Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G07260 84 / 5e-19 UGT71C3 UDP-glucosyl transferase 71C3 (.1) AT2G29740 82 / 2e-18 UGT71C2 UDP-glucosyl transferase 71C2 (.1) AT2G31790 79 / 3e-17 UDP-Glycosyltransferase superfamily protein (.1) AT1G07240 79 / 4e-17 UGT71C5 UDP-glucosyl transferase 71C5 (.1) AT4G15280 78 / 9e-17 UGT71B5 UDP-glucosyl transferase 71B5 (.1) AT3G16520 77 / 2e-16 UGT88A1 UDP-glucosyl transferase 88A1 (.1.2.3) AT1G78270 77 / 2e-16 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT4G36770 77 / 2e-16 UDP-Glycosyltransferase superfamily protein (.1) AT1G22400 77 / 2e-16 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G07250 76 / 4e-16 UGT71C4 UDP-glucosyl transferase 71C4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036967 [exp] 274 / 7e-91 AT4G01070 172 / 3e-48 UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1, UDP-Glycosyltransferase superfamily protein (.1.2) Lus10036969 [exp] 166 / 5e-48 AT1G78270 190 / 3e-53 UDP-glucosyl transferase 85A4 (.1) Lus10037117 [exp] 101 / 2e-25 AT1G78270 143 / 2e-38 UDP-glucosyl transferase 85A4 (.1) Lus10031819 [exp] 98 / 8e-24 AT5G12890 506 / 4e-177 UDP-Glycosyltransferase superfamily protein (.1) Lus10031248 [exp] 97 / 2e-23 AT5G12890 512 / 2e-179 UDP-Glycosyltransferase superfamily protein (.1) Lus10019831 [exp] 94 / 1e-22 AT2G15490 425 / 8e-146 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10014084 [exp] 94 / 1e-22 AT2G15490 445 / 2e-153 UDP-glycosyltransferase 73B4 (.1.2.3) Lus10027542 [exp] 93 / 4e-22 AT3G16520 431 / 3e-148 UDP-glucosyl transferase 88A1 (.1.2.3) Lus10026795 [exp] 89 / 2e-20 AT3G21750 448 / 5e-155 UDP-glucosyl transferase 71B1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G089000 [exp] 172 / 1e-51 AT3G16520 174 / 3e-49 UDP-glucosyl transferase 88A1 (.1.2.3) Potri.004G126000 [exp] 157 / 9e-46 AT3G16520 192 / 9e-56 UDP-glucosyl transferase 88A1 (.1.2.3) Potri.T010801 [exp] 83 / 1e-18 AT3G16520 338 / 4e-112 UDP-glucosyl transferase 88A1 (.1.2.3) Potri.T010800 [exp] 83 / 1e-18 AT3G16520 343 / 6e-114 UDP-glucosyl transferase 88A1 (.1.2.3) Potri.001G303000 [exp] 83 / 2e-18 AT4G34131 573 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.006G048200 [exp] 82 / 2e-18 AT2G15490 193 / 7e-56 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.016G057300 [exp] 82 / 2e-18 AT2G15490 184 / 2e-52 UDP-glycosyltransferase 73B4 (.1.2.3) Potri.001G303600 [exp] 82 / 3e-18 AT4G34131 568 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.009G098966 [exp] 82 / 5e-18 AT4G34131 588 / 0.0 UDP-glucosyl transferase 73B3 (.1) Potri.006G007100 [exp] 81 / 5e-18 AT3G21760 325 / 4e-109 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10037114 pacid=23152499 polypeptide=Lus10037114 locus=Lus10037114.g ID=Lus10037114.BGIv1.0 annot-version=v1.0 ATGGCGTTGAAGTGGTTAGAAGGGAAGCCAGCAAAGTCCGTCGTGTACGTTAGTTTTGGGAACAGGACGACTCTGCCAAGAGACCAAATCAAAGAGTTGG GGAAAAGATTGATCGGATCAGGAGTTCATTTCATCTGGATGGTGAAGGACAAAGTGGACCAAAAGGACAAAGAGAGGTTGGAAGATGTTTTGGGAGAGGA GATGATGGAGGAGGTTGGGAAGAGAGGGGTGGTGGTGAAGGAGTGGGTGGATCGGGCTGACATAATTGGACACGAATTTGTGGGGGGATTTTTGAGCTGC GGGTGGAACTTTGTGGTGGGGTTTGCATGGTGCGGCGTTCCTATGATGGGGTGGCCGCCTAATGGAGATCAGAAGGTGAATGGGGGAGTGGTGGAGAGGT GTGGGCTAGGGTTTATGGGTGGGGAATGGGGTTGGATGGGAAATTTCTTGGTGAAGGGGGAAGAGATTGGGGAGAGGATTAAGGAGTTGATGGACGATGT GAAGATGAGGAAGGTTGTTGGGGAGATTAAGGAGCATGTTAGGAAGGATGTTGGTGAAGGTGTGAGTTTGAAACAGCTGGTGAACAAGTTGAGTTCTTGA
AA sequence Show only first row Show all	>Lus10037114 pacid=23152499 polypeptide=Lus10037114 locus=Lus10037114.g ID=Lus10037114.BGIv1.0 annot-version=v1.0 MALKWLEGKPAKSVVYVSFGNRTTLPRDQIKELGKRLIGSGVHFIWMVKDKVDQKDKERLEDVLGEEMMEEVGKRGVVVKEWVDRADIIGHEFVGGFLSC GWNFVVGFAWCGVPMMGWPPNGDQKVNGGVVERCGLGFMGGEWGWMGNFLVKGEEIGERIKELMDDVKMRKVVGEIKEHVRKDVGEGVSLKQLVNKLSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G07260		UGT71C3	UDP-glucosyl transferase 71C3 ...		Lus10037114 [exp]	0	1
AT5G47810		PFK2	phosphofructokinase 2 (.1)		Lus10039993 [exp]	8.9	0.8193
AT3G17930			unknown protein		Lus10042280 [exp]	9.1	0.8612
					Lus10042279 [exp]	13.0	0.8417
AT5G61280			Remorin family protein (.1)		Lus10034714 [exp]	15.1	0.8168
AT1G08070		EMB3102, OTP82	ORGANELLE TRANSCRIPT PROCESSIN...		Lus10030053 [exp]	15.6	0.8441
AT1G54730			Major facilitator superfamily ...		Lus10029964 [exp]	17.5	0.8380
AT3G47650			DnaJ/Hsp40 cysteine-rich domai...		Lus10002906 [exp]	18.6	0.8482
AT2G35210		RPA, AGD10, MEE...	MATERNAL EFFECT EMBRYO ARREST ...		Lus10000902 [exp]	20.7	0.7789
AT5G38510			Rhomboid-related intramembrane...		Lus10000628 [exp]	26.7	0.8312
AT5G19500			Tryptophan/tyrosine permease (...		Lus10036099 [exp]	29.5	0.8127

Compare expression of checked genes

Lus10037114 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.