Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G05675 344 / 2e-114 UDP-Glycosyltransferase superfamily protein (.1) AT1G05680 340 / 5e-113 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31790 329 / 1e-108 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 317 / 6e-104 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G43820 298 / 8e-97 SGT1, ATSAGT1, GT, UGT74F2 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) AT1G24100 297 / 4e-96 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT2G43840 295 / 2e-95 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2) AT4G15480 227 / 9e-69 UGT84A1 UDP-Glycosyltransferase superfamily protein (.1) AT1G05530 226 / 1e-68 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT3G21560 226 / 4e-68 UGT84A2 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010468 [exp] 533 / 0 AT1G05675 368 / 7e-124 UDP-Glycosyltransferase superfamily protein (.1) Lus10003809 [exp] 510 / 2e-179 AT1G05675 337 / 1e-111 UDP-Glycosyltransferase superfamily protein (.1) Lus10024117 [exp] 407 / 2e-138 AT1G05675 385 / 4e-130 UDP-Glycosyltransferase superfamily protein (.1) Lus10024118 [exp] 404 / 2e-137 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1) Lus10008742 [exp] 364 / 4e-122 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10017825 [exp] 355 / 1e-118 AT2G43840 392 / 2e-133 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006721 [exp] 348 / 2e-116 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006352 [exp] 346 / 5e-115 AT2G43820 414 / 6e-142 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10006353 [exp] 345 / 9e-115 AT2G43820 398 / 1e-135 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.004G179300 [exp] 413 / 3e-141 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.007G140300 [exp] 409 / 8e-140 AT1G05680 457 / 4e-159 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032300 [exp] 396 / 1e-134 AT1G05675 465 / 6e-162 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G032700 [exp] 390 / 2e-132 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032733 [exp] 390 / 2e-132 AT1G05680 444 / 6e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.017G032500 [exp] 388 / 1e-131 AT1G05680 446 / 1e-154 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.001G389200 [exp] 353 / 8e-118 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 345 / 8e-115 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.014G175000 [exp] 340 / 5e-113 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2) Potri.007G140500 [exp] 318 / 2e-104 AT2G43840 463 / 3e-161 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10039041 pacid=23150322 polypeptide=Lus10039041 locus=Lus10039041.g ID=Lus10039041.BGIv1.0 annot-version=v1.0 ATGAAGATGTCGTCGGAGCAACCGAAGCCTCACGTCGTAGTAATGCCGTGGGCAGCACAAGGCCATCTCAACCCGGCCTTCCAATTCTCCCGAAAACTCG TCTCGAAAGGCCTAGCCGTCACCTTACTAACATTCACCGACGAAAAAATCACCCAAGTCGCCGCCGGCGGGACGGAGTCCGTGGCCGTGGAGGTGATCTC CGACCGGGGACTCCTGGCCAACGCCGACGGGAACTTCCTCGCCAACCACCGGAAGCTCGTGGAGGTCGAGCTTTCCGAGTTCGTGGGCAGGCAGACGGTC AGGCCGTGTTGCCTGGTGTACGACTCGATCATGCCGTGGGCGGTGGGGATAGCGAGGGAGCTTGGGATGGTCGGGGCGGCGTTCTTCACTCAGCCGGCGG CGGTGAACGGTGTGTTCTTGGAGGTGATGGAAGGGAGGATTGGGGTTCCTCCCGAGAAAGGGATGGTTACGGAGGTGGAGGGATGGCCGGCGGCGATGGA GGTTTGTGATTTGCCGTCGTTTGTGTCCGACGTCTTGGATAGTCCAAGTCGTCGGATGGGGTTGGAGATGATGGCGGGACAGTTTTCAACGGCTAGGGAA GCTGATTGGGTGTTTTGCAATACCTTTTATACCCTTGAGGAAAAGATGCTTAACTGGATGACCACACAATCGATTCAGATGAAGCCGGTGGGCCCAACAA TCCCATCATCCTACGTAGGCAAAGAAGGCCCAACCCAAACGAACTCCAACTATGGGCTCAGCCTCTTCAACCCAAATAGTCCACAAACCTCCATCACCCA GTGGCTCGACTCTAAACCACCCAGTTCGGTCATCTACGCCTCAATGGGCAGTGTATCCAACATCTCTCAAACCCAAACCTCGGAACTTGCCCAAGCCCTC CAACTCAGCACCCACCCTTTCATCTGGGTGGTCAGGAAAACCGAACAAGACAAGCTCCCACCAAAGTTCATTTCCGAAACTACATCGGGCTTGATAGTTG ACTGGTGCAACCAATTAGACGTCTTGGCCCACCCTTCCGTCGGATGTTTCGTAACTCATTGCGGGTGGAACTCAACCCTCGAAGCACTCTGTCTTGGTGT ACCAATGGTTGCAATTCCCGTATGGGCTGATCAGCCCACAAACGCAAAGTTCGTGGCAGATGTTTGGTATGTGGGTGCACGTGCCAGAGCTGACATAGCA AAAGATATGATGACTAAAGAAGAGATCGGAGACCGAATCGTTGAAGTTATGGAGGGGGAGAGTGGCGACAAGATACGAAGGAATGCGAAGAAGTGGAGTG CATTGGCGAAGGAAGCCATAGGTGATCGTGGGAGTTCGGAAAGGAACGTTCAAGAGTTTGTGACAGCACTTGTTCATGGTCGCTTAGCTTAG
AA sequence Show only first row Show all	>Lus10039041 pacid=23150322 polypeptide=Lus10039041 locus=Lus10039041.g ID=Lus10039041.BGIv1.0 annot-version=v1.0 MKMSSEQPKPHVVVMPWAAQGHLNPAFQFSRKLVSKGLAVTLLTFTDEKITQVAAGGTESVAVEVISDRGLLANADGNFLANHRKLVEVELSEFVGRQTV RPCCLVYDSIMPWAVGIARELGMVGAAFFTQPAAVNGVFLEVMEGRIGVPPEKGMVTEVEGWPAAMEVCDLPSFVSDVLDSPSRRMGLEMMAGQFSTARE ADWVFCNTFYTLEEKMLNWMTTQSIQMKPVGPTIPSSYVGKEGPTQTNSNYGLSLFNPNSPQTSITQWLDSKPPSSVIYASMGSVSNISQTQTSELAQAL QLSTHPFIWVVRKTEQDKLPPKFISETTSGLIVDWCNQLDVLAHPSVGCFVTHCGWNSTLEALCLGVPMVAIPVWADQPTNAKFVADVWYVGARARADIA KDMMTKEEIGDRIVEVMEGESGDKIRRNAKKWSALAKEAIGDRGSSERNVQEFVTALVHGRLA

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G05675			UDP-Glycosyltransferase superf...		Lus10039041 [exp]	0	1
AT5G15240			Transmembrane amino acid trans...		Lus10005239 [exp]	4.0	0.8221
AT1G16760			Protein kinase protein with ad...		Lus10042205 [exp]	4.2	0.8395
AT2G26710		CYP72B1, CYP734...	PHYB ACTIVATION TAGGED SUPPRES...		Lus10019177 [exp]	7.7	0.8327
AT2G01060	GARP		myb-like HTH transcriptional r...		Lus10002483 [exp]	10.4	0.7915
					Lus10002348 [exp]	12.7	0.7721
AT3G58040		SINAT2	seven in absentia of Arabidops...		Lus10013739 [exp]	12.8	0.8320
AT5G59590		UGT76E2	UDP-glucosyl transferase 76E2 ...		Lus10040725 [exp]	13.5	0.7911
AT3G03990			alpha/beta-Hydrolases superfam...		Lus10018686 [exp]	14.7	0.8221
AT2G39855			unknown protein		Lus10040250 [exp]	18.2	0.7710
AT5G04885			Glycosyl hydrolase family prot...		Lus10013647 [exp]	18.3	0.7614

Compare expression of checked genes

Lus10039041 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.