Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G17860 171 / 6e-54 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73260 119 / 3e-33 ATKTI1 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) AT1G73325 107 / 1e-28 Kunitz family trypsin and protease inhibitor protein (.1) AT1G73330 93 / 3e-23 ATDR4 drought-repressed 4 (.1) AT1G72290 50 / 2e-07 Kunitz family trypsin and protease inhibitor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013730 [exp] 357 / 5e-127 AT1G17860 175 / 2e-55 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039209 [exp] 354 / 5e-126 AT1G17860 179 / 6e-57 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013731 [exp] 357 / 2e-125 AT1G17860 172 / 5e-53 Kunitz family trypsin and protease inhibitor protein (.1) Lus10022302 [exp] 335 / 3e-116 AT1G17860 176 / 4e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10026357 [exp] 327 / 5e-115 AT1G17860 181 / 6e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10042301 [exp] 323 / 2e-113 AT1G17860 182 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Lus10039208 [exp] 313 / 1e-109 AT1G17860 172 / 2e-54 Kunitz family trypsin and protease inhibitor protein (.1) Lus10013732 [exp] 311 / 1e-108 AT1G17860 166 / 4e-52 Kunitz family trypsin and protease inhibitor protein (.1) Lus10011090 [exp] 305 / 2e-106 AT1G17860 161 / 4e-50 Kunitz family trypsin and protease inhibitor protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G153400 [exp] 201 / 1e-65 AT1G17860 223 / 1e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153466 [exp] 200 / 4e-65 AT1G17860 222 / 4e-74 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153600 [exp] 195 / 3e-63 AT1G17860 217 / 3e-72 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067600 [exp] 184 / 9e-59 AT1G17860 196 / 9e-64 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067900 [exp] 182 / 5e-58 AT1G17860 183 / 2e-58 Kunitz family trypsin and protease inhibitor protein (.1) Potri.017G153200 [exp] 171 / 2e-53 AT1G17860 191 / 5e-62 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G067800 [exp] 134 / 4e-39 AT1G17860 137 / 8e-41 Kunitz family trypsin and protease inhibitor protein (.1) Potri.019G006900 [exp] 89 / 5e-22 AT1G73260 79 / 6e-18 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1) Potri.001G309900 [exp] 86 / 1e-20 AT1G17860 90 / 2e-22 Kunitz family trypsin and protease inhibitor protein (.1) Potri.004G000400 [exp] 85 / 2e-20 AT1G73260 91 / 9e-23 ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1, kunitz trypsin inhibitor 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0066 [flax] [poplar] Trefoil PF00197 [flax] [poplar] Kunitz_legume Trypsin and protease inhibitor
Representative CDS sequence Show only first row Show all	>Lus10039210 pacid=23150454 polypeptide=Lus10039210 locus=Lus10039210.g ID=Lus10039210.BGIv1.0 annot-version=v1.0 ATGAAGACAACATCAATGCTCCTTACAATCTCTTCATTCACCATACTCCTAATCTCCTTCACCACACTCTCATCCGCAGCATCATCCCCAACTCCGGTCA CCGATGTCGATGGCACACCCCTCCGATCAGGCCTCAAGTACTTCATCCTCCCATCCGTCTCCGGAAACGGCGGGGGCATCTTCCTAGACACAACCAAAAC CCAAAAATGCCCTCTTTCCGTCTTCCAAGACGACTACGAGCTCTCCAAGGGTCTCCCCGTAGTTTTCCTGCCCGTCAACGCCAAGCAAGGGTACACCGTC CAGACGAACACCGATCTCAACATCGAGTTCACTGCAGAGACTGCGTGCGATGAAGCCACTGTATGGAAGGTGGAGAGTTACGACCATGATGTCAAGCAGT GGTTCATTGGGACCGGTGGGATCGAAGGGAAGCCTGGTCCGAGGACTGTGGACAGCTGGTTTAAGATTGCGAAATTCGGAGGGAACTACAAGCTCGTGTA TTGCCCTTCTGTGTGCAAGTCGTGTAAAGTTCAGTGTAAGGATGTCGGGGTTTATGTGGATGAAGATGGTAAGAAGAGGCTTGCTCTTACTGATGATGAG CCTTCCATTGTTAAGTTTATGAAAGCTTCTAACAAGTACTGA
AA sequence Show only first row Show all	>Lus10039210 pacid=23150454 polypeptide=Lus10039210 locus=Lus10039210.g ID=Lus10039210.BGIv1.0 annot-version=v1.0 MKTTSMLLTISSFTILLISFTTLSSAASSPTPVTDVDGTPLRSGLKYFILPSVSGNGGGIFLDTTKTQKCPLSVFQDDYELSKGLPVVFLPVNAKQGYTV QTNTDLNIEFTAETACDEATVWKVESYDHDVKQWFIGTGGIEGKPGPRTVDSWFKIAKFGGNYKLVYCPSVCKSCKVQCKDVGVYVDEDGKKRLALTDDE PSIVKFMKASNKY

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G17860			Kunitz family trypsin and prot...		Lus10039210 [exp]	0	1
AT1G17860			Kunitz family trypsin and prot...		Lus10022302 [exp]	1.0	0.9938
AT1G17860			Kunitz family trypsin and prot...		Lus10013730 [exp]	2.0	0.9902
AT1G17860			Kunitz family trypsin and prot...		Lus10007892 [exp]	2.0	0.9936
AT1G17860			Kunitz family trypsin and prot...		Lus10013731 [exp]	2.4	0.9910
AT1G17860			Kunitz family trypsin and prot...		Lus10030355 [exp]	4.0	0.9728
AT1G17860			Kunitz family trypsin and prot...		Lus10007902 [exp]	4.5	0.9873
AT1G17860			Kunitz family trypsin and prot...		Lus10039209 [exp]	4.9	0.9750
AT5G09360		LAC14	laccase 14 (.1)		Lus10006157 [exp]	6.0	0.9869
AT1G17860			Kunitz family trypsin and prot...		Lus10007890 [exp]	6.3	0.9783
AT1G17860			Kunitz family trypsin and prot...		Lus10042301 [exp]	7.0	0.9844

Compare expression of checked genes

Lus10039210 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.