Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G09812 77 / 2e-18 unknown protein AT1G58007 75 / 6e-18 unknown protein AT1G11120 65 / 2e-13 unknown protein AT4G28170 44 / 8e-06 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10035787 [exp] 272 / 8e-95 AT1G09812 96 / 8e-26 unknown protein Lus10018462 [exp] 62 / 2e-12 AT1G11120 122 / 3e-36 unknown protein Lus10018564 [exp] 59 / 8e-12 AT1G11120 74 / 1e-17 unknown protein Lus10039796 [exp] 60 / 1e-11 AT1G11120 122 / 3e-36 unknown protein Lus10011221 [exp] 59 / 3e-11 AT1G11120 121 / 8e-36 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G006900 [exp] 129 / 6e-39 AT1G09812 105 / 6e-30 unknown protein Potri.004G224200 [exp] 128 / 2e-38 AT1G09812 118 / 4e-35 unknown protein Potri.004G037200 [exp] 67 / 3e-14 AT1G11120 147 / 9e-46 unknown protein Potri.011G045900 [exp] 62 / 2e-12 AT1G11120 133 / 2e-40 unknown protein Potri.019G103800 [exp] 60 / 8e-12 AT1G11120 119 / 5e-35 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10037361 pacid=23152433 polypeptide=Lus10037361 locus=Lus10037361.g ID=Lus10037361.BGIv1.0 annot-version=v1.0 ATGAGCCAATTCAACTCTACAAGTCCAACAAAGCCATGGAACATACACTACACAAGCTCATTATCAGATCACACACCACCACAATCACAGGAAGCACCAG CAGGAGGAGGAACAGTGATCATCGGCCGCGAAGAGGCTCCGTGGAAGAGCTTTGGTACATCGATGAGCGCAATCTCGTTCGGGTTTGTAGCCACGGCTAT ACTCATCTCAATGTTCTTAATCATGGCTATCTTCGAGCACCTCTTCAGGCCGAACGACCCTTCTTCTTCTTTCTCTTCACCTCAGGATGTCTCAACTAAC CTTGTCCCTGCTGCCTCTCCTTCACTACCTCCAAGGCACTTGCACAAACTCAAGAGCACACACATGGTTGAAGCAGAATCATCATATGGTTCCTCAGATT ATTCAGTGGTGATGCCAGGACATGAGTTCCCAAGCTACATTGCTCAGCCTGCACCTTTGTTGCCACCACCACCACCATGTTCAAGGGAAAGGATCTCTTG GCCTTCCCATACCTGA
AA sequence Show only first row Show all	>Lus10037361 pacid=23152433 polypeptide=Lus10037361 locus=Lus10037361.g ID=Lus10037361.BGIv1.0 annot-version=v1.0 MSQFNSTSPTKPWNIHYTSSLSDHTPPQSQEAPAGGGTVIIGREEAPWKSFGTSMSAISFGFVATAILISMFLIMAIFEHLFRPNDPSSSFSSPQDVSTN LVPAASPSLPPRHLHKLKSTHMVEAESSYGSSDYSVVMPGHEFPSYIAQPAPLLPPPPPCSRERISWPSHT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G09812			unknown protein		Lus10037361 [exp]	0	1
AT2G39700		ATHEXPALPHA1.6,...	expansin A4 (.1)		Lus10023407 [exp]	1.7	0.9251
AT5G60900		RLK1	receptor-like protein kinase 1...		Lus10030400 [exp]	6.1	0.8942
AT1G17270			O-fucosyltransferase family pr...		Lus10003929 [exp]	7.0	0.9423
AT5G14550			Core-2/I-branching beta-1,6-N-...		Lus10022242 [exp]	9.2	0.9363
AT1G61667			Protein of unknown function, D...		Lus10018396 [exp]	11.7	0.8815
AT1G09880			Rhamnogalacturonate lyase fami...		Lus10005979 [exp]	11.7	0.9243
AT4G02290		ATGH9B13	glycosyl hydrolase 9B13 (.1)		Lus10038223 [exp]	18.5	0.8775
AT3G55990		TBL29, ESK1	TRICHOME BIREFRINGENCE-LIKE 29...		Lus10007497 [exp]	19.5	0.9213
AT4G18780		LEW2, IRX1, ATC...	LEAF WILTING 2, IRREGULAR XYLE...		Lus10007296 [exp]	24.2	0.9167
AT1G18200		AtRABA6b	RAB GTPase homolog A6B (.1)		Lus10018013 [exp]	25.0	0.9173

Compare expression of checked genes

Lus10037361 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.