Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 609 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 548 / 0 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 547 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 91 / 2e-18 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035766 [exp] 852 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034847 [exp] 703 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 696 / 0 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 691 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 665 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 658 / 0 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 617 / 0 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 570 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10035765 [exp] 345 / 3e-111 AT5G13740 224 / 2e-70 zinc induced facilitator 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 643 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 611 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 595 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 188 / 1e-54 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10037341 pacid=23152589 polypeptide=Lus10037341 locus=Lus10037341.g ID=Lus10037341.BGIv1.0 annot-version=v1.0 ATGACTCCAGAGTGCACGGTACCACAGCCGATAAAACAGTACTACGAGAACTGTCCAGGTTGTAAGGTTGATCAACGCAAAGAGTCAAAAACAGGATGGC CTGTTCGAGAGTTCTGCTATATATGGGGTCTTGTCCTTTCTACAAGTTCCTCATTTATGCTTGCCAGAGCTTTGACTTCTGTTGTCTGGGGACTCGTAGC TGATCGCTATGGTCGAAAACCAGCTATACTGCTAGGGACTTCTGCCATGGTTATTTTGAACACTCTCTTTGGCCTCAGTGTGAACTTTTGGATGGCAATT GCCATGAGGTCTCTTCTTGGATGTATGAATGGTTTAATTGGAATAACAAAGGCATATGCCAGTGAAATTTTCAGAGAAGATCGACAAGCTCTGGGAATGA CAACGGTGAGCACAGCTTGGGGTATAGGATTGGTAATTGGCCCAGCTCTGGGAGGTTTCTTAGCCCAGGAAACATTGCATGTCCACAAAGACGAGAGGAC TTCCACAACAGACTCTGGTGATGCTGTGGAAACCGTATCTCGTGGTGACGAGTCAAAGGGAGACGTGGAAGGATCAGTTAAGGAAGCGAAGCAACCAGCT GCTAAACAAAGCCTACTAAGAAATTGGCCTCTAATGTCATCTATCATTGTGTATTGTGTCTTCTCACTTCATGATATGGCCTACTCTGAGTCCCCGGAAG TTGGGTGGGCTGGGATATTCAACATCAGACGTTGGTTTAGTTCTAACAATCTCGGGTACCTCATTCTACCATTTACTCGATATTTACTTCGTGCGAGCTC ACTTATTGACACACTGTTTAAACGAGTAGGTCTTGCGCTACTTCTGGTCCAACTGCTTCTGTATCCATATATAGACAGGCTTCTTGGACCTGTAAGGGTG TCCCGCCTTGCTGGGGCTTTGTCCATCCCATTATTGGCAAGTTACCCTTTCCTTGCTAAGCTTGATGGTATCACTCTGAGCCTGCTGTTGAACTGTGCGT CTATATTGAAGAATGTTCTAGCTGATCAGAGCCAGAGAGGAGCTGCTAACGGCATTGCTATGACAGGAATGTCCCTCTTTAAAGCGTTTGGTCCTGCTGG AGGAGGTGCTCTAAGAAGAAGAAGAAGTTGGAGGTTTTGTGAGTGGACTGCAAGACAGAGAGAGATGGAAACACAAGATGAAGAGCATGATGTGCCATTG TTGTTGAAGAAGAAGAAACAGTGCTATTACTATGAGGATTGTCCAGGTTGTAAAATTGATCAACTCAAAGAGTTGAAGACTGGTTTGCCTATCAAGGAGT TCCTTTCTATATGGACTGTTGTTCTTTCTACTGCTCTTCCCATATCTTCTCTTTTCCCCTATCTCTACTTCATGATAAGGGATTTCAATATTGCAGAAAA GGAGGAAGACATAGGTTACTATGCTGGCTATGTTGGAGCATCATTTATGCTTGGGAGAGCTTTGACATCAGTGTTATGGGGACTGGTTGCTGATCGTTAT GGTAGAAAGCCTGTTATCCTCTTAGGGACTTCATCGGTGGTCATTTTCAGCAGTCTCTTTGGCCTCAGTGTCAACTTCTGGATGGCTGTTAGCACAAGAT TCTTACTTGGCTGCATGAATGGTTTACTTGGTCCGATCAAGGCCTATGCAACTGAAATCTTCAGAGATGAACATCAAGCTTTGGGTTTATCCACGATTAC AACAGCATGGGGTATTGGATTGATCATTGGTCCAGCTATAGGAGGGTTCCTCGCCCAGGTTGCTAGCTACTCTTTTTGCATTATTGTTCATTACATGGTT CCATTTCATGCACTAACTACCCTCAGCTACTTGCTGCTGCAGCCAGCAGAGAAATATCCAACTTTGTTCTCCCAGGACTCCTTATTTGGCAGATTTCCTT ACTTCTTGCCATGCTTCGCTATATCGATCATTGCTTTCGGAGTAACCATTGCTTCGTGCTGGCTCCCGGAAACATTGCATATCCACAAGGGAAAGATGGA ACCACTAGGTGACTGTGACGAAGAGAAATCACTGATTGAACAAAAGAAACCAGCTGGAAAAAGCCTGCTGACAAATTGGCCTCTAATGTCAGCTATCATG GTTTACTGTGTCTTCTCACTCCATGACATGGCCTATACAGAGATATTTTCGTTGTGGGCAGTTAGCCCCAGGAAATTAGGTGGACTTGAATATTCCACAG AGAATGTTGGTGAAGTACTGGCAGTGACAGGATTGGGATTGCTTATATTCCAACTTGTTCTTTACCCATATGCAGAAAGGCTTCTCGGACCCGTAATGGT CAGCCGTCTTGCTGGTGTGTTATCGATTCCGTTGTTGGCAGCCTACCCTTTTCTGTCAAAGTTATCCGGCTTCACTCTAAGTGTGTTGATAAACTGCGCA TCGGTGTTGAAGAATCTGCTATCGGTGTCAATAGTGACGGGGTTGTTCATTCTGCAAAACAATGCAGTGGAACAACATCAAAGAGGAGCAGCAAATGGGA TTGCAATGACATCAATGTCACTCTTTAAAGCAGTTGGTCCTGCTGGCGGCGGTACTCTGTTTTCTTGGGCAGAAAAGCGTCCGGATGCTGCCTTTCTTCC AGGAACTCAAATGGTGTTCTTCGTGCTGAACGTGGTGGAGGCAATTGGAGTCCTGTTCACATTCAGGCCATTCCTAGTCCATCCAGGCCCCTAA
AA sequence Show only first row Show all	>Lus10037341 pacid=23152589 polypeptide=Lus10037341 locus=Lus10037341.g ID=Lus10037341.BGIv1.0 annot-version=v1.0 MTPECTVPQPIKQYYENCPGCKVDQRKESKTGWPVREFCYIWGLVLSTSSSFMLARALTSVVWGLVADRYGRKPAILLGTSAMVILNTLFGLSVNFWMAI AMRSLLGCMNGLIGITKAYASEIFREDRQALGMTTVSTAWGIGLVIGPALGGFLAQETLHVHKDERTSTTDSGDAVETVSRGDESKGDVEGSVKEAKQPA AKQSLLRNWPLMSSIIVYCVFSLHDMAYSESPEVGWAGIFNIRRWFSSNNLGYLILPFTRYLLRASSLIDTLFKRVGLALLLVQLLLYPYIDRLLGPVRV SRLAGALSIPLLASYPFLAKLDGITLSLLLNCASILKNVLADQSQRGAANGIAMTGMSLFKAFGPAGGGALRRRRSWRFCEWTARQREMETQDEEHDVPL LLKKKKQCYYYEDCPGCKIDQLKELKTGLPIKEFLSIWTVVLSTALPISSLFPYLYFMIRDFNIAEKEEDIGYYAGYVGASFMLGRALTSVLWGLVADRY GRKPVILLGTSSVVIFSSLFGLSVNFWMAVSTRFLLGCMNGLLGPIKAYATEIFRDEHQALGLSTITTAWGIGLIIGPAIGGFLAQVASYSFCIIVHYMV PFHALTTLSYLLLQPAEKYPTLFSQDSLFGRFPYFLPCFAISIIAFGVTIASCWLPETLHIHKGKMEPLGDCDEEKSLIEQKKPAGKSLLTNWPLMSAIM VYCVFSLHDMAYTEIFSLWAVSPRKLGGLEYSTENVGEVLAVTGLGLLIFQLVLYPYAERLLGPVMVSRLAGVLSIPLLAAYPFLSKLSGFTLSVLINCA SVLKNLLSVSIVTGLFILQNNAVEQHQRGAANGIAMTSMSLFKAVGPAGGGTLFSWAEKRPDAAFLPGTQMVFFVLNVVEAIGVLFTFRPFLVHPGP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10037341 [exp]	0	1
AT2G23770			protein kinase family protein ...		Lus10041323 [exp]	3.5	0.7330
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10035766 [exp]	8.1	0.7188
AT1G73590		ATPIN1, PIN1	ARABIDOPSIS THALIANA PIN-FORME...		Lus10009054 [exp]	9.8	0.7817
AT3G14250			RING/U-box superfamily protein...		Lus10000412 [exp]	14.5	0.7083
AT1G32240	GARP	KAN2, KANADI2	KANADI 2, Homeodomain-like sup...		Lus10035386 [exp]	15.7	0.7510
AT4G26590		ATOPT5	ARABIDOPSIS THALIANA OLIGOPEPT...		Lus10032585 [exp]	22.3	0.7712
AT2G21340			MATE efflux family protein (.1...		Lus10018080 [exp]	23.8	0.7391
AT1G71140			MATE efflux family protein (.1...		Lus10018136 [exp]	24.3	0.6502
AT3G58720			RING/U-box superfamily protein...		Lus10040151 [exp]	34.6	0.7397
AT2G21340			MATE efflux family protein (.1...		Lus10042074 [exp]	35.4	0.7039

Compare expression of checked genes

Lus10037341 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.