/pectin methyle...		Lus10019498 [exp]	3.9	0.9481
AT2G36890	MYB	BIT1, ATMYB38, ...	REGULATOR OF AXILLARY MERISTEM...		Lus10023002 [exp]	4.5	0.9503
AT1G14190			Glucose-methanol-choline (GMC)...		Lus10032346 [exp]	4.5	0.9399
AT4G14060			Polyketide cyclase/dehydrase a...		Lus10008932 [exp]	5.9	0.9328
AT2G37460			nodulin MtN21 /EamA-like trans...		Lus10007696 [exp]	7.1	0.9152
AT5G42785			unknown protein		Lus10002541 [exp]	7.3	0.9231
AT5G44265			Bifunctional inhibitor/lipid-t...		Lus10017710 [exp]	7.3	0.8820
AT4G24130			Protein of unknown function, D...		Lus10001674 [exp]	7.7	0.9184
AT4G37980		ELI3-1, ATCAD7	CINNAMYL-ALCOHOL DEHYDROGENASE...		Lus10023268 [exp]	9.2	0.9445

Compare expression of checked genes

Lus10036942 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.