Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G43790 598 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13750 493 / 8e-172 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 475 / 1e-164 ZIF1 zinc induced facilitator 1 (.1) AT5G13940 84 / 8e-17 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034847 [exp] 519 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 518 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 513 / 1e-179 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 516 / 3e-175 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 498 / 2e-173 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 491 / 6e-171 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 491 / 6e-170 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 476 / 4e-165 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10000256 [exp] 271 / 1e-88 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G024400 [exp] 535 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 520 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.008G010600 [exp] 516 / 1e-180 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 126 / 8e-34 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10037425 pacid=23152376 polypeptide=Lus10037425 locus=Lus10037425.g ID=Lus10037425.BGIv1.0 annot-version=v1.0 ATGGCGACCGATTCGAGTGATGAAAGCGGAAATCATCGTCCTCTTCTCCAAGGAGGAGGAGGAGGAGGAGATGATGATTACCATCCCTACAAAGAGAATT GCCCAGGTTGTCGAGTCGATCTTCATAAACGCCAGCATACAGCTGTTCCTTACTTGAACTTGTCCTTCATTTGGATCGTCTCTCTTTGTACTGCTCTGCC AATTCAGTCACTGTTCCCATTCATTTACTTCATGATAAGGGACTTCCATATAGCTGAAAGAGAGGAAGATATTGGTTTCTATGCAGGATTTGTTGGATCT TCATTCATGATCGGAAGAGCAATGACATCCTTTCTCTGGGGGCGTTTAGCTGATCGATATGGGAGGAAACCTGTTATTCTAATTGGGACATTTTCGGTGG CTATATTCAATGCTCTCTTTGGTCTCAGTTCAAGCTTTTGGCTCGCAATATCTATGAGATTTCTTCTTGGATGCTTCAATAGTTTACTTGGCACAATTAG GGCTTATGCTACTGAAGTGTGTAGAGAAGAGCATCAATCTTTGGCACTATCCATTGTTAGCACTTCCCGAGGCATAGGATTGATTATAGGGCCTGCTATT GGAGGTTTTTTTGCTCAGCCTGCAGAGAAGTATCCAAGTCTATTTCCTGAGAACTCTATCTTTGGGAGATTTCCATATTTCTTACCATGCCTTCTCATAT CAATTTACTCATTGGGAGTTTTCATAGCATGTTGGTGGCTCCCTGAGACACTGCACATGCATGGAAAAGAAGAGAACGGAATATGTGATTCAGAAATTAG TAGAGAAGAAGCCTCTGCTGAGGAGTCTACTATGAAGGGTGATGTTGAAGAAGTGAGTACTAGCAGAATGCCCCCGAAACAAAATCTGCTGAAAAATTGG CCCTTAATGTCTACCATCATGGTGTATTGTGTTTTCTCACTTCAAGAAATAGCTTACTCTGAAATATTTGCACTTTGGGCAGTTAGCGACAAAAAGTATG GAGGATTGAGCTTTTCATCACAAGATGTTGGTGAAGTTCTAGCCATTTCTGGAGTTGGTCTTTTCCTGTTCCAGCTTCTTCTTTACCCGCCGATTCAAAG GGTTGTTGGGCCTCTTATGGTTACGCGCCTGTCAGCGGCAATATCAATACCCTTGCTGTCTAGCTTCCCATTCATGGCAATGCTGTCTGGGATAGTTCTC CATGTAGTATTAAACTGTGCAGCCATCGTCAGAAACACTCTCTCCGTGTCTCTTGTTACCGGGCTGTATATAATGCAGAACAAAGCTGTGCCGCAAAGTC AGAGAGCAGCTGCAAATGGGATTTCCTTAACTGCAATGTCTGTTTTCAAAGCATTTGGTCCTGCAGGAGGAGGCGCCCTCTTTGCTTGGGCACAAAAGAG GCAAGTTGCTTCCTTTCTTCCGGGGGATCAAATGGTGTTCTTCGTGTTGAATATGATCCAGCTTATTGGGTTGATCCTCACTTTCAAGCCATTCCTCGCA GTACCAGCCTGA
AA sequence Show only first row Show all	>Lus10037425 pacid=23152376 polypeptide=Lus10037425 locus=Lus10037425.g ID=Lus10037425.BGIv1.0 annot-version=v1.0 MATDSSDESGNHRPLLQGGGGGGDDDYHPYKENCPGCRVDLHKRQHTAVPYLNLSFIWIVSLCTALPIQSLFPFIYFMIRDFHIAEREEDIGFYAGFVGS SFMIGRAMTSFLWGRLADRYGRKPVILIGTFSVAIFNALFGLSSSFWLAISMRFLLGCFNSLLGTIRAYATEVCREEHQSLALSIVSTSRGIGLIIGPAI GGFFAQPAEKYPSLFPENSIFGRFPYFLPCLLISIYSLGVFIACWWLPETLHMHGKEENGICDSEISREEASAEESTMKGDVEEVSTSRMPPKQNLLKNW PLMSTIMVYCVFSLQEIAYSEIFALWAVSDKKYGGLSFSSQDVGEVLAISGVGLFLFQLLLYPPIQRVVGPLMVTRLSAAISIPLLSSFPFMAMLSGIVL HVVLNCAAIVRNTLSVSLVTGLYIMQNKAVPQSQRAAANGISLTAMSVFKAFGPAGGGALFAWAQKRQVASFLPGDQMVFFVLNMIQLIGLILTFKPFLA VPA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G43790		ZIFL2	zinc induced facilitator-like ...		Lus10037425 [exp]	0	1
AT2G38740			Haloacid dehalogenase-like hyd...		Lus10030929 [exp]	4.4	0.9575
AT4G39230			NmrA-like negative transcripti...		Lus10042311 [exp]	6.0	0.9484
AT3G48410			alpha/beta-Hydrolases superfam...		Lus10022722 [exp]	7.5	0.9516
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10001210 [exp]	8.2	0.9541
AT1G05680		UGT74E2	Uridine diphosphate glycosyltr...		Lus10024486 [exp]	12.0	0.9444
AT5G06060			NAD(P)-binding Rossmann-fold s...		Lus10004704 [exp]	12.0	0.9400
AT5G04250			Cysteine proteinases superfami...		Lus10037977 [exp]	13.3	0.9165
AT1G10370		GST30B, ATGSTU1...	GLUTATHIONE S-TRANSFERASE U17,...		Lus10030805 [exp]	14.7	0.9518
AT4G11600		LSC803, PHGPX, ...	glutathione peroxidase 6 (.1)		Lus10008537 [exp]	15.7	0.9086
AT5G51460		ATTPPA	Haloacid dehalogenase-like hyd...		Lus10031146 [exp]	17.3	0.9421

Compare expression of checked genes

Lus10037425 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.