Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 164 / 7e-51 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 125 / 2e-35 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 107 / 2e-28 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 82 / 7e-19 ATDR4 drought-repressed 4 (.1) AT1G72290 45 / 8e-06 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013770 [exp] 375 / 7e-134 AT1G17860 166 / 6e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007889 [exp] 358 / 3e-127 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007890 [exp] 355 / 6e-126 AT1G17860 166 / 7e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007892 [exp] 353 / 8e-125 AT1G17860 163 / 1e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10007902 [exp] 352 / 2e-124 AT1G17860 162 / 3e-50 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030354 [exp] 350 / 9e-124 AT1G17860 160 / 1e-49 Kunitz family trypsin and protease inhibitor protein (.1) Lus10030355 [exp] 267 / 8e-91 AT1G17860 149 / 5e-45 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039210 [exp] 250 / 2e-84 AT1G17860 179 / 4e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10042301 [exp] 249 / 6e-84 AT1G17860 182 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 216 / 3e-71 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 215 / 7e-71 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 210 / 5e-69 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 192 / 6e-62 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 185 / 7e-59 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 181 / 2e-57 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 152 / 3e-46 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.001G309900 [exp] 90 / 4e-22 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 88 / 2e-21 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.007G111800 [exp] 81 / 1e-18 AT1G73260 79 / 3e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10039163 pacid=23150482 polypeptide=Lus10039163 locus=Lus10039163.g ID=Lus10039163.BGIv1.0 annot-version=v1.0 ATGAAGTCAGCAGCAGCAGCAAATGGGATGCTACTCATCGTCGTCCTAATCGCCATCGGTGCTCTCTCCACCGCGTCAGCGGCCAGATCGCTGGCCGAAA CACTAGCCACGTCATCGCTAACGCCACTCCCCGTCCTGGATGTGGACGGGAAAGTGGTCCGGTCAGGGACCACTTACTACATCCTTCCTGCAACTAGCGG GGAAGGCGGTGGTGTGGCCATGGCTAGTAAGACCAACGACCCGGAGAGCTGCCCGTTGACCGTGGTCCAGGACGGCGACGAGCTCTCCCAGGGCTTGCCT CTCACTTTCGGCCCGGTCAACACCAAGGTGGGCTACACTGTTCGCACGTTCACCGACCTCAACGTCAAGTTCTCTGCTGATACGGCCTGCGATGAGGGGA CGGTGTGGAAGGTGGATGATTATGACGATGATGTGGAGCAGTGGTTTGTGGGAACCGGTGGGGTTGAAGGGAATCCCGGTCCGAGGACTGTGAAGAACTG GTTCAAGATTTGGAAGTATGGCTCGAACTATAAGTTTTCGTACTGCCCTGCGGTTTGCAAGTCGTGCAAGGTTGATTGCAAGGATGTCGGGATTTATGTG GATGAGAATGGTGGGAGAAGGTTGGCTTTGGTTGACAAGGAAGGGGATCCTTTTGTGGTCAAGTTTGTGAAGGCAGCTTGA
AA sequence Show only first row Show all	>Lus10039163 pacid=23150482 polypeptide=Lus10039163 locus=Lus10039163.g ID=Lus10039163.BGIv1.0 annot-version=v1.0 MKSAAAANGMLLIVVLIAIGALSTASAARSLAETLATSSLTPLPVLDVDGKVVRSGTTYYILPATSGEGGGVAMASKTNDPESCPLTVVQDGDELSQGLP LTFGPVNTKVGYTVRTFTDLNVKFSADTACDEGTVWKVDDYDDDVEQWFVGTGGVEGNPGPRTVKNWFKIWKYGSNYKFSYCPAVCKSCKVDCKDVGIYV DENGGRRLALVDKEGDPFVVKFVKAA

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10039163 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10026357 [exp]	1.4	0.9958
AT5G09360		LAC14	laccase 14 (.1)		Lus10006157 [exp]	2.4	0.9910
AT1G21326			VQ motif-containing protein (....		Lus10012286 [exp]	2.4	0.9917
AT1G17860			Kunitz family trypsin and prot...		Lus10042301 [exp]	2.6	0.9896
AT4G17030		ATHEXPBETA3.1, ...	expansin-like B1 (.1)		Lus10030931 [exp]	3.0	0.9915
					Lus10043316 [exp]	5.3	0.9913
AT1G06620			2-oxoglutarate (2OG) and Fe(II...		Lus10001103 [exp]	6.7	0.9846
AT1G79460		ATKS1, ATKS, GA...	GA REQUIRING 2, ARABIDOPSIS TH...		Lus10024120 [exp]	7.1	0.9912
AT1G06135			unknown protein		Lus10000703 [exp]	7.3	0.9877
AT4G02780		ATCPS1, ABC33, ...	GA REQUIRING 1, CPP synthase, ...		Lus10042593 [exp]	8.9	0.9843

Compare expression of checked genes

Lus10039163 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.