Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G51520 332 / 1e-113 diacylglycerol acyltransferase family (.1) AT3G26820 42 / 0.0004 Esterase/lipase/thioesterase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10039135 [exp] 477 / 6e-170 AT3G51520 421 / 2e-148 diacylglycerol acyltransferase family (.1) Lus10013796 [exp] 471 / 2e-167 AT3G51520 424 / 2e-149 diacylglycerol acyltransferase family (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.011G145900 [exp] 377 / 4e-131 AT3G51520 394 / 4e-138 diacylglycerol acyltransferase family (.1) Potri.013G033300 [exp] 43 / 0.0003 AT1G54570 850 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.005G046700 [exp] 43 / 0.0003 AT1G54570 868 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.001G324200 [exp] 42 / 0.0004 AT5G41120 734 / 0.0 Esterase/lipase/thioesterase family protein (.1) Potri.013G033600 [exp] 42 / 0.0008 AT1G54570 830 / 0.0 Esterase/lipase/thioesterase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0228 [flax] [poplar] Acyltransferase PF03982 [flax] [poplar] DAGAT Diacylglycerol acyltransferase
Representative CDS sequence Show only first row Show all	>Lus10039136 pacid=23150556 polypeptide=Lus10039136 locus=Lus10039136.g ID=Lus10039136.BGIv1.0 annot-version=v1.0 ATGGTTGAGAAAGCAGAGGAGGAGGGTGACCGGCGGCTTACCGGAACTCCTTTTTCTGCTGCTTATGGTACTACTAGATTGGAGGAGAATGTATATGGTG GTGGCAGTGGTGGCGGAGTAGCAACAATTTTGAGATCCAGTGATGTAATTCCCAGCAGCAAATTGAAGTCTCTAGTGTCAGTGGCGATATGGCTGGGGGC TATCTATTTCAACGTCGTCTTAGTTGTTGTATCCTTCATCTTCCTCCATTTCTCCAATTTCCTGATGCTGTTGGGGTTTCTTTTGGTGTTGATGTTCGTC CCCATCAACGATTCAAGCTACTTGGGTCGCCGATTCTGCAAGTACATTTGCAGGCACGCGTGTAGTTTCTTTCCGGTCACTCTTCACGTCGAGGATATCA ACGCCTTCTGTTCTGATCGTTCTTACGCAGTGTTCGGGTATGAGCCGCATTCAGTTCTTCCCATTGGCATCGTGACTCTGTCAGACCATGTGGGCTTTCT ACCTCTACCTAAAATTAAATTTCTTGCTAGCACAGCTGTGCTCCGGATCCCAATCCTGAGACATATATGGGCGTGGTGGGGTGTTGCCCCGATAACCAAG CACAATTTCAAGTCTCTCTTAGCAGCCGGTTGTAGCTGCATTCTTGTTCCTGGTGGCACCCAAGAAGGTTTCTACATGGAACATGGATCCGAGGTTGCTT TCCTGAATAAGCGAACAGGAGTCGTCCGGTTAGCCATGGAGATGGGTAGTCCCTTGGTTCCGGTTTTCTCCTTCGGTCAGTCAGATGTGTACAAGGGGTG GAAACCCGGAGGAAAGAGGTTCTTAACATTTTCCAGAACCATTGGGTTCGCCCCGGTTATCTTCTGGGGTCGACTCGGGTCTCCATTGCCATTCCAGCAG CCAATGTACGTTGTAGTCGGCCGACCCATCGAATTTCAGCAAAATGCTCATCCCGGCATGGAAGAGGTGGCTGAAGTTCATGGGAAGTTTGTTGCAGCGC TGAAAGAACTCTTTGATAGGCACAAATTTGTACGTGTTTCGTAA
AA sequence Show only first row Show all	>Lus10039136 pacid=23150556 polypeptide=Lus10039136 locus=Lus10039136.g ID=Lus10039136.BGIv1.0 annot-version=v1.0 MVEKAEEEGDRRLTGTPFSAAYGTTRLEENVYGGGSGGGVATILRSSDVIPSSKLKSLVSVAIWLGAIYFNVVLVVVSFIFLHFSNFLMLLGFLLVLMFV PINDSSYLGRRFCKYICRHACSFFPVTLHVEDINAFCSDRSYAVFGYEPHSVLPIGIVTLSDHVGFLPLPKIKFLASTAVLRIPILRHIWAWWGVAPITK HNFKSLLAAGCSCILVPGGTQEGFYMEHGSEVAFLNKRTGVVRLAMEMGSPLVPVFSFGQSDVYKGWKPGGKRFLTFSRTIGFAPVIFWGRLGSPLPFQQ PMYVVVGRPIEFQQNAHPGMEEVAEVHGKFVAALKELFDRHKFVRVS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G51520			diacylglycerol acyltransferase...		Lus10039136 [exp]	0	1
AT1G11340			S-locus lectin protein kinase ...		Lus10030765 [exp]	6.6	0.6994
AT1G24625	C2H2ZnF	ZFP7	zinc finger protein 7 (.1)		Lus10043380 [exp]	8.7	0.6724
AT3G10320			Glycosyltransferase family 61 ...		Lus10042043 [exp]	11.0	0.7050
AT4G18340			Glycosyl hydrolase superfamily...		Lus10031034 [exp]	14.3	0.6919
					Lus10004853 [exp]	15.7	0.6919
					Lus10027667 [exp]	16.9	0.6919
AT4G34540			NmrA-like negative transcripti...		Lus10012146 [exp]	18.1	0.6919
					Lus10000273 [exp]	19.2	0.6919
AT1G17930			Aminotransferase-like, plant m...		Lus10001981 [exp]	20.2	0.6919
					Lus10015682 [exp]	21.2	0.6919

Compare expression of checked genes

Lus10039136 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.