Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G47635 114 / 7e-32 Pollen Ole e 1 allergen and extensin family protein (.1) AT2G40113 94 / 4e-24 Pollen Ole e 1 allergen and extensin family protein (.1) AT4G17215 87 / 1e-21 Pollen Ole e 1 allergen and extensin family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10038781 [exp] 366 / 2e-130 AT5G47635 113 / 2e-31 Pollen Ole e 1 allergen and extensin family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G005600 [exp] 194 / 1e-62 AT5G47635 120 / 8e-35 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.016G006200 [exp] 193 / 3e-62 AT5G47635 117 / 2e-33 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.004G114300 [exp] 47 / 6e-06 AT5G15780 178 / 5e-52 Pollen Ole e 1 allergen and extensin family protein (.1) Potri.006G119100 [exp] 40 / 0.0004 AT3G09925 180 / 7e-58 Pollen Ole e 1 allergen and extensin family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0287 [flax] [poplar] Transthyretin PF01190 [flax] [poplar] Pollen_Ole_e_1 Pollen protein Ole e 1 like
Representative CDS sequence Show only first row Show all	>Lus10039078 pacid=23150424 polypeptide=Lus10039078 locus=Lus10039078.g ID=Lus10039078.BGIv1.0 annot-version=v1.0 ATGAGCTACTTCACCGGCAGCCACCACCTTCTCTTCTTCAACCTCTTCTTCTTCTTCTTCATTAATGTTCTGGCCGCGGCCGGAGATCATGATCGTGTTG GTTCCGACATGTCGGTATTATCGGGGGCAGCTAGCAGGGAGGAAATGGTGGAGTTGGCTGGGTATGGTGAAGAGAAGCTCTCAACCGTTCTTGTAACCGG TTCTGTTGTTTGCCAGGCTTGCTCTAGTACTACTGTTGATCATCAAGACCTTCACCAGCTCCATGAATGGCCAGTTCCAGGTGCTGTGGTGGCTGTCAAC TGCAGAGGCAAGAAGAAGCACAGGAAGTCAACAACTCAGGCACGGACAGTAACAGATGAGTATGGCGATTTCATTATCGATCTTCCTTCGGAGCTACACG GAATTGCTGACTTCGACAAGATGTGCTCTGTTGAGGTTCTGAGGATGCCAAAGGATTCGGCTTGCAGACCGGCTTATGTCCAGAATAAGCACAAGGCCCT GAAGCTCTCCTCATTTGGCAATGGCATCCGCAATTACTCTGCTGGCAAAATACAGTTCCTGGATACAACGTCCAAACCTCTGCAATCATGTGGTTTTAAG ACCACTCACAGCAGCGTAAAAGAGATGATCTTTTCGATTTCCAAAGTTACCAAGCACAGCAGGAGATGA
AA sequence Show only first row Show all	>Lus10039078 pacid=23150424 polypeptide=Lus10039078 locus=Lus10039078.g ID=Lus10039078.BGIv1.0 annot-version=v1.0 MSYFTGSHHLLFFNLFFFFFINVLAAAGDHDRVGSDMSVLSGAASREEMVELAGYGEEKLSTVLVTGSVVCQACSSTTVDHQDLHQLHEWPVPGAVVAVN CRGKKKHRKSTTQARTVTDEYGDFIIDLPSELHGIADFDKMCSVEVLRMPKDSACRPAYVQNKHKALKLSSFGNGIRNYSAGKIQFLDTTSKPLQSCGFK TTHSSVKEMIFSISKVTKHSRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G47635			Pollen Ole e 1 allergen and ex...		Lus10039078 [exp]	0	1
AT3G05580		TOPP9	type one protein phosphatase 9...		Lus10015192 [exp]	1.0	0.9568
AT2G30860		GLUTTR, ATGSTF7...	glutathione S-transferase PHI ...		Lus10001419 [exp]	1.4	0.9370
AT5G47810		PFK2	phosphofructokinase 2 (.1)		Lus10008812 [exp]	3.5	0.9258
AT2G37740	C2H2ZnF	ATZFP10, ZFP10	zinc-finger protein 10 (.1)		Lus10024875 [exp]	4.6	0.9241
AT5G43150			unknown protein		Lus10010543 [exp]	4.9	0.9188
AT5G10930		CIPK5, SnRK3.24	SNF1-RELATED PROTEIN KINASE 3....		Lus10041653 [exp]	4.9	0.9365
AT1G66240		ATX1, ATATX1	homolog of anti-oxidant 1 (.1....		Lus10043444 [exp]	5.7	0.8987
AT5G35090			unknown protein		Lus10019575 [exp]	7.5	0.8487
AT5G49900			Beta-glucosidase, GBA2 type fa...		Lus10003517 [exp]	8.2	0.8957
AT1G48780			unknown protein		Lus10009633 [exp]	9.5	0.9187

Compare expression of checked genes

Lus10039078 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.