Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G35260 39 / 0.0006 MLP165 MLP-like protein 165 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041320 [exp] 309 / 1e-109 ND 37 / 0.003 Lus10026077 [exp] 145 / 2e-44 ND / Lus10002306 [exp] 142 / 5e-43 ND / Lus10016100 [exp] 80 / 3e-20 ND / Lus10016101 [exp] 74 / 4e-18 ND / Lus10024991 [exp] 54 / 5e-09 AT2G26040 264 / 7e-91 regulatory components of ABA receptor 14, PYR1-like 2 (.1) Lus10015339 [exp] 52 / 1e-08 ND 41 / 6e-05 Lus10026430 [exp] 52 / 3e-08 AT2G26040 264 / 1e-90 regulatory components of ABA receptor 14, PYR1-like 2 (.1) Lus10030840 [exp] 49 / 1e-07 AT1G24020 189 / 2e-62 MLP-like protein 423 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G088100 [exp] 179 / 3e-58 ND / Potri.004G032900 [exp] 55 / 8e-10 AT1G24020 59 / 2e-11 MLP-like protein 423 (.1.2) Potri.010G000600 [exp] 54 / 2e-09 AT1G24020 67 / 1e-14 MLP-like protein 423 (.1.2) Potri.004G033000 [exp] 52 / 7e-09 AT1G24020 57 / 1e-10 MLP-like protein 423 (.1.2) Potri.011G127800 [exp] 52 / 8e-09 ND / Potri.008G212500 [exp] 52 / 8e-09 AT1G24020 52 / 6e-09 MLP-like protein 423 (.1.2) Potri.008G212400 [exp] 52 / 1e-08 ND / Potri.011G025966 [exp] 46 / 1e-06 AT1G24020 55 / 7e-10 MLP-like protein 423 (.1.2) Potri.011G025900 [exp] 46 / 1e-06 AT1G24020 55 / 7e-10 MLP-like protein 423 (.1.2) Potri.004G021100 [exp] 45 / 3e-06 AT1G24020 53 / 4e-09 MLP-like protein 423 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0209 [flax] [poplar] Bet_v_1_like PF00407 [flax] [poplar] Bet_v_1 Pathogenesis-related protein Bet v 1 family
Representative CDS sequence Show only first row Show all	>Lus10037393 pacid=23152436 polypeptide=Lus10037393 locus=Lus10037393.g ID=Lus10037393.BGIv1.0 annot-version=v1.0 ATGATAAGAGGGGAGATTTGCCATGAAGCTCCGGTGGAAGCTCCGGCGAGCAAGGTGTGGGAAGCTTACCGTGGCCTTCAACTTCCCCGTCTGATTAATG AGTTGTTGCCACACCTCCTCGGCACCGTCCAAGTCTTGGAGGGCGATGGCTCCGCCGGCACCCTCATTCAGCTCACTTTTCCTCCAGGAACACCTGGGAT CGGGTACATGAAAGAAGTGTACAGAGTAATGGACGACGAGAAGCGGGTGAAAGAAACCGAACTGATAGAAGGAGGATACCTTCATCTGGGATTCGACAGT GTTGTGATCCGCTTGGAAATCATCGACAACAAACATCCACAGAAGAACACCATCATCAGATCCATTATAAAGTACGAGGTGGCTGATGACTCCAATACTC ACCTTGTATCTCTAGTTTCCATTCAACCACTCGTTACTCTTTCTCAAGTTGTTGCTGATTACATCCTCAACAACAACCATACCAATTCATTAACTCCTCT GTAA
AA sequence Show only first row Show all	>Lus10037393 pacid=23152436 polypeptide=Lus10037393 locus=Lus10037393.g ID=Lus10037393.BGIv1.0 annot-version=v1.0 MIRGEICHEAPVEAPASKVWEAYRGLQLPRLINELLPHLLGTVQVLEGDGSAGTLIQLTFPPGTPGIGYMKEVYRVMDDEKRVKETELIEGGYLHLGFDS VVIRLEIIDNKHPQKNTIIRSIIKYEVADDSNTHLVSLVSIQPLVTLSQVVADYILNNNHTNSLTPL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G26040		RCAR14, PYL2	regulatory components of ABA r...		Lus10037393 [exp]	0	1
AT4G10265			Wound-responsive family protei...		Lus10039751 [exp]	4.1	0.9466
AT4G10265			Wound-responsive family protei...		Lus10039755 [exp]	13.2	0.9215
AT1G76600			unknown protein		Lus10033761 [exp]	13.6	0.9398
AT3G48660			Protein of unknown function (D...		Lus10003120 [exp]	18.1	0.9309
AT4G10265			Wound-responsive family protei...		Lus10018533 [exp]	23.0	0.9163
AT3G53270			Small nuclear RNA activating c...		Lus10008478 [exp]	27.2	0.8845
AT1G72360	AP2_ERF	AtERF73, HRE1	HYPOXIA RESPONSIVE ERF \(ETHYL...		Lus10008214 [exp]	27.3	0.9237
AT3G09280			unknown protein		Lus10017211 [exp]	27.7	0.8436
AT1G17100			SOUL heme-binding family prote...		Lus10013045 [exp]	28.7	0.9116
AT4G10265			Wound-responsive family protei...		Lus10031613 [exp]	28.9	0.8893

Compare expression of checked genes

Lus10037393 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.