Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G74030 794 / 0 ENO1 enolase 1 (.1) AT2G36530 600 / 0 ENO2, LOS2 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) AT2G29560 475 / 4e-165 ENOC cytosolic enolase (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027255 [exp] 872 / 0 AT1G74030 799 / 0.0 enolase 1 (.1) Lus10015028 [exp] 596 / 0 AT2G36530 802 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038904 [exp] 592 / 0 AT2G36530 792 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10002844 [exp] 589 / 0 AT2G36530 800 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10003374 [exp] 585 / 0 AT2G36530 799 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10035579 [exp] 555 / 0 AT2G36530 775 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10008647 [exp] 504 / 3e-174 AT2G36530 687 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10040711 [exp] 460 / 9e-159 AT2G29560 789 / 0.0 cytosolic enolase (.1) Lus10016447 [exp] 411 / 2e-139 AT2G29560 713 / 0.0 cytosolic enolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G057500 [exp] 798 / 0 AT1G74030 810 / 0.0 enolase 1 (.1) Potri.006G116800 [exp] 603 / 0 AT2G36530 814 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.015G131100 [exp] 600 / 0 AT2G36530 811 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.009G040700 [exp] 489 / 8e-171 AT2G29560 809 / 0.0 cytosolic enolase (.1) Potri.012G129300 [exp] 199 / 2e-61 AT2G36530 260 / 1e-85 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0227 [flax] [poplar] Enolase_N PF03952 [flax] [poplar] Enolase_N Enolase, N-terminal domain CL0256 [flax] [poplar] Enolase_TIM PF00113 [flax] [poplar] Enolase_C Enolase, C-terminal TIM barrel domain
Representative CDS sequence Show only first row Show all	>Lus10038963 pacid=23150592 polypeptide=Lus10038963 locus=Lus10038963.g ID=Lus10038963.BGIv1.0 annot-version=v1.0 ATGGCGTTCACCACTCACGCAGCGGCCACCGCCACCATTTTCAAAACCTCTTCCGCCTTCACGACCTCCAAACTCAAAACCTCCTCCTCCTCGACGAAGC CTCGCGGCTTTGTCGTCCGCAACTCCGTTTCCGCCGTAGCTCCGGCTACCAGTCTCGTCAGCTCCTCCACGGTCAAGTCCGTGAAGGCGAGGCAGATCAT CGACAGCAGAGGCAACCCTACCGTCGAGGTCGATCTCTTCACAGGCGACGGCTCCCTCTACCGATCCGCCGTCCCCAGCGGCGCATCCACCGGGATCTAC GAGGCTCTCGAGCTGCGCGACGGAGACAAGTGCGTCTACGGAGGTAAAGGCGTGCTCACTGCTGTTGGCAACATCAACGACGTCCTCGGACCTAAGCTCA TCGGGATTGATGTTAGGAACCAAGGTGATGTTGATGGAGTTATGCTGGACATTGATGGAACACCGAACAAGTCACAGCTCGGAGCCAATGCGATCTTGGG AGTCTCTCTCAGTGTCTGCAGAGCAGGAGCAGGAGCCAAAGGGATTCCATTGTATAAACACATCCAGGAATTGGCAGGAACTAAGGAGCTCGTTATGCCA GTCCCTGCTTTCAATGTGATCAATGGTGGCAGTCATGCCGGAAATGCATTGGCTATGCAGGAGTTCATGATCTTGCCTGTTGGTGCTTCCTCCTTCGCTG AGGCCCTCCGTATGGGTAGTGAAGTTTACCATACACTGAAGGGAATCATCAAATCGAAATACGGGCAAGATGCTTGCAATGTTGGCGATGAAGGTGGGTT TGCTCCCAACGTCCAAGACAATAGAGAAGGGCTTGTTCTTCTGATGGATGCAATTGAGAAGGCTGGTTATACCGGAAAGATCAAGATAGGAATGGATGTT GCTGCTTCGGAATTCTTCATGAAAGATGGAAGGTACGATTTGAACTTCAAGAACCAGCCGAACGATGGAGCGCACGTGCTAGCAGCTCAGAGCCTCGGTG ACCTCTACAAAGAATTCATCAGGGACTTCCCTATCGTGTCCATCGAAGATCCTTTCGACCAGGATGACTGGAGCTCGTGGGCTTCACTGCAGTCATCCGT TGACATCCAGCTTGTTGGAGATGATTTGTTGGTCACAAACCCGACGAGAATTGCTGAAGCTATTGGCAAGAAGTCTTGCAATGGTCTACTTCTCAAGGTG AACCAGATTGGCACAGTCACAGAATCGATCAAGGCAGCCCTTGACTCGAAAGCTGCAGGGTGGGGAGTGATGGTTAGCCACCGAAGCGGTGAAACTGAAG ACAATTTCATTGCTGATCTCGCTGTTGGGCTAGCCAGTGGACAGATCAAAACCGGAGCTCCTTGCAGAAGTGAGCGATTGGCCAAATACAACCAGCTGCT GCGCATTGAAGAGGAGCTTGGAAGTGTTCGCTACGCTGGCGAAGCATTTCGATCTCCTTAA
AA sequence Show only first row Show all	>Lus10038963 pacid=23150592 polypeptide=Lus10038963 locus=Lus10038963.g ID=Lus10038963.BGIv1.0 annot-version=v1.0 MAFTTHAAATATIFKTSSAFTTSKLKTSSSSTKPRGFVVRNSVSAVAPATSLVSSSTVKSVKARQIIDSRGNPTVEVDLFTGDGSLYRSAVPSGASTGIY EALELRDGDKCVYGGKGVLTAVGNINDVLGPKLIGIDVRNQGDVDGVMLDIDGTPNKSQLGANAILGVSLSVCRAGAGAKGIPLYKHIQELAGTKELVMP VPAFNVINGGSHAGNALAMQEFMILPVGASSFAEALRMGSEVYHTLKGIIKSKYGQDACNVGDEGGFAPNVQDNREGLVLLMDAIEKAGYTGKIKIGMDV AASEFFMKDGRYDLNFKNQPNDGAHVLAAQSLGDLYKEFIRDFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPTRIAEAIGKKSCNGLLLKV NQIGTVTESIKAALDSKAAGWGVMVSHRSGETEDNFIADLAVGLASGQIKTGAPCRSERLAKYNQLLRIEEELGSVRYAGEAFRSP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G74030		ENO1	enolase 1 (.1)		Lus10038963 [exp]	0	1
AT1G74030		ENO1	enolase 1 (.1)		Lus10027255 [exp]	1.0	0.9463
AT4G24830			arginosuccinate synthase famil...		Lus10013207 [exp]	3.2	0.8984
AT2G19860		ATHXK2	ARABIDOPSIS THALIANA HEXOKINAS...		Lus10025815 [exp]	3.3	0.8953
AT1G08280			Glycosyltransferase family 29 ...		Lus10019538 [exp]	3.5	0.9263
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10002844 [exp]	3.7	0.9359
AT2G36530		ENO2, LOS2	LOW EXPRESSION OF OSMOTICALLY ...		Lus10003374 [exp]	4.2	0.9307
AT5G49460		ACLB-2	ATP citrate lyase subunit B 2 ...		Lus10016910 [exp]	4.6	0.9036
AT4G21215			unknown protein		Lus10006757 [exp]	5.9	0.8664
AT5G33320		ARAPPT, CUE1	PHOSPHOENOLPYRUVATE/PHOSPHATE ...		Lus10002385 [exp]	7.7	0.8726
AT1G02570			unknown protein		Lus10025023 [exp]	8.5	0.8774

Compare expression of checked genes

Lus10038963 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.