Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G14180 381 / 2e-130 MPL1 Myzus persicae-induced lipase 1 (.1) AT2G15230 293 / 2e-96 ATLIP1 lipase 1 (.1) AT1G73920 91 / 1e-19 alpha/beta-Hydrolases superfamily protein (.1.2) AT1G18460 80 / 7e-16 alpha/beta-Hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038378 [exp] 743 / 0 AT5G14180 377 / 2e-129 Myzus persicae-induced lipase 1 (.1) Lus10015159 [exp] 405 / 1e-139 AT5G14180 409 / 2e-141 Myzus persicae-induced lipase 1 (.1) Lus10031523 [exp] 402 / 9e-139 AT5G14180 410 / 1e-141 Myzus persicae-induced lipase 1 (.1) Lus10022349 [exp] 385 / 2e-131 AT5G14180 527 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10023171 [exp] 382 / 7e-131 AT5G14180 358 / 3e-121 Myzus persicae-induced lipase 1 (.1) Lus10015158 [exp] 376 / 3e-128 AT5G14180 351 / 2e-118 Myzus persicae-induced lipase 1 (.1) Lus10041571 [exp] 373 / 2e-126 AT5G14180 525 / 0.0 Myzus persicae-induced lipase 1 (.1) Lus10031524 [exp] 362 / 1e-122 AT5G14180 359 / 2e-121 Myzus persicae-induced lipase 1 (.1) Lus10002808 [exp] 316 / 2e-103 AT2G15230 551 / 0.0 lipase 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G159900 [exp] 508 / 2e-180 AT5G14180 421 / 9e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159800 [exp] 506 / 1e-179 AT5G14180 422 / 3e-146 Myzus persicae-induced lipase 1 (.1) Potri.014G159700 [exp] 452 / 1e-158 AT5G14180 441 / 5e-154 Myzus persicae-induced lipase 1 (.1) Potri.001G332300 [exp] 393 / 4e-135 AT5G14180 533 / 0.0 Myzus persicae-induced lipase 1 (.1) Potri.017G069700 [exp] 314 / 2e-104 AT5G14180 374 / 4e-128 Myzus persicae-induced lipase 1 (.1) Potri.009G094900 [exp] 304 / 3e-100 AT2G15230 564 / 0.0 lipase 1 (.1) Potri.012G060600 [exp] 88 / 2e-18 AT1G73920 917 / 0.0 alpha/beta-Hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF04083 [flax] [poplar] Abhydro_lipase Partial alpha/beta-hydrolase lipase region
Representative CDS sequence Show only first row Show all	>Lus10038401 pacid=23158109 polypeptide=Lus10038401 locus=Lus10038401.g ID=Lus10038401.BGIv1.0 annot-version=v1.0 ATGGCTAAACCTTCACTAACTTCAGTTATGTTGATGTTGGTCCTGTTATTAACAGCCATCACATATGCATCAGCATGGACAAGTCAGCACAGAAAATTTG GACTACTTGATCATTGGGATGATGCTGATGCTGATGCTGGAATTTGCAAATCAATGGTCCAACCACAAGGCTATGCATGTGAAGAACATCTGGTAACAAC AGAAGACGGCTACATACTTGGAATCCAGAGAATGCAAGTTTCTCGATCGGGCAAGACTGCTTACAAACCACCAGTCCTTGTACAGCACGGATTATTCAGC GATGGTGCATCATGGATGATCAATGGCCCTGATGAATCCTTGCCATTCATATTGGTCGATAACGGCTACGACGTGTGGATTTCGAACACCCGTGGCACTG TACCCAGCCAAGGACACACATCACTTTCCCCAAACGATGGAGCATATTGGGAGTGGTCATGGGATCAATTAGCTGCTTATGATCTTCCTGCACTGTTCCA CTATGTGTTTGATCACACAGGCCAGAAACATCACTACATTGCACATTCCTTGGGAACATTGACAGCCTTAGCTGCATTTTCACAAGGGGACTTGTTCAAC ATGACACGGTCGGCTGCTCTGCTTTGTCCAATCGCTCACCTTAATCACATCACATCCCCCGCCAAAATCGCTGCCGATTTGTACATAGCAGAGGATCTTT ACGGGCTAGGGTTGCGCGAATTTGAACAGGGAGGGTTGGCCTTTTCCAAGTTCCTAAAGGGTGTATGTAGTCAACCTGGGATCAACTGCTCGGACTTGAT AACTACCTTCACAGGAGGCAACTGTTGTGTGAATACCTCGAGGATCGACGAGTTTCTCGACAATGAGCCTCAAGCTACATCAGTGAAGAACATAGTCCAT CTATCCCAGATGATGAGAAAGGGAACCATCACAAAGTATGACTATGGAAGTGAAGATGCAAATACGGACCATTATGGGCAGCCGAATCCTCCAGTTTACA ACATGTCAATGATTCAGAGCTCTTTCCCTCTCTTCTTTGGTTATGGAGGCCAAGACAAGCTCTCTGACGTGGACGACATGCAAATCCTGATAGACAACCT TAAAGATCACGACCAAGACAAGCTGGTTCTTCACTTTGTTGACTACTATTCCCATACAGATTTTGTGTTTGGAGTCAACGCCAGTGTCGTCGTATATGAT CCAATCATGGACTTCTTCAACCTCAACTAG
AA sequence Show only first row Show all	>Lus10038401 pacid=23158109 polypeptide=Lus10038401 locus=Lus10038401.g ID=Lus10038401.BGIv1.0 annot-version=v1.0 MAKPSLTSVMLMLVLLLTAITYASAWTSQHRKFGLLDHWDDADADAGICKSMVQPQGYACEEHLVTTEDGYILGIQRMQVSRSGKTAYKPPVLVQHGLFS DGASWMINGPDESLPFILVDNGYDVWISNTRGTVPSQGHTSLSPNDGAYWEWSWDQLAAYDLPALFHYVFDHTGQKHHYIAHSLGTLTALAAFSQGDLFN MTRSAALLCPIAHLNHITSPAKIAADLYIAEDLYGLGLREFEQGGLAFSKFLKGVCSQPGINCSDLITTFTGGNCCVNTSRIDEFLDNEPQATSVKNIVH LSQMMRKGTITKYDYGSEDANTDHYGQPNPPVYNMSMIQSSFPLFFGYGGQDKLSDVDDMQILIDNLKDHDQDKLVLHFVDYYSHTDFVFGVNASVVVYD PIMDFFNLN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G14180		MPL1	Myzus persicae-induced lipase ...		Lus10038401 [exp]	0	1

Compare expression of checked genes

Lus10038401 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.