Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47540 517 / 0 Mo25 family protein (.1) AT4G17270 476 / 7e-170 Mo25 family protein (.1) AT2G03410 402 / 1e-140 Mo25 family protein (.1) AT5G18940 233 / 2e-74 Mo25 family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027342 [exp] 589 / 0 AT5G47540 592 / 0.0 Mo25 family protein (.1) Lus10010497 [exp] 570 / 0 AT5G47540 594 / 0.0 Mo25 family protein (.1) Lus10017565 [exp] 569 / 0 AT5G47540 593 / 0.0 Mo25 family protein (.1) Lus10036523 [exp] 391 / 2e-135 AT5G47540 446 / 1e-156 Mo25 family protein (.1) Lus10041405 [exp] 382 / 7e-132 AT5G47540 446 / 3e-157 Mo25 family protein (.1) Lus10034014 [exp] 218 / 2e-68 AT5G18940 522 / 0.0 Mo25 family protein (.1.2) Lus10012762 [exp] 206 / 2e-63 AT5G18940 512 / 0.0 Mo25 family protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G014800 [exp] 523 / 0 AT5G47540 569 / 0.0 Mo25 family protein (.1) Potri.016G011100 [exp] 519 / 0 AT5G47540 589 / 0.0 Mo25 family protein (.1) Potri.010G155400 [exp] 518 / 0 AT5G47540 588 / 0.0 Mo25 family protein (.1) Potri.019G057100 [exp] 414 / 3e-145 AT5G47540 411 / 5e-144 Mo25 family protein (.1) Potri.002G222800 [exp] 413 / 4e-145 AT5G47540 458 / 1e-162 Mo25 family protein (.1) Potri.014G162100 [exp] 412 / 9e-144 AT5G47540 461 / 1e-162 Mo25 family protein (.1) Potri.010G155300 [exp] 281 / 2e-94 AT5G47540 348 / 6e-121 Mo25 family protein (.1) Potri.010G028700 [exp] 227 / 3e-72 AT5G18940 469 / 5e-167 Mo25 family protein (.1.2) Potri.008G198900 [exp] 219 / 6e-69 AT5G18940 436 / 5e-154 Mo25 family protein (.1.2) Potri.016G011300 [exp] 197 / 8e-63 AT5G47540 262 / 1e-88 Mo25 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0020 [flax] [poplar] TPR PF08569 [flax] [poplar] Mo25 Mo25-like
Representative CDS sequence Show only first row Show all	>Lus10039045 pacid=23150362 polypeptide=Lus10039045 locus=Lus10039045.g ID=Lus10039045.BGIv1.0 annot-version=v1.0 ATGGTGGAGTTATCTAGAAATATTAGGGAGTTGAAGACGATTCTTTATGGAAATAGCGAGGCAGAACCAGTCGCTGAAGCTTGTGCACAGTTAACTCAAG AGTTCTTCAAAGAGAACACACTCCGGCTTTTCATCGTCTGTCTGCCAAAGTTAAATTTGGAGACTCGGAAAGACGCTACGCAAGTTGTTGCTAATTTACA AAGACAACAAGTTCAGTCTCGCTTAATTGCGTCTGATTATCTAGAAAACAATACAGATCTTCTCAATATTCTGATAGCTGGTTATGGAATTCCGGATATG GCTTTACACTATGGTGCAATGTTGAGGGAGTGCATACGTCACCAGAGTGTTGCACGATATGTCCTGGAGTCTGAAGAAATGAAGAAATTCTTCAATTATA TACAGCTCCCAAATTTTGATATCGCTGCTGATGCTGCTGCAACTTTCAAGGAGCTCCTAACAAGGCATAAATCTACTGTAGCTGAATTCTTGTCGAAGAA CTATGACTGGTTTTTTGCAGAATACAACTCAAAGTTGCTGGAATCTACCAACTACATAACGAGACGGCAGGCTGTCAAGCTTTTGGGTGATATATTACTG GACCGATCAAACTCGGCTGTGATGACACGATATGTGAGCTCAAGGGATAACTTAAGGATACTTATGAATCTGCTTAGAGAATCAAGCAAAAGTATCCAGA TAGAAGCATTTCATGTTTTCAAGGTGCAATCAATCTCCTTAGCTACCCCTTTGATATTCGTATCGATCTCCTTAATTGCAGTGGAGCTCATAAACTGTTT ACTGTCATGTTGTGTTCCCAAGCAGCTCTTTGCAGCCAATCAAAATAAACCTGCTGACATTGTTAGCATACTCCTAGCGAATCGAAGCAAGCTTCTTCGT CTGTTTGCGGATTTCAAGACGGAAAAAGAAGATGAACAATTTGAGGCAGACAAAGCACAGGTGGTGAGAGAAATCGCAGCACTTGAACCCAAAGACAACT GA
AA sequence Show only first row Show all	>Lus10039045 pacid=23150362 polypeptide=Lus10039045 locus=Lus10039045.g ID=Lus10039045.BGIv1.0 annot-version=v1.0 MVELSRNIRELKTILYGNSEAEPVAEACAQLTQEFFKENTLRLFIVCLPKLNLETRKDATQVVANLQRQQVQSRLIASDYLENNTDLLNILIAGYGIPDM ALHYGAMLRECIRHQSVARYVLESEEMKKFFNYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESTNYITRRQAVKLLGDILL DRSNSAVMTRYVSSRDNLRILMNLLRESSKSIQIEAFHVFKVQSISLATPLIFVSISLIAVELINCLLSCCVPKQLFAANQNKPADIVSILLANRSKLLR LFADFKTEKEDEQFEADKAQVVREIAALEPKDN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47540			Mo25 family protein (.1)		Lus10039045 [exp]	0	1
AT1G77610			EamA-like transporter family p...		Lus10042700 [exp]	3.0	0.8170
AT5G17310		AtUGP2, UGP2	UDP-glucose pyrophosphorylase ...		Lus10007370 [exp]	5.4	0.8466
AT5G48560	bHLH	bHLH078	basic helix-loop-helix (bHLH) ...		Lus10002337 [exp]	7.9	0.8246
AT5G27490			Integral membrane Yip1 family ...		Lus10031511 [exp]	11.0	0.8087
AT4G03340			Core-2/I-branching beta-1,6-N-...		Lus10033714 [exp]	12.0	0.6951
AT2G01600			ENTH/ANTH/VHS superfamily prot...		Lus10021796 [exp]	15.2	0.7863
AT5G18280		ATAPY2	apyrase 2 (.1.2)		Lus10006546 [exp]	21.6	0.8139
AT1G31070		GlcNAc1pUT1	N-acetylglucosamine-1-phosphat...		Lus10036227 [exp]	23.5	0.7850
AT2G13560		NAD-ME1	NAD-dependent malic enzyme 1 (...		Lus10018939 [exp]	24.2	0.7659
AT5G26667		PYR6	P-loop containing nucleoside t...		Lus10019509 [exp]	24.3	0.7950

Compare expression of checked genes

Lus10039045 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.