Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G51600 726 / 0 ATMAP65-3, PLE PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) AT5G62250 513 / 3e-175 MAP65-9 microtubule-associated protein 65-9 (.1) AT3G60840 484 / 1e-162 MAP65-4 microtubule-associated protein 65-4 (.1) AT5G55230 463 / 4e-155 ATMAP65-1 microtubule-associated proteins 65-1 (.1.2) AT4G26760 453 / 2e-151 MAP65-2 microtubule-associated protein 65-2 (.1) AT1G14690 439 / 1e-145 MAP65-7 microtubule-associated protein 65-7 (.1.2) AT2G01910 424 / 1e-139 ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) AT1G27920 356 / 4e-114 MAP65-8 microtubule-associated protein 65-8 (.1) AT2G38720 353 / 1e-112 MAP65-5 microtubule-associated protein 65-5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015684 [exp] 1330 / 0 AT5G51600 759 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10032567 [exp] 459 / 2e-152 AT5G55230 850 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10043178 [exp] 456 / 7e-151 AT5G55230 847 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10031939 [exp] 419 / 6e-138 AT2G01910 838 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10035099 [exp] 410 / 3e-134 AT2G01910 822 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10008705 [exp] 384 / 7e-125 AT2G38720 565 / 0.0 microtubule-associated protein 65-5 (.1) Lus10026114 [exp] 383 / 3e-124 AT2G38720 553 / 0.0 microtubule-associated protein 65-5 (.1) Lus10015789 [exp] 381 / 2e-123 AT1G27920 673 / 0.0 microtubule-associated protein 65-8 (.1) Lus10041635 [exp] 354 / 2e-113 AT2G38720 550 / 0.0 microtubule-associated protein 65-5 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G131400 [exp] 885 / 0 AT5G51600 728 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.012G129600 [exp] 880 / 0 AT5G51600 761 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.014G070100 [exp] 592 / 0 AT5G51600 451 / 5e-149 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.011G092500 [exp] 464 / 6e-156 AT5G55230 863 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.001G356500 [exp] 462 / 8e-155 AT5G55230 853 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.008G139700 [exp] 440 / 4e-146 AT2G01910 778 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Potri.003G192400 [exp] 389 / 6e-127 AT2G38720 555 / 0.0 microtubule-associated protein 65-5 (.1) Potri.003G173300 [exp] 387 / 7e-126 AT1G27920 655 / 0.0 microtubule-associated protein 65-8 (.1) Potri.001G055100 [exp] 371 / 3e-119 AT1G27920 623 / 0.0 microtubule-associated protein 65-8 (.1) Potri.005G057150 [exp] 199 / 4e-60 AT5G51600 181 / 1e-54 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03999 [flax] [poplar] MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
Representative CDS sequence Show only first row Show all	>Lus10037691 pacid=23167351 polypeptide=Lus10037691 locus=Lus10037691.g ID=Lus10037691.BGIv1.0 annot-version=v1.0 ATGTCTCCTGTCAAGAAAGATCCATCGGTTCAGGCTGAGACAACTTGTGGTACTCTTCTATCGGAGTTGCAGATAATCTGGAATGAAGTTGGTGAGTCTG ATACTGATAAGGATAAGATGTTGTTTGAACTTGAGCAAGAGTGTCTGGAAGTGTACAGAAGAAAGGTGGACCAGGCTAACCGTAATAGAGCTCATCTGAG GCAGGCGATTGCTGATTCCGAAGCTGAGCTTGCAGCAATCTGTTCTGCAATGGGCGAAAGACCGGTGCATATTAGGCAGGCTGATCAAACCAGTGAAAGT CTGAAGGCAGAGCTTCAAAAAATTCTTCCACAGCTTGAGGAAATGCAAAAGCGCAAGGTGGACAGAAGAAACCAGTTCGTTCAAGTTCTTGAAGAGATCA GGAAAATTTCATATGAGATAAATGAAAAAGCTGATGATGGTTCTGCTAATGAAAGTGATATTTCTTTGCGGAAGCTGGAAGAGTTGCACAAAAAACTCCA AGTACTTCAAACTGAGAAGAATGATCGCTTGAAACAGGTCCAAGAGTATTTAGATGCAATCAACTCCTTATGTCTGGTACTTGGTATGGACTCGATGCAG ACGATTTCTGAAATTTATCCAGAACCGAGTAATTCAGATATATCAAAGAGAATCAGTAATGACTCCATCAAAATTTTAGCTACTGCAATTCACAGATTGC GAGAGGTCAAACTACAAAGAATGCAGAAGCTTCAAGATCTTGCAACTGCAATGTTGGAGCTGTGGAACTTGATGGATACCCCTATAGAAGAGCAGCAAAG ATTCCAGAATGTTACATGCAATATAGCTGCAGCAGAACATGAGATAACTGAACCAAACACACTATCCTTGGACTTCATAAACTTTGTTGGAGCAGAAGTC TCTCGGCTGGAAGAGTTGAAAATTAGCAAGATGAGAGAGCTAGTTCTGAAAAAGAGGTCAGAGCTGGAAGAAGTCTGTCGGAAGACACATATGATCCCAC AAGCAAATACAGCGTTAGATTGTGCCATCGAAGCCATAGAGTCTGGACAAGTTGACCCTAGCAGTATCCTGGAGCAGATTGAATTTCAAGTTGCTAACGT GAAGGAAGAAGCTTTTAGCAGGAAGGAAATACTTGACAAGGTTGAGAAATGGAGAGCTGCATGTGAGGAAGAGTCCTGGCTAGAGGAGTATAATAGGGAT GATAATCGATACAATGCCGGGAGAGGTACTCACTTGATTCTCAAGCGGGCTGAGAAAGCTCGTGCTTTAGTCACCAAAATTCCAGGCATGGTGGAGGGTT TGGCTTCAAAAACAATGGCATGGGAAAAGGAGAGGGGCATAGAGTTCTTATACGACGGTATTCGCCTTCTTTCCATGCTTGAAGAGAACACCATACTACG GCAGGAGAAAGAGGAAGACAAACGAAGGCAGAGGGATCAAAAGAAGCTACAAGGACAGCTGATTGCAGAACAAGAGGCACTCTACGGGTCAAAACCAAGC CCTTCTAAGAATCTAAGTATGAAAAAGGGTTCTAGAGTTTCCATGGGAGGTGCAGGTTCAGTAAGCAATAGAAGGCTCTCGGTCGGAGGAGCTGTGCCAC AAACTCCAAAACTCGACAAGACACTCTCTAGCAGAACACTCAACTGCCGGTCAGCCAAGAAAATCAACCACAATGACACCCTAAGTCAGTATCAGGATGA TACATCCTCTACCTATTCAGCTGGTAGGAGAGGCTTGGATATAAATGGTTTCCCATTAAAAGCTCAATCATTTGGTGCTGCAAATGGCCGTGACCCAGAT CCTGCAACGCTGCGTAAGCCATTTTCGCCGATATCTTCTTCCAACGCATCATCGAAAGCCAATGTGCTAGAAGAAGACAATGCAGCATTGAAGAAGACAG TAAACCCACCGATCAAAGACCAGTCTTTCACCACACCAGCAAAGACTACTGCTGCGATTTCCTACATGGCTGATGAAGAAAACAGAACTCCGAAGGTTAT CCCGATGATAATGCCTGCAATTACACCTTCCACGCCGTCGATCCCAATGCAGACCGCCATGACTCCAGCAGTATTAGTAGCTCCTTCAGATCGAATTCCT TTCGGTGGTGTCAAGTTGTTCGAAGAGACGCTTCCTGAAGAAATCGAGTACTCGTTTGAAGAACGAAGAGCTGGGTTTGTGGTGCTTCCGCAGATACAAG TTTAG
AA sequence Show only first row Show all	>Lus10037691 pacid=23167351 polypeptide=Lus10037691 locus=Lus10037691.g ID=Lus10037691.BGIv1.0 annot-version=v1.0 MSPVKKDPSVQAETTCGTLLSELQIIWNEVGESDTDKDKMLFELEQECLEVYRRKVDQANRNRAHLRQAIADSEAELAAICSAMGERPVHIRQADQTSES LKAELQKILPQLEEMQKRKVDRRNQFVQVLEEIRKISYEINEKADDGSANESDISLRKLEELHKKLQVLQTEKNDRLKQVQEYLDAINSLCLVLGMDSMQ TISEIYPEPSNSDISKRISNDSIKILATAIHRLREVKLQRMQKLQDLATAMLELWNLMDTPIEEQQRFQNVTCNIAAAEHEITEPNTLSLDFINFVGAEV SRLEELKISKMRELVLKKRSELEEVCRKTHMIPQANTALDCAIEAIESGQVDPSSILEQIEFQVANVKEEAFSRKEILDKVEKWRAACEEESWLEEYNRD DNRYNAGRGTHLILKRAEKARALVTKIPGMVEGLASKTMAWEKERGIEFLYDGIRLLSMLEENTILRQEKEEDKRRQRDQKKLQGQLIAEQEALYGSKPS PSKNLSMKKGSRVSMGGAGSVSNRRLSVGGAVPQTPKLDKTLSSRTLNCRSAKKINHNDTLSQYQDDTSSTYSAGRRGLDINGFPLKAQSFGAANGRDPD PATLRKPFSPISSSNASSKANVLEEDNAALKKTVNPPIKDQSFTTPAKTTAAISYMADEENRTPKVIPMIMPAITPSTPSIPMQTAMTPAVLVAPSDRIP FGGVKLFEETLPEEIEYSFEERRAGFVVLPQIQV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G51600		ATMAP65-3, PLE	PLEIADE, ARABIDOPSIS THALIANA ...		Lus10037691 [exp]	0	1
AT3G06030		AtANP3, MAPKKK1...	NPK1-related protein kinase 3 ...		Lus10010519 [exp]	1.4	0.9777
AT4G01730			DHHC-type zinc finger family p...		Lus10009971 [exp]	1.7	0.9683
AT5G51600		ATMAP65-3, PLE	PLEIADE, ARABIDOPSIS THALIANA ...		Lus10015684 [exp]	2.8	0.9776
AT5G66230			Chalcone-flavanone isomerase f...		Lus10014261 [exp]	3.5	0.9683
AT4G09060			unknown protein		Lus10036467 [exp]	3.7	0.9652
AT1G03470			Kinase interacting (KIP1-like)...		Lus10040904 [exp]	5.1	0.9625
AT4G09060			unknown protein		Lus10041137 [exp]	5.4	0.9507
AT4G14330			P-loop containing nucleoside t...		Lus10011804 [exp]	6.9	0.9654
AT4G01730			DHHC-type zinc finger family p...		Lus10038029 [exp]	7.7	0.9641
AT1G72250			Di-glucose binding protein wit...		Lus10013714 [exp]	7.7	0.9659

Compare expression of checked genes

Lus10037691 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.