Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10037270 pacid=23152513 polypeptide=Lus10037270 locus=Lus10037270.g ID=Lus10037270.BGIv1.0 annot-version=v1.0 ATGGAGCAACAAAAGGCTGCACCAAGGCAAAATGAGAAACTGGGTTCGTCCCCGTTTGTGGGATTCGCCGCCGACGACTGCCGCCGTGCAGCTCCTCTCG CCCTACACTGGGGTTTCGTCTCCTCTGTGAGATTCGCCGCCGATCTTGTGCGGTTCTCGTCTCCGTGTGAGATTTCATCCCGATTTGCTCTTCGGGATTT GTCCGCCAATCACGCCGAAGCACTCGGGATCAAAAGCAGCAGGGACGGAGCAAAGCGGGACGGCCGCTGGAAGGAAAACCGAAGCCGGCGAAAGCAAGCA GCCGGACGACGACGGAGCTTCCCGACCTCCAGCGGCAACGGCCCAGGGGCCTGCAGCTGTCTCGTCGACGGCTACCATGACCTCGTCGACAGCGCTGGTC CCGGCGGATTCGGTGGAAATGATCCGATGATATAG
AA sequence Show only first row Show all	>Lus10037270 pacid=23152513 polypeptide=Lus10037270 locus=Lus10037270.g ID=Lus10037270.BGIv1.0 annot-version=v1.0 MEQQKAAPRQNEKLGSSPFVGFAADDCRRAAPLALHWGFVSSVRFAADLVRFSSPCEISSRFALRDLSANHAEALGIKSSRDGAKRDGRWKENRSRRKQA AGRRRSFPTSSGNGPGACSCLVDGYHDLVDSAGPGGFGGNDPMI

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10037270 [exp]	0	1
AT1G02040	C2H2ZnF		C2H2-type zinc finger family p...		Lus10028173 [exp]	2.8	0.9400
AT3G01430			unknown protein		Lus10014527 [exp]	6.5	0.9493
AT3G61610			Galactose mutarotase-like supe...		Lus10003035 [exp]	11.4	0.9181
AT3G61610			Galactose mutarotase-like supe...		Lus10005147 [exp]	14.4	0.9160
AT3G56200			Transmembrane amino acid trans...		Lus10028165 [exp]	19.7	0.9400
AT3G56310			Melibiase family protein (.1.2...		Lus10034218 [exp]	21.0	0.9397
AT5G19790	AP2_ERF	RAP2.11	related to AP2 11 (.1)		Lus10008291 [exp]	21.6	0.9337
AT5G44250			Protein of unknown function DU...		Lus10042660 [exp]	22.3	0.9385
AT2G32090			Lactoylglutathione lyase / gly...		Lus10006122 [exp]	23.2	0.9317
AT1G68300			Adenine nucleotide alpha hydro...		Lus10041436 [exp]	24.7	0.9293

Compare expression of checked genes

Lus10037270 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.