Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016903 [exp] 278 / 1e-96 ND 36 / 0.006
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10037765 pacid=23167145 polypeptide=Lus10037765 locus=Lus10037765.g ID=Lus10037765.BGIv1.0 annot-version=v1.0 ATGGTGGGAGCAAGAACAACGAAGACGAGCTTTTCGCTGGAGGAGTATGAAGTTTTCCTCGAGAATCCGTACATGTCAAAATTCAGCATCCCACAGCTTA ATCAGATTCAGGTGTTTAATGTGATTAGCACGATTGATTTGGCGAAGCCGTACCGCTCGACGCTCCAAGACGACGATGATTACGGCGGCGTGTACATTCA GCCCGGCAATTTCTCACTGTCGTCCGGCCAAGTGAAGCGAGATCTCGAAGATCTCAACTGCCAGGAATGCTATATTCACACCATGGAGACGACCAGTCCA GCCGCTCCTGAGAAGAACAGAGTTCCGAACGTATCTGTCCCGAAGGATTTCCTGGCATCGATGGAGTTGCCGATCACCCGCCGGAGCAGGAGTCAGAAGA GGAAGAAAAGATGTTTCGTGAATGCCGTCGGCGAAGATTCCGCCGTCGCCGGAGGTGATTACCCCCTTGGTGTACAAGGAGCTGCTGACGCCACTGCTGC TGCTGCAGTAAAAGCAGTAGCAGACGCGGGGTGTACTTCTCTGTACGTGGACACGTATCGCTGGGGGCTATGA
AA sequence Show only first row Show all	>Lus10037765 pacid=23167145 polypeptide=Lus10037765 locus=Lus10037765.g ID=Lus10037765.BGIv1.0 annot-version=v1.0 MVGARTTKTSFSLEEYEVFLENPYMSKFSIPQLNQIQVFNVISTIDLAKPYRSTLQDDDDYGGVYIQPGNFSLSSGQVKRDLEDLNCQECYIHTMETTSP AAPEKNRVPNVSVPKDFLASMELPITRRSRSQKRKKRCFVNAVGEDSAVAGGDYPLGVQGAADATAAAAVKAVADAGCTSLYVDTYRWGL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10037765 [exp]	0	1
AT5G45650			subtilase family protein (.1)		Lus10020458 [exp]	2.8	0.8684
AT4G02900			ERD (early-responsive to dehyd...		Lus10000660 [exp]	3.0	0.8420
AT3G23750			Leucine-rich repeat protein ki...		Lus10023220 [exp]	6.2	0.7676
AT3G54200			Late embryogenesis abundant (L...		Lus10018361 [exp]	6.5	0.8652
AT3G53540			unknown protein		Lus10025296 [exp]	16.9	0.8276
AT1G01420		UGT72B3	UDP-glucosyl transferase 72B3 ...		Lus10001905 [exp]	20.1	0.8091
AT5G10140	MADS	FLF, AGL25, FLC	FLOWERING LOCUS F, FLOWERING L...		Lus10003123 [exp]	22.0	0.7412
AT1G02335		GL22	germin-like protein subfamily ...		Lus10004857 [exp]	22.5	0.7870
AT3G11170		AtFAD7, FADD, F...	FATTY ACID DESATURASE D, fatty...		Lus10038321 [exp]	23.9	0.7538
AT5G48380		BIR1	BAK1-interacting receptor-like...		Lus10036704 [exp]	25.8	0.7804

Compare expression of checked genes

Lus10037765 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.