Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64260 197 / 1e-61 EXL2, MSJ1.10 EXORDIUM like 2 (.1) AT4G08950 191 / 6e-59 EXO EXORDIUM, Phosphate-responsive 1 family protein (.1) AT3G02970 189 / 4e-58 EXL6 EXORDIUM like 6 (.1) AT1G35140 185 / 1e-56 EXL1, EXL7, PHI-1 PHOSPHATE-INDUCED 1, EXORDIUM like 1, Phosphate-responsive 1 family protein (.1) AT5G09440 184 / 1e-56 EXL4 EXORDIUM like 4 (.1) AT5G51550 112 / 1e-28 EXL3 EXORDIUM like 3 (.1) AT2G17230 111 / 5e-28 EXL5 EXORDIUM like 5 (.1) AT2G35150 96 / 1e-22 EXL7, EXL1 EXORDIUM LIKE 7, EXORDIUM like 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013789 [exp] 536 / 0 AT5G64260 203 / 1e-63 EXORDIUM like 2 (.1) Lus10021370 [exp] 182 / 4e-55 AT4G08950 403 / 1e-141 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10017050 [exp] 177 / 3e-53 AT4G08950 404 / 2e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10010352 [exp] 174 / 2e-52 AT5G64260 378 / 2e-132 EXORDIUM like 2 (.1) Lus10036484 [exp] 152 / 3e-44 AT5G64260 301 / 2e-102 EXORDIUM like 2 (.1) Lus10031130 [exp] 104 / 2e-25 AT5G51550 526 / 0.0 EXORDIUM like 3 (.1) Lus10026548 [exp] 102 / 7e-25 AT2G17230 499 / 2e-178 EXORDIUM like 5 (.1) Lus10013834 [exp] 102 / 8e-25 AT2G17230 496 / 4e-177 EXORDIUM like 5 (.1) Lus10018314 [exp] 102 / 1e-24 AT2G35150 395 / 5e-138 EXORDIUM LIKE 7, EXORDIUM like 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.013G080100 [exp] 307 / 3e-104 AT3G02970 213 / 7e-67 EXORDIUM like 6 (.1) Potri.005G163700 [exp] 206 / 2e-64 AT4G08950 431 / 4e-153 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163000 [exp] 205 / 2e-64 AT5G64260 379 / 8e-133 EXORDIUM like 2 (.1) Potri.017G051700 [exp] 204 / 2e-64 AT5G64260 439 / 2e-156 EXORDIUM like 2 (.1) Potri.005G163600 [exp] 204 / 6e-64 AT4G08950 438 / 1e-155 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163500 [exp] 204 / 8e-64 AT4G08950 430 / 2e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163300 [exp] 201 / 1e-62 AT4G08950 436 / 8e-155 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.001G311700 [exp] 199 / 2e-62 AT5G64260 444 / 2e-158 EXORDIUM like 2 (.1) Potri.002G098800 [exp] 199 / 5e-62 AT4G08950 430 / 1e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.002G098600 [exp] 192 / 3e-59 AT4G08950 404 / 4e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04674 [flax] [poplar] Phi_1 Phosphate-induced protein 1 conserved region
Representative CDS sequence Show only first row Show all	>Lus10039143 pacid=23150614 polypeptide=Lus10039143 locus=Lus10039143.g ID=Lus10039143.BGIv1.0 annot-version=v1.0 ATGGCGCTTCAATCAGTTCTCTTCTTCTTCTTCTCATTCTCCCTCCTCTTATTCTTCTCCCCGCCATGCTCAGCCGGCGGCGGCGGCCATAAAAAAGAGC CCGCCCAGCTAACCTACCACGGAGGCCAGATCCTTACCGGGGAGCTTAAGCTCGCCCTCGTCTGGTACGGCCATTGTGGCCGCATCCAGAAGAACGCGAT TAGGGCGTTCGTGAAGTCGCTCAACTTCGAAGGGAAGAAGAAGGCGGCGCCGCGGGTGTCGGAGTGGTGGAAGAAGGTGGAATCGTACCAGACGGCGGTC AAGCTGCCGCATAAGCCGATCAAAGTGAGCGTGGTGAGGCAGGTCACCGACACGAGCTACTCCATCGGGAAAGTAGTCACCGTGGATTTCGTGAAGCCTC TCCTCCATAAGGCTAGCCAAGGAGACACCAGCATCTTGCCGGTGATTCTGACGGCGAGGGATGTCTCCGTTCAGGGACTCTGCACGGGGAAGTGCTCCAA ACACGGCGCCATTGAGAAGCAGCCGTATCTCATAGTGGGGAACCCGGAGACGGAGTGCCCTGAAGCATGCGCGTGGCCGTTCCGAGGACAGCCGGCCTTC GTCCCGCCGTCCGGCGACGTCGGAGCAGACGCCATGGTGATCGCCTTCGCTCAAGGATTGGCCGACACGGTCACCAACCCGATGGAGACCGGATTTTTCC AAGAAGTGCGGAGAAAGACATTGGAGGCGGCGTCGGTTTGCTCCGGGATATTCGGAAGCGGGGCGACGGCCGGAAGCAACCCAGGTAAGGTGCTCAAGGA TCCAAAGGGCGGGAGCAGCTTTAATTCGTACGGTTGCAGCAACAGTAAGCGGTTCTTGCTCCCTGCTCTCTGGGATCCTGCAACGAAATCTTGCTGGACC TTGATGTAA
AA sequence Show only first row Show all	>Lus10039143 pacid=23150614 polypeptide=Lus10039143 locus=Lus10039143.g ID=Lus10039143.BGIv1.0 annot-version=v1.0 MALQSVLFFFFSFSLLLFFSPPCSAGGGGHKKEPAQLTYHGGQILTGELKLALVWYGHCGRIQKNAIRAFVKSLNFEGKKKAAPRVSEWWKKVESYQTAV KLPHKPIKVSVVRQVTDTSYSIGKVVTVDFVKPLLHKASQGDTSILPVILTARDVSVQGLCTGKCSKHGAIEKQPYLIVGNPETECPEACAWPFRGQPAF VPPSGDVGADAMVIAFAQGLADTVTNPMETGFFQEVRRKTLEAASVCSGIFGSGATAGSNPGKVLKDPKGGSSFNSYGCSNSKRFLLPALWDPATKSCWT LM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G64260		EXL2, MSJ1.10	EXORDIUM like 2 (.1)		Lus10039143 [exp]	0	1
AT1G08315			ARM repeat superfamily protein...		Lus10024145 [exp]	7.7	0.7587
AT1G32340		NHL8	NDR1/HIN1-like 8 (.1)		Lus10004569 [exp]	14.5	0.7030
AT4G05020		NDB2	NAD(P)H dehydrogenase B2 (.1),...		Lus10020087 [exp]	27.6	0.7498
AT4G23630		RTNLB1, BTI1	Reticulan like protein B1, VIR...		Lus10014948 [exp]	28.3	0.7401
AT3G27010	TCP	ATTCP20, PCF1, ...	ARABIDOPSIS THALIANA TEOSINTE ...		Lus10032022 [exp]	31.7	0.7474
AT5G04460			RING/U-box superfamily protein...		Lus10017455 [exp]	33.7	0.7345
AT5G56660		ILL2	IAA-leucine resistant (ILR)-li...		Lus10029200 [exp]	41.6	0.6382
AT1G03400			2-oxoglutarate (2OG) and Fe(II...		Lus10007818 [exp]	42.7	0.7157
AT4G05200		CRK25	cysteine-rich RLK (RECEPTOR-li...		Lus10018377 [exp]	50.1	0.7180
AT4G29850			Eukaryotic protein of unknown ...		Lus10019737 [exp]	51.6	0.7307

Compare expression of checked genes

Lus10039143 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.