Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G23910 324 / 1e-99 ATP binding microtubule motor family protein (.1) AT5G02370 242 / 6e-70 ATP binding microtubule motor family protein (.1) AT1G18410 112 / 5e-25 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27950 108 / 3e-24 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G65930 108 / 9e-24 PKCBP, ZWI POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) AT2G28620 107 / 1e-23 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT2G22610 104 / 9e-23 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G73860 103 / 2e-22 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT3G49650 103 / 2e-22 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G60930 103 / 3e-22 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027488 [exp] 1391 / 0 AT5G23910 327 / 9e-101 ATP binding microtubule motor family protein (.1) Lus10024395 [exp] 224 / 1e-63 AT5G02370 593 / 0.0 ATP binding microtubule motor family protein (.1) Lus10025349 [exp] 170 / 1e-43 AT5G02370 536 / 0.0 ATP binding microtubule motor family protein (.1) Lus10019245 [exp] 119 / 2e-27 AT3G49650 816 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10011579 [exp] 118 / 5e-27 AT3G49650 950 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10009073 [exp] 112 / 6e-25 AT3G45850 1019 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2) Lus10006064 [exp] 110 / 3e-24 AT5G65930 1877 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Lus10009426 [exp] 108 / 9e-24 AT5G65930 1796 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Lus10025275 [exp] 106 / 3e-23 AT3G45850 981 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G146000 [exp] 473 / 2e-156 AT5G23910 439 / 2e-144 ATP binding microtubule motor family protein (.1) Potri.006G085300 [exp] 233 / 2e-66 AT5G02370 660 / 0.0 ATP binding microtubule motor family protein (.1) Potri.013G033900 [exp] 105 / 3e-23 AT5G27950 676 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.005G150800 [exp] 105 / 4e-23 AT5G60930 1386 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.011G146700 [exp] 104 / 1e-22 AT5G65930 1864 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Potri.013G020700 [exp] 103 / 2e-22 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.001G455300 [exp] 103 / 2e-22 AT5G65930 1881 / 0.0 POTATO KINESIN-LIKE CALMODULIN-BINDING PROTEIN, kinesin-like calmodulin-binding protein (ZWICHEL) (.1), kinesin-like calmodulin-binding protein (ZWICHEL) (.2), kinesin-like calmodulin-binding protein (ZWICHEL) (.3) Potri.002G106000 [exp] 103 / 2e-22 AT5G60930 1524 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.001G467600 [exp] 101 / 8e-22 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.008G221400 [exp] 100 / 1e-21 AT3G16630 1167 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Lus10039243 pacid=23175606 polypeptide=Lus10039243 locus=Lus10039243.g ID=Lus10039243.BGIv1.0 annot-version=v1.0 ATGGCAACATCAACTCCGAACCATGCCAATCAGTCCACTGTGCCACTCAGTCGAAAGGTTAGAGTGGTGGCGAAGATCCGGAGTTTGACCAATTCAGAAG TCTTTCCGGGAAAGCCGGCCCCTGCGGCATCGTGGATTTCCGTGAGCAAGCCTAACGGAGACGATTCTAACAGGGTGACAGTTACCTTGGGCGAGCAATC AGGAAGTTCGAAGGAGTGTTTTGAGATTGGTTACTGTTATGAAGAGGCGGAAGGCAATGAAGTGATTTTCAAGAGAGATGTGAAGACTTTGCTGCCCGGA CTGTTCAATGGTCATAATGCAACTATTGTTGCTTGTGGAGCTAGAGATTCCGGGAAAACCCACTTTGTGCAAGGTATTGATGAGGAACCAGGATTGACAA CTCTATGCATGAACGAAATTCTTCGGATGGCGGAGGAGAATAAAAAGTCCGTCATGATTTCATATTTTGAGATTTTGCAAGAACGTGCTCACGATTTGTT GGAACCGAAGACGGAGGAAGTATTGGTTTTGAAAGATGGCCAAGGGCGAGTGCAACTTAAAGGACTTTCTTGTGTCCCAGTGAAATCTATGATGGAGTTT CACAAACTGTATTCTGGACGGAATCGGACAGTACGTAGGCTGAATCAGAAGAACACAACTCCACTCCCTTCAAGAAGCACGAAAGGGTTGATTGTGTATA TATTATCACATGGTGAAAAGTTGGTCAGAGGTTCTGTGGGAAAGATAAACTTTGTCGAGTTAGCAGGTTATGAGGATGCAAGAAGAACAAGCAATGCCGG CAACTTCAGCGAGAATGCACAAATCAACAAGTCTATAAATGCACTATTCAAGGTTTTCTATTCTTTGCATGCCAATGAAACGCATGTAGCATATCGAGAG AGTAAGCTCAGCCGTATGCTAGAAGATTCACTTGGAGGGAAAAGTAGAATATTGGTTGTTACATGTTTGAACCCATTTTCCTGCCAAGACTCCATAAACA TGTTGAATCTGGCTTCTCGTTGCTGCCAAAGCACTGACCGGGTTGGGTTGGATCCTGCTAGAAAAACAAACAGCACGACAAGATCAAAGGTTTTTGCTTC ACATAAGAGCCGGCTACCTGGGACCGGTAGTGTTTCCTCTATGAGGAAGCAACAAACTCCCTCCAATTTGCCTGTTCCTGGTAGGAAAGCCGGTGGAAAC GCTTCTGCTTTGAAAGCAAGGAAGTTATTTGATGAAAAATATCATGAGAAATCTGAGAAGAAGGTACTTGCTTTTCCTTACACTGAAAACTTAACTTCGA AAACCAGAAGAAGAAATCATCCTGTTATTGCTTCGGTAACAGAACTTTGTTCTCAGGAAGAGGTCTGTTCTTCTTCCATTAGCTTGACTACAGCTGCTAG TTCTGTACAAGAAGCGAGACTTTCATATGGTACGCAAGAAGTTTCTTCGACGAATTTCGAGGACATCCCTTCAGTTTCTTTCGACGTGCAGGAATCTCTG TCGATAGAAGTTTCTGGTCCATGTACAAGTACCACTTCAATTGACACGGTTTCTGTGGAGCAAAGTGTAGATAACCCTGTGGACATAACACCAGCCACCA AAACATTATCGGTGGTTGAAGAAGGTCGAAGTTTAGATGAGAAGGAGAATGATAAGTCATTGGTGAATGAAGGCGAATCTCCACCAATTAGCGCTCGGTT GCAGGAGATCTCAAACACTTTGAAGCAGCTCTTTAAGTCAACCCCATCGTATGAAGCTATACCTTTTAGCAACGACCCTTCACTCCTCCAATATCAAACT TCAACTCCTTCCAAAGGGCCATTGACTCCAGAGCTTGATAGGACAGCCAATGACATCATGGACTTCGAAACGGAGATCCCTTCTAGCGACGACCCTTCAG TCCTCCAGGATCAAACTTCTACTCCTTCCATAGGGCCACTGACACCAAAGCTCAATACAACAGCCAATGACACCTTGGACTTCGTAAAGACAATCGCTCA CACCACCAACGATCCTTCGCCTCCCATTTCGACCATTTCCATTGAACCAAGAACGCCCGAATGCAACATAAGACGAGCCAATAACAACACCTTGGACATT GCGAGCTTCTGCAGCCCCTGGGAGAAGCTGAACAGAAGCAACTGTGGAGTGAAGAACTCACTGGTTCAAGAGTATCTCAGCTTTATAAACACAGCTAACA AGGAAGATTTGAAGAAACTGAAGGGGATCGGAGAAAAGCGTGCTGCCTATATTATGGAACTGCGTGAAGATTCGCCATTTAAAGACCTTGACGAGTTGAA AGATGTTGGGATGTCAGCTAAGCAGATCAAAGACATGATGGGGAAGAATGTAGCTGCAGGGCTTTTCAGCTAG
AA sequence Show only first row Show all	>Lus10039243 pacid=23175606 polypeptide=Lus10039243 locus=Lus10039243.g ID=Lus10039243.BGIv1.0 annot-version=v1.0 MATSTPNHANQSTVPLSRKVRVVAKIRSLTNSEVFPGKPAPAASWISVSKPNGDDSNRVTVTLGEQSGSSKECFEIGYCYEEAEGNEVIFKRDVKTLLPG LFNGHNATIVACGARDSGKTHFVQGIDEEPGLTTLCMNEILRMAEENKKSVMISYFEILQERAHDLLEPKTEEVLVLKDGQGRVQLKGLSCVPVKSMMEF HKLYSGRNRTVRRLNQKNTTPLPSRSTKGLIVYILSHGEKLVRGSVGKINFVELAGYEDARRTSNAGNFSENAQINKSINALFKVFYSLHANETHVAYRE SKLSRMLEDSLGGKSRILVVTCLNPFSCQDSINMLNLASRCCQSTDRVGLDPARKTNSTTRSKVFASHKSRLPGTGSVSSMRKQQTPSNLPVPGRKAGGN ASALKARKLFDEKYHEKSEKKVLAFPYTENLTSKTRRRNHPVIASVTELCSQEEVCSSSISLTTAASSVQEARLSYGTQEVSSTNFEDIPSVSFDVQESL SIEVSGPCTSTTSIDTVSVEQSVDNPVDITPATKTLSVVEEGRSLDEKENDKSLVNEGESPPISARLQEISNTLKQLFKSTPSYEAIPFSNDPSLLQYQT STPSKGPLTPELDRTANDIMDFETEIPSSDDPSVLQDQTSTPSIGPLTPKLNTTANDTLDFVKTIAHTTNDPSPPISTISIEPRTPECNIRRANNNTLDI ASFCSPWEKLNRSNCGVKNSLVQEYLSFINTANKEDLKKLKGIGEKRAAYIMELREDSPFKDLDELKDVGMSAKQIKDMMGKNVAAGLFS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G23910			ATP binding microtubule motor ...		Lus10039243 [exp]	0	1
AT5G60930			P-loop containing nucleoside t...		Lus10000762 [exp]	2.0	0.9780
AT1G02730		SOS6, ATCSLD5	SALT OVERLY SENSITIVE 6, CELLU...		Lus10010024 [exp]	3.0	0.9737
AT5G23910			ATP binding microtubule motor ...		Lus10027488 [exp]	3.7	0.9741
AT1G50240		FU	FUSED, Protein kinase family p...		Lus10039167 [exp]	3.9	0.9698
AT3G51740		IMK2	inflorescence meristem recepto...		Lus10022679 [exp]	5.5	0.9696
AT5G27550			P-loop containing nucleoside t...		Lus10004487 [exp]	6.3	0.9718
AT5G18700		RUK, EMB3013	RUNKEL, EMBRYO DEFECTIVE 3013,...		Lus10012799 [exp]	7.9	0.9683
AT1G50240		FU	FUSED, Protein kinase family p...		Lus10013766 [exp]	8.0	0.9670
AT3G51950	C3HZnF		Zinc finger (CCCH-type) family...		Lus10009964 [exp]	9.1	0.9208
AT1G02730		SOS6, ATCSLD5	SALT OVERLY SENSITIVE 6, CELLU...		Lus10025046 [exp]	11.0	0.9590

Compare expression of checked genes

Lus10039243 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.