Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G25570 249 / 1e-83 ACYB-2 Cytochrome b561/ferric reductase transmembrane protein family (.1) AT5G38630 168 / 4e-52 ACYB-1 cytochrome B561-1 (.1) AT1G14730 114 / 5e-31 Cytochrome b561/ferric reductase transmembrane protein family (.1) AT1G26100 112 / 4e-30 Cytochrome b561/ferric reductase transmembrane protein family (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027461 [exp] 351 / 1e-123 AT4G25570 287 / 3e-98 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10038866 [exp] 285 / 6e-98 AT4G25570 326 / 3e-114 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10014986 [exp] 283 / 4e-96 AT4G25570 331 / 8e-115 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10003076 [exp] 140 / 8e-42 AT5G38630 281 / 2e-97 cytochrome B561-1 (.1) Lus10034074 [exp] 139 / 1e-39 AT5G38630 287 / 7e-98 cytochrome B561-1 (.1) Lus10034427 [exp] 130 / 2e-37 AT1G14730 280 / 4e-96 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10031935 [exp] 130 / 3e-37 AT1G14730 284 / 8e-98 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10028996 [exp] 112 / 4e-30 AT4G25570 145 / 4e-43 Cytochrome b561/ferric reductase transmembrane protein family (.1) Lus10003682 [exp] 100 / 1e-25 AT4G25570 131 / 1e-37 Cytochrome b561/ferric reductase transmembrane protein family (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G143700 [exp] 278 / 2e-95 AT4G25570 297 / 8e-103 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.012G141000 [exp] 268 / 3e-91 AT4G25570 254 / 5e-86 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.017G111700 [exp] 173 / 6e-54 AT5G38630 321 / 2e-112 cytochrome B561-1 (.1) Potri.004G103800 [exp] 171 / 2e-53 AT5G38630 301 / 2e-104 cytochrome B561-1 (.1) Potri.008G115300 [exp] 158 / 4e-48 AT5G38630 272 / 7e-93 cytochrome B561-1 (.1) Potri.010G102400 [exp] 129 / 5e-37 AT1G14730 271 / 7e-93 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.008G138300 [exp] 129 / 9e-37 AT1G14730 252 / 2e-85 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.010G131100 [exp] 115 / 2e-31 AT1G26100 270 / 6e-92 Cytochrome b561/ferric reductase transmembrane protein family (.1) Potri.008G115200 [exp] 110 / 1e-29 AT1G26100 270 / 6e-92 Cytochrome b561/ferric reductase transmembrane protein family (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0328 [flax] [poplar] 2heme_cytochrom PF03188 [flax] [poplar] Cytochrom_B561 Eukaryotic cytochrome b561
Representative CDS sequence Show only first row Show all	>Lus10039216 pacid=23175482 polypeptide=Lus10039216 locus=Lus10039216.g ID=Lus10039216.BGIv1.0 annot-version=v1.0 ATGGCTTTAACAGTGAACGCATTACCTTTCACGTTCGTCGCGCACTTGATCGGCATAGCCGCTGCGGTCATGGTTTTGGTCTGGTGCATATATTTCAGAG GCGGCCTAGCTTGGGAGGATACCAACAAAAACCTTATCTTCAATATTCATCCTGTGCTGATGTTAATCGGCCTTATAATCATAGGAGGCGAAGCAATCAT AAGCTACAAGTCTCTTCCCCTGAAGAAAGAAGCGAAGAAACTGACCCACCTGATTCTCCACGGCGTTGCACTCATTCTTGGGATCATCGGCATCTACGCA GCGTTCAAATTCCACAACGAAAGTGGCATCGACAACCTCTACAGCTTACACTCCTGGCTTGGAATTCTCGTCATTTCCCTCTATGGCATCCAGTGGATAT ATGGGTTGATCATCTTCTTCTACCCAGGAGGATCAAGTACCCTGAGGAAAACATCCATCCCATGGCACGTGTTGCTTGGGCTGTTTATATTTGTGTTAGC AATAGGCACTGCAGCTATAGGGCTCCTGGAGAAGCTCACATTCCTTGAGAACGGCATCAAACTCCCCAAGTACGGTTCAGAGGCCCTGCTTGTCAACTTC ACTGCTGTCGTCACAATTCTGTATGGCGCCTTTGTGATACTGTCGGTCCTTGGGCGGAGCCAGGGTAAAGATAGCGGAACCTATTCTGCTATATAA
AA sequence Show only first row Show all	>Lus10039216 pacid=23175482 polypeptide=Lus10039216 locus=Lus10039216.g ID=Lus10039216.BGIv1.0 annot-version=v1.0 MALTVNALPFTFVAHLIGIAAAVMVLVWCIYFRGGLAWEDTNKNLIFNIHPVLMLIGLIIIGGEAIISYKSLPLKKEAKKLTHLILHGVALILGIIGIYA AFKFHNESGIDNLYSLHSWLGILVISLYGIQWIYGLIIFFYPGGSSTLRKTSIPWHVLLGLFIFVLAIGTAAIGLLEKLTFLENGIKLPKYGSEALLVNF TAVVTILYGAFVILSVLGRSQGKDSGTYSAI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10039216 [exp]	0	1
AT4G23430		AtTic32-IVa	translocon at the inner envelo...		Lus10014975 [exp]	1.4	0.9658
AT4G23430		AtTic32-IVa	translocon at the inner envelo...		Lus10038857 [exp]	2.0	0.9423
					Lus10026628 [exp]	2.8	0.9327
AT1G75900		EXL3	GDSL-like Lipase/Acylhydrolase...		Lus10028425 [exp]	4.5	0.9230
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10027461 [exp]	6.0	0.9238
AT1G06690			NAD(P)-linked oxidoreductase s...		Lus10016327 [exp]	6.9	0.9374
AT4G39970			Haloacid dehalogenase-like hyd...		Lus10023149 [exp]	7.1	0.9290
AT1G42550		PMI1	plastid movement impaired1 (.1...		Lus10002170 [exp]	7.7	0.9120
AT3G14770		SWEET2, AtSWEET...	Nodulin MtN3 family protein (....		Lus10005411 [exp]	8.8	0.9125
AT4G01935			unknown protein		Lus10010062 [exp]	9.9	0.9186

Compare expression of checked genes

Lus10039216 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.