Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G51980 592 / 0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G16480 585 / 0 MPPALPHA mitochondrial processing peptidase alpha subunit (.1) AT3G02090 168 / 7e-46 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025839 [exp] 906 / 0 AT1G51980 643 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10035000 [exp] 632 / 0 AT1G51980 631 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10012926 [exp] 531 / 0 AT3G16480 504 / 3e-173 mitochondrial processing peptidase alpha subunit (.1) Lus10004939 [exp] 169 / 2e-46 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 169 / 4e-46 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 168 / 9e-46 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004938 [exp] 103 / 2e-24 AT3G02090 546 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10012918 [exp] 44 / 0.0003 AT5G56730 1501 / 0.0 Insulinase (Peptidase family M16) protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G191100 [exp] 722 / 0 AT1G51980 620 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.008G193200 [exp] 612 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.010G036700 [exp] 608 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 166 / 3e-45 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.004G118900 [exp] 163 / 3e-44 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10038262 pacid=23158332 polypeptide=Lus10038262 locus=Lus10038262.g ID=Lus10038262.BGIv1.0 annot-version=v1.0 ATGTACAGAAGCGCAGCTTCACGGCTCAGGGCTCTCAAGGGCCGCGTGGGCAATGTGGGTACCACGAGATATGCAACTTCAAGTGCAGTTGCTGCTACGA CGTCATCCCCGGGACTTTTCAGCTGGCTGATTGGTGAACGGTCTAGTTCCTTTCCTCCTTTGACTTCTCCATTTGAAGGTGTTTCTTCCCCACAATCATT GCCGGATTACGTTGAACCAAGCAAGATTACGTCAAAAGCCCTTTCTAATGGACTGACAATTGTTTCCGAGGCTTCTTCGCATCCTGCAGCATCAATAGGG ATGTACGTTGATTGCGGTTCTATCTACGAGACACCTGTGTCCTGTGGAGCAACTCACTTGCTTGAAAGAATGGCATTCAAAAGCACTAGAAATAGGAGTC ACTTTCGCATTGTGAGGGAAGTTGAGGCCATTGGTGGTACTATAGCAGCCTCGGCTTCACGGGAGCAAATTGGATACACTTTTGATGCCCTTAAAACCTA TGTTCCCGAAATGGTGGAATTGCTCATTGACTCTGTGAGGAATCCTGTCTTCATTGATTGGGAAGTCACCGAGGAGCTGAAAAGGGTGAAGGATGAACTC AGCCAAATCTCTAACAATCCCCAAGGCTTACTCTTGGAGGCAATTCATTCTGCTGGATATATTGGTGCATTGGCAAATCCTCTTTTAGCTCCAGAAGAAG CATTGAGCAGACTGAATAGTGACATTTTGGAGGAATTTGTGGCTGAGCATTACACAGCTCCTAGGATGATCCTTGCTGCATCAGGGGTTGAATTCGAGGA GCTTTTATCTGTTGCAGAGCCACTTCTGTCTGACCTTCCAGTTGTCCAACGTCCCGAGGCACCAAAATCTCAATATGTTGGAGGGGATTATCGTCGCCAG GCAGATTTACCGGTGACACATATTGCTCTTGCTTTTGAAGTACCTGGAGGCTGGCATAACGAAAAAGAAGCTATCATTTTAACTGTGCTCCAGATGCTTA TGGGAGGAGGTGGCTCGTTTTCTGCTGGGGGGCCAGGAAAAGGAATGCACTCACGATTATATCTCCGTGTCTTGAATAACTACCAGCAGCTTCAGTCTTT TTCTGCATTCAACAGCATCTTCAATGATACTGGATTGTTTGGCATTTATGCCACCACTACATCTGATTTTGTGGCGAAGGCAGTTGATATCGCCGCAGGA GAATTGCTTTCCATTGCCTCTCCAAAACAAGTTACTGAGACGCAGCTTAACCGTGCAAAGGAGGCCACAAAATCTGCAGTTCTTATGAATCTGGAGTCTA GAATGATTGTAGCTGAAGATATTGGGAGGCAGTACTTGACATATGGTGAAAGGAAGCCGGTGGATCATTTCTTGAAGATGGTGGATGAGATAACGTTGAA GGACATAAGTGATATTGGACAGAAGTTGATCTCCTCACCTCTAACAATGGCGTCATATGGCGACGTCATCAACGTCCCCAGCTACGGGTCAGTAAGTGCG ATGTTCCATTCAAAATGA
AA sequence Show only first row Show all	>Lus10038262 pacid=23158332 polypeptide=Lus10038262 locus=Lus10038262.g ID=Lus10038262.BGIv1.0 annot-version=v1.0 MYRSAASRLRALKGRVGNVGTTRYATSSAVAATTSSPGLFSWLIGERSSSFPPLTSPFEGVSSPQSLPDYVEPSKITSKALSNGLTIVSEASSHPAASIG MYVDCGSIYETPVSCGATHLLERMAFKSTRNRSHFRIVREVEAIGGTIAASASREQIGYTFDALKTYVPEMVELLIDSVRNPVFIDWEVTEELKRVKDEL SQISNNPQGLLLEAIHSAGYIGALANPLLAPEEALSRLNSDILEEFVAEHYTAPRMILAASGVEFEELLSVAEPLLSDLPVVQRPEAPKSQYVGGDYRRQ ADLPVTHIALAFEVPGGWHNEKEAIILTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNNYQQLQSFSAFNSIFNDTGLFGIYATTTSDFVAKAVDIAAG ELLSIASPKQVTETQLNRAKEATKSAVLMNLESRMIVAEDIGRQYLTYGERKPVDHFLKMVDEITLKDISDIGQKLISSPLTMASYGDVINVPSYGSVSA MFHSK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G51980			Insulinase (Peptidase family M...		Lus10038262 [exp]	0	1
AT2G20420			ATP citrate lyase (ACL) family...		Lus10003620 [exp]	2.0	0.9584
AT2G04400			Aldolase-type TIM barrel famil...		Lus10006354 [exp]	3.0	0.9627
AT5G07350		TSN1, AtTudor1	Arabidopsis thaliana TUDOR-SN ...		Lus10043020 [exp]	3.5	0.9583
AT5G67500		VDAC2, ATVDAC2	ARABIDOPSIS THALIANA VOLTAGE D...		Lus10007739 [exp]	4.9	0.9555
AT2G34590			Transketolase family protein (...		Lus10023304 [exp]	5.0	0.9433
AT5G14030			translocon-associated protein ...		Lus10012565 [exp]	5.9	0.9393
AT2G47470		ATPDI11, ATPDIL...	UNFERTILIZED EMBRYO SAC 5, MAT...		Lus10010274 [exp]	7.4	0.9343
AT5G38830			Cysteinyl-tRNA synthetase, cla...		Lus10034343 [exp]	7.9	0.9490
AT1G16300		GAPCP-2	glyceraldehyde-3-phosphate deh...		Lus10000872 [exp]	9.2	0.9508
AT3G56130			biotin/lipoyl attachment domai...		Lus10040959 [exp]	11.0	0.9524

Compare expression of checked genes

Lus10038262 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.