Lus10037303 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G16800 1125 / 0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT2G19120 324 / 1e-91 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT4G30100 327 / 2e-91 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT4G15570 253 / 6e-70 MAA3 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT5G37160 177 / 9e-45 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT1G65810 167 / 1e-41 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
AT4G05540 149 / 1e-36 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT5G37150 149 / 3e-36 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT5G37030 146 / 9e-36 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
AT5G52090 145 / 2e-35 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10035717 2852 / 0 AT1G16800 1196 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10033462 337 / 6e-95 AT4G30100 1589 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10015030 241 / 6e-66 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10038906 229 / 7e-62 AT4G15570 972 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10003960 218 / 4e-58 AT4G15570 938 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10035774 167 / 1e-41 AT1G65810 541 / 7e-180 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Lus10035776 165 / 3e-40 AT1G65810 633 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Lus10035775 159 / 5e-39 AT5G37150 561 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Lus10037353 151 / 1e-36 AT1G65810 543 / 2e-177 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.010G253700 1669 / 0 AT1G16800 1405 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.005G168300 334 / 1e-93 AT4G30100 1620 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.002G093500 322 / 1e-89 AT4G30100 1637 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.017G056700 248 / 4e-68 AT4G15570 1058 / 0.0 MAGATAMA 3, P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.008G143000 174 / 5e-43 AT1G65810 680 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Potri.008G143450 173 / 6e-43 AT1G65810 694 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Potri.008G142960 173 / 6e-43 AT1G65810 683 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Potri.017G140601 170 / 3e-42 AT1G65780 777 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.017G140501 163 / 5e-40 AT1G65780 798 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Potri.017G140300 160 / 1e-39 AT1G65780 572 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
PFAM info
Representative CDS sequence
>Lus10037303 pacid=23152310 polypeptide=Lus10037303 locus=Lus10037303.g ID=Lus10037303.BGIv1.0 annot-version=v1.0
ATGGTGCATCTTCCTTTAATAAGAGCATTCAGCAGGTTTTTGATCATTCCGTCTTCTGTAAATTGCATTTCGTATTGGTCTATATCTTTGCATCTGGCAT
TTAACTTTTCCAATCTTATTGTCCTCTGTTATTACATTTCCTTCTCCATGACACCATGGTTAACTGCCCAATTTATAGTTCGAGTGGGGCAATGTGAGCT
CCGAAAGCAGTGGACTTGGGAACCAAGTATGGCAAAGTGTTTGATCCTTTCGTTATTTGATGCTAATGATGATGTGAGGCAATTTGGTAAATGTGTGTTG
GAACAAATTTCAAACACTCGCGGTCTGGCTTCTAGTTTGAAGTTTCTTTGCTCCAGCAGCTCATCATTATCAGCTATTCTTTTGGGTTTTAGGCATGCTT
GCAGAGTGGTTCTACAAGATTCTGTGATATTGAGGTTTCATACTCTGCAACATTTCTTCTTTGTGCTCGGTAAACTTATTAAAGAAGGGGATCTACCTAA
TCCAGATTTGTCAGAAAAGGCATCAGATCAGTTAAATGCTAAAAAGTACTCTTCACAAGGGGGATTCTTAACGCATCCATTTTTCAATCATATGGTTGTA
AATCTGGATGAACCTTCATCAAATGTTGACTCCAAATCTCTGGAACACTTCCGCAATGTGTTGTCTGAAACTGCATGGCCATCAATCCTGAAATGCTTGG
TAGCAGGGAAAGATTTTATTGATTACAGTCTGTGTCAGATGACTTGTGTTCGTGTACTGGAGATACTCCCTATCATTGTTGGCAGACTCCGCACATGTTG
TAATAACCATTGCTTGCTTTCTAAAAAGACGGTGGAGGGTTTGTTCAACTTTCTATGGCTTAACAATCTGACAGACTGGGGGAAGTCATCACTTAAAGTT
GTAGTCGTTTATTGGAAACGTGCATTGGCTTTGATACTCAATGACCTCAAGCTATCCTGTGGCAGCACCTCTGCTGAGACTCTGAGAACTATTGAAAATC
TTGTATCAACTGATAACATCAACAGTGAACTTCTTGCAAAGCAAGTTTCATATCTGCGTATTTCATTATGTGGTGAAGTTTCTCCTGATTCTGGAGCGGC
AAGTTTGGGAGTAAAAGCTTCATCACGTGAGGGTGATTCTTCAGTTGAACGATATTCATCCTTAGGCCTAAAATTTCATACTAACGAGGATCATTGCGGA
CAGCTTACTGATTCAGGACCATTATCAAATCGGGAGGAAAAGAGAGACGTAATTGTTCTTTCCGATGAGGATCATCCTGCACAGCTTACTGATTCTGGAC
CATTGTCAAACAGGGAGGATAAGACAAATGTGATTGTTCTTTCCGAAGAAGAAGAAGAAGAAGAATATGAATCTGTCAAGGCAACGGTCAAACCATCTTA
TACGGACTCAAATAGTGCCATGTTTGGTAGTGAGGGTGTGCCTGCTAGAGTTGATTGTGATTCTTTGCAAGCTGAAGCCGGAAAAAGGTTCTCAACCGTT
TCTGCAGAAAACACTGGCATGCTTAAAGATTCATTACTAGATGCCCAAAGAGAAGATAAGTCCGATCTATCTCGCAATTCTCAGAAGCAGGGTTCCAGTA
AAACAAGTGCTAAATTGCCTGCTCCCCTAAAATCGTCAGAAACACTGGAAAAAAGAGGAGAAGATAAATCAAGAATCAAACCCCAACCTGTAGAAAGTTT
GAAAAGCTCATCCACTGGAGCAGCCAGTTTCAGAAATATAAGTCATACTCCCGGTAGGAAGGCTCCAGAAGGGAGCAATGAAGTCCTTAAAGAATTAGCA
GGCGATACGGACGATTTGTGGGAACCAGCAATTATTTCTAGGAAGCAGCAGAAGTTGTGCCTTCCAAAACTTAATCTACCTGGCCCCAAAAGGCAAGTTA
TTCAATTGAAAACACCTTGGGATAATAGACTTGGGAATTCACATAGGTTGGAGGCTGGGTTTAAAAGATTCAAGCCTCCAAAACTTGATGAATGGTATAG
ATCCATTTTGGGGATAAATTACTATGCTATGGTGGGATTAGGCTCTACATATGAAGGTGAGGATCTAGCACGCAATATATTAAAGAAGGTGCCCGTGACC
TTTGAATCCCCTGAGCAATACGTTGACATTTTCCGGCCTCTGGTTTTGGAAGAGTTTAAGGCACAGTTGCATAGTTCTTTCATGGAAATGTCTTCGTTGG
AGGACTCATATTATGGCAGTATATCTGTCTTGTCAGTGGAAAGGGTTGATGATTTTCATCTTGTTCGCTTCGTCCATGATGATAAGGATTCAACATCATC
CAAGAGCTTTTTCGAGAATGATCTTGTTCTGCTGACCAAAGAGGCTCCTGGAAGTGCTTCTCATGATATTCATATGCTCGGGAAGGTTGAGAGGCGTGAA
AGAGACCACAAGAGAGGATCAAGTATACTACTTATCAGGTTTTATGTCCTTAATGGGTCTACACGTTTAAATCAAGCTAGGAAGCAGCTTATGGAACGTA
GCAAATGGCATGCTACCAGAATTATGAGCATAACTTCCCAACTCAGAGAATTTCATGCATTATCATCAATATATGATATCCCGATTCTTCCAATCATTTT
GAAACCTGTTACTGATTCTTCGAGTCGTGTTGAACCGATGAATTTAACTTCATGCAAGCTCTCCCCAGCCTTACAGCAACTGCTGGACACATCTTTCAAT
GATAGCCAAATCCAAGCTATCAGCACAGCTATTAGCTTACCTCGTTCCAGGAAAGATTTTGAGTTGTCTCTGATCCAGGGACCTCCAGGGACCGGGAAGA
CCCGAACTATTGTGGCCATTGTCAGTGGTCTATTATGTTCGCATGATGGAACAAGGCAAGCCAGTGGTTCTTTCAATGGACAGAATCAGCAGACTGGTGG
TTCAACTGGCTCAAGGCCAAAGGTTAGACAATCTATTGCAGTTGCAAGGGCATGGCAGGATGCAGCCATGGCTAGACAATTAAATGATGACGTAGAAAGA
AATGTTAAGGCAACAGGTAGTTGTACTAGGAGAAGGGTGCTCATCTGTGCGCAGTCGAATGCTGCTGTTGATGAGCTGGTGTCAAGAATTTCAAGTGATG
GCCTTTATGGAGATGATGGGGATATGTACAAACCATATCTTGTTAGGGTCGGTAATGCAAAAACAGTTCACTCAAATTCACTGCCTTTTTTCATCGACAC
GTTGGTTGATCAGCGTGTTGCAGAGGAGAAGATGCATCTTACTAATGCTAAAGGTGACACGAGGATGGACTCTTCTATTGATTTGCGTTCTAATCTGGAG
AAGTTAGTTGATCAGATTAGATTCTATGAGGCTAAGCGTGCCAATTTAAAAGAGGGCAATTCACAACCCGTTGAGGTTGAAGATGATAAACTCGAAGGAG
ATGATGCTAATGAAATGTCATGTGTTGAACTGGAGGTGAAACTACGCAAGTTATATGAGCAGAAAAAACAGATGTTTAGAGAACTCAGTGCAGCTCAAGC
ACAGGAGAGGAAAACGAGCGAGGAAATTAGAGGACTGAGGAATAAATTGCGGAGGACCATACTGAAGGAAGCAGAAATAGTGGTAACAACACTAAGTGGC
TGTGGTGGAGACATATACACTGTATGCTCTGAATCTATTTCCAATCACAAGTTTGGGAATGCTTCAGAGCAAACCTTATTTGATGCTGTCATAATTGATG
AAGCAGCTCAAGCTTTAGAACCTGCAACATTGATTCCTCTCCGGCTTCTGAAATCTAAAGGAACCAAGTGCATCATGGTTGGTGACCCAAAACAACTTCC
TGCAACTGTTCTCTCGGATGTCGCTAGCAAGTTCTTTTATGAATGCAGCATGTTTGAGCGGTTACAAAAAGCTGGCCATCCTGTAACCATGCTTACTAAA
CAGTATCGGATGCACCCTGAGATTTGTCGATTTCCTTCTTTGCACTTCTATGAGGGAAAATTGCTCAATGGAGAAAAAATGTCTGGGAAATCAGCACCCT
TTCATGAGACTGAGGGTCTTGGCCCTTACATATTTTATGATGTCGTTGATGGCCAAGAGCTTCGCGGTAAAAGTCCTGGTACAATGTCTCTTTATAATGA
ACATGAAGCTCAAGCTGCAGTTCAACTCCTGAAGTTTTTCAAGAAGAGGTACCCAACCGAAATTGCTGGTGCACGAATTGGCATTGTTACCCCGTACAAG
TTTCAACTTTCAATTTTGCGTGCTCGGTTGTCTAGTGCTTTTGGTTCATCTTTCCTAGCTGATATGGAATTAAATACAGTGGATGGATTTCAAGGTCGGG
AAGTAGATATTTTGATGCTTTCTACTGTACGAGCTAGTCCCTCACACTCTGCTGCAAAAGGCTCAAATTCCAGCAGCATTGGATTTGTCGCTGATGTAAG
AAGGATGAATGTCGCTCTGACCAGAGCCAAACTCTCACTTTGGATTTTGGGGAATGCTAGGACCTTAGAAAGTAACCCTACATGGGCAGCTCTAGTGAAG
GACGCTAGAGAGAGAAACTTGGTTATTTCGTCTAGGAAGCCATATGACTCTATGTTTAAAACAAGCGAAATGGTCGATTGTGTGTTGGAGAAATCGGGCA
GTCGACCAATATATGCAAAGAATGCTGAAGCTGTTTGTCATACAAGAAATCCTGGGAAACAGAAGCAGGACAAAGTGCGGCCACCTTTGAGCACTGCTAC
TTGCATTGATTCCAACACTCGAGATGCACCGGAGGTTGCTCGACATTATGATAACGGTTCCATTAAAGGAGGCAACAAAAACAGAAGGAACAGAGGTAAT
AGTGGACAAGATCTTGCAGTGATGAAGGACAGTAATGATAAGAGGCTGTCAAAGAACCCAGAATTTGCAACTGCAGGGGAAAAGGAGGTGGAGGTTAAAA
GTAAGTGCGAGAAGAAAAATAAGAAAGCCAATCGTGGGCATTCTCATACTGATAACGGAAAAGTTGAGTCCTTAAACATTGTTGGGAGTAAGAATGAGTC
GCAAAGAGAAGGCAGTGATGGGCATGAAAGGTCAGACGTTTCTCGATCCAAAGGAGGGAAGGAGTTGCTTGTGCATGAAAGTAAGAGGAAATTGGAAGTT
TCAACTTCTTCTCGTGAAGATAAATCGAGAGATAAGCACGTAAAAGCTGTTGAGGAACCTGATCAGGTGGTGGGCACTGCTAAAGACCTAATAACAAAGC
GCAAACAACAGCGAGAGGAGGTCGATGCTATTCTTTTCTCATCTCTCATTCCTATTAAGAAGTCAAAACCATCAGAGCGGAGAAATCCTCCTAAAAGAAC
TGCTTCTCCATCTTCAGATGTTACTGGTGGCATGAGACCTCCCAAAACCAAGAGAGGTAAACAATTCCCCCCCATCTTTTGCCTATTTGGAACTACACCC
CCTGTTGTGGCTCGTCGCAGAAACTTTATTTCGTTTCTTCTTCCACTTCCTCTGTTAAGAGTTTGGAATGATGGACCGGATGAAGCTCTGATGCTCTGCC
GATTCAGAAAAGTTGGAGGCTCCAGGTTCTTCATAGGGCCGCTTCCAGGGATGATTCCTTGGGAAGCAAGTCTACTAACGGTTAGTTTGGGTAAGCAGCC
ATCTGGTAGGGGAATTCAGATGGTTTAG
AA sequence
>Lus10037303 pacid=23152310 polypeptide=Lus10037303 locus=Lus10037303.g ID=Lus10037303.BGIv1.0 annot-version=v1.0
MVHLPLIRAFSRFLIIPSSVNCISYWSISLHLAFNFSNLIVLCYYISFSMTPWLTAQFIVRVGQCELRKQWTWEPSMAKCLILSLFDANDDVRQFGKCVL
EQISNTRGLASSLKFLCSSSSSLSAILLGFRHACRVVLQDSVILRFHTLQHFFFVLGKLIKEGDLPNPDLSEKASDQLNAKKYSSQGGFLTHPFFNHMVV
NLDEPSSNVDSKSLEHFRNVLSETAWPSILKCLVAGKDFIDYSLCQMTCVRVLEILPIIVGRLRTCCNNHCLLSKKTVEGLFNFLWLNNLTDWGKSSLKV
VVVYWKRALALILNDLKLSCGSTSAETLRTIENLVSTDNINSELLAKQVSYLRISLCGEVSPDSGAASLGVKASSREGDSSVERYSSLGLKFHTNEDHCG
QLTDSGPLSNREEKRDVIVLSDEDHPAQLTDSGPLSNREDKTNVIVLSEEEEEEEYESVKATVKPSYTDSNSAMFGSEGVPARVDCDSLQAEAGKRFSTV
SAENTGMLKDSLLDAQREDKSDLSRNSQKQGSSKTSAKLPAPLKSSETLEKRGEDKSRIKPQPVESLKSSSTGAASFRNISHTPGRKAPEGSNEVLKELA
GDTDDLWEPAIISRKQQKLCLPKLNLPGPKRQVIQLKTPWDNRLGNSHRLEAGFKRFKPPKLDEWYRSILGINYYAMVGLGSTYEGEDLARNILKKVPVT
FESPEQYVDIFRPLVLEEFKAQLHSSFMEMSSLEDSYYGSISVLSVERVDDFHLVRFVHDDKDSTSSKSFFENDLVLLTKEAPGSASHDIHMLGKVERRE
RDHKRGSSILLIRFYVLNGSTRLNQARKQLMERSKWHATRIMSITSQLREFHALSSIYDIPILPIILKPVTDSSSRVEPMNLTSCKLSPALQQLLDTSFN
DSQIQAISTAISLPRSRKDFELSLIQGPPGTGKTRTIVAIVSGLLCSHDGTRQASGSFNGQNQQTGGSTGSRPKVRQSIAVARAWQDAAMARQLNDDVER
NVKATGSCTRRRVLICAQSNAAVDELVSRISSDGLYGDDGDMYKPYLVRVGNAKTVHSNSLPFFIDTLVDQRVAEEKMHLTNAKGDTRMDSSIDLRSNLE
KLVDQIRFYEAKRANLKEGNSQPVEVEDDKLEGDDANEMSCVELEVKLRKLYEQKKQMFRELSAAQAQERKTSEEIRGLRNKLRRTILKEAEIVVTTLSG
CGGDIYTVCSESISNHKFGNASEQTLFDAVIIDEAAQALEPATLIPLRLLKSKGTKCIMVGDPKQLPATVLSDVASKFFYECSMFERLQKAGHPVTMLTK
QYRMHPEICRFPSLHFYEGKLLNGEKMSGKSAPFHETEGLGPYIFYDVVDGQELRGKSPGTMSLYNEHEAQAAVQLLKFFKKRYPTEIAGARIGIVTPYK
FQLSILRARLSSAFGSSFLADMELNTVDGFQGREVDILMLSTVRASPSHSAAKGSNSSSIGFVADVRRMNVALTRAKLSLWILGNARTLESNPTWAALVK
DARERNLVISSRKPYDSMFKTSEMVDCVLEKSGSRPIYAKNAEAVCHTRNPGKQKQDKVRPPLSTATCIDSNTRDAPEVARHYDNGSIKGGNKNRRNRGN
SGQDLAVMKDSNDKRLSKNPEFATAGEKEVEVKSKCEKKNKKANRGHSHTDNGKVESLNIVGSKNESQREGSDGHERSDVSRSKGGKELLVHESKRKLEV
STSSREDKSRDKHVKAVEEPDQVVGTAKDLITKRKQQREEVDAILFSSLIPIKKSKPSERRNPPKRTASPSSDVTGGMRPPKTKRGKQFPPIFCLFGTTP
PVVARRRNFISFLLPLPLLRVWNDGPDEALMLCRFRKVGGSRFFIGPLPGMIPWEASLLTVSLGKQPSGRGIQMV

DESeq2's median of ratios [FLAX]

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Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT1G16800 P-loop containing nucleoside t... Lus10037303 0 1
AT1G73960 TAF2 TBP-associated factor 2 (.1.2) Lus10036010 4.0 0.9012
AT3G59410 ATGCN2, GCN2 ARABIDOPSIS THALIANA GENERAL C... Lus10014896 5.8 0.8937
AT1G55325 MAB2, GCT MACCHI-BOU 2, GRAND CENTRAL, R... Lus10016683 7.2 0.8844
AT2G36850 CHOR, ATGSL8, A... CHORUS, glucan synthase-like 8... Lus10040891 7.3 0.8857
AT5G44180 HD Homeodomain-like transcription... Lus10039870 12.0 0.8679
AT3G09100 mRNA capping enzyme family pro... Lus10035534 14.1 0.8667
AT5G35930 AMP-dependent synthetase and l... Lus10009528 14.7 0.8703
AT4G04180 P-loop containing nucleoside t... Lus10040913 14.8 0.7827
AT3G63340 Protein phosphatase 2C family ... Lus10000491 16.0 0.8489
AT1G15240 Phox-associated domain;Phox-li... Lus10025785 16.6 0.8652

Lus10037303 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.