Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47635 107 / 4e-29 Pollen Ole e 1 allergen and extensin family protein (.1) AT2G40113 87 / 2e-21 Pollen Ole e 1 allergen and extensin family protein (.1) AT4G17215 75 / 6e-17 Pollen Ole e 1 allergen and extensin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039078 [exp] 337 / 9e-119 AT5G47635 114 / 4e-32 Pollen Ole e 1 allergen and extensin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G005600 [exp] 183 / 2e-58 AT5G47635 120 / 8e-35 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.016G006200 [exp] 176 / 2e-55 AT5G47635 117 / 2e-33 Pollen Ole e 1 allergen and extensin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0287 [flax] [poplar] Transthyretin PF01190 [flax] [poplar] Pollen_Ole_e_1 Pollen protein Ole e 1 like
Representative CDS sequence Show only first row Show all	>Lus10038781 pacid=23150390 polypeptide=Lus10038781 locus=Lus10038781.g ID=Lus10038781.BGIv1.0 annot-version=v1.0 ATGAGCTACTTCACCGGCAGCCACCACCACCACCACCACCTTCTCCTCTTCACCCTCTTCTTCATTAATGTTCTGGCCGCGGCCGGAGATCATTATCGTG TTGGTTCCGACATGTCGGGAATATCGGGGGCTGGCAGCAGGGAGGAAATGGTGGAGTTGGCTGGTTATGGTGAAGAGAAGCTCTCAACCGTTCTTATAAC CGGTTCTGTTGTTTGCCAGGCTTGCTCTAGTTCTGTTCATCATCATGACCAGCTCCATGAATGGCCAGTTCCAGGTGCTGTGGTGGCTGTCAACTGCAGA AGGAAGAAGAAGCATAGGAAGTCAACAACTCATGCACGGACTGTCACGGACGAGTATGGCGATTTCATGATCGATCTTCCTTCGGAGCTACACGGCATTG CTGACTTCGACAAGATGTGCTGTGTCGAGGTTCAGAGGATGCCAAAGGAGTCTGCTTGCAGACCGGCTTATGTCCAGAATAAGCACAAGTCCCTGAAGCT GTCCTCTATTGGTAATGGCATCCGCAACTACTCTGCTGGCAAAATACAGTTCCTGCATACGACTTCTAAACCTCTGCAAACATGTGGCTTTAAGAGCACT CACAGCAGTGGTAAAGAGATGATCTTTTCGATTTCCAAAGTTACCGAGCACAGCAGGAGATGA
AA sequence Show only first row Show all	>Lus10038781 pacid=23150390 polypeptide=Lus10038781 locus=Lus10038781.g ID=Lus10038781.BGIv1.0 annot-version=v1.0 MSYFTGSHHHHHHLLLFTLFFINVLAAAGDHYRVGSDMSGISGAGSREEMVELAGYGEEKLSTVLITGSVVCQACSSSVHHHDQLHEWPVPGAVVAVNCR RKKKHRKSTTHARTVTDEYGDFMIDLPSELHGIADFDKMCCVEVQRMPKESACRPAYVQNKHKSLKLSSIGNGIRNYSAGKIQFLHTTSKPLQTCGFKST HSSGKEMIFSISKVTEHSRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47635			Pollen Ole e 1 allergen and ex...		Lus10038781 [exp]	0	1
AT3G14920			Peptide-N4-(N-acetyl-beta-gluc...		Lus10025775 [exp]	2.2	0.9671
AT2G47180		ATGOLS1	galactinol synthase 1 (.1)		Lus10029145 [exp]	4.2	0.9602
AT5G28540		BIP1	heat shock protein 70 (Hsp 70)...		Lus10031208 [exp]	4.5	0.9578
					Lus10017305 [exp]	5.7	0.9633
AT1G21550			Calcium-binding EF-hand family...		Lus10000972 [exp]	7.3	0.9335
AT1G66240		ATX1, ATATX1	homolog of anti-oxidant 1 (.1....		Lus10043444 [exp]	8.7	0.9081
AT4G15760		MO1	monooxygenase 1 (.1.2)		Lus10028081 [exp]	9.5	0.9415
AT5G47635			Pollen Ole e 1 allergen and ex...		Lus10039078 [exp]	10.0	0.9337
AT2G42005			Transmembrane amino acid trans...		Lus10026549 [exp]	10.0	0.9553
AT1G72610		ATGER1, GLP1	A. THALIANA GERMIN-LIKE PROTEI...		Lus10015646 [exp]	10.4	0.9462

Compare expression of checked genes

Lus10038781 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.