Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G59140 1928 / 0 ATMRP14, ABCC10 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) AT3G21250 1147 / 0 ATMRP6, ABCC8 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) AT1G04120 1106 / 0 ATABCC5, ABCC5, ATMRP5 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) AT3G13080 1080 / 0 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G13090 1050 / 0 ATMRP8, ATABCC6 ATP-binding cassette C6, multidrug resistance-associated protein 8 (.1) AT3G13100 1035 / 0 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1) AT3G60160 1032 / 0 ATMRP9, ABCC9 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) AT3G62700 986 / 0 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT2G47800 959 / 0 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) AT3G60970 922 / 0 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10027567 [exp] 2772 / 0 AT3G59140 2001 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10017548 [exp] 1554 / 0 AT3G59140 1544 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Lus10004896 [exp] 1199 / 0 AT3G21250 1727 / 0.0 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) Lus10022858 [exp] 1130 / 0 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10018027 [exp] 1014 / 0 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10024965 [exp] 1009 / 0 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10042023 [exp] 1002 / 0 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10011498 [exp] 972 / 0 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) Lus10023139 [exp] 908 / 0 AT3G62700 1659 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G023800 [exp] 2217 / 0 AT3G59140 1894 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.012G033500 [exp] 2192 / 0 AT3G59140 1948 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.012G033600 [exp] 2147 / 0 AT3G59140 1948 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.001G095600 [exp] 1776 / 0 AT3G59140 1639 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.003G135800 [exp] 1661 / 0 AT3G59140 1580 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.016G122901 [exp] 1291 / 0 AT3G59140 1144 / 0.0 ATP-binding cassette C10, multidrug resistance-associated protein 14 (.1) Potri.003G034700 [exp] 1204 / 0 AT3G21250 1773 / 0.0 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATP-binding cassette C8, multidrug resistance-associated protein 6 (.1.2) Potri.014G193400 [exp] 1120 / 0 AT1G04120 2323 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.002G255800 [exp] 1118 / 0 AT1G04120 2361 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Potri.001G362300 [exp] 1107 / 0 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0241 [flax] [poplar] ABC_membrane PF00664 [flax] [poplar] ABC_membrane ABC transporter transmembrane region CL0023 [flax] [poplar] P-loop_NTPase PF00005 [flax] [poplar] ABC_tran ABC transporter
Representative CDS sequence Show only first row Show all	>Lus10039320 pacid=23175707 polypeptide=Lus10039320 locus=Lus10039320.g ID=Lus10039320.BGIv1.0 annot-version=v1.0 ATGGAGGGCTTCTGGGAGATGTTCTGTGGGAAATCTGGAACTTCTCCTCAAGAAGACAATGGTGGAAGAAGACAGCTACTACTGTATTCCAAGTCTTTCT TCTTCTTGAATCATCATGAGTACTCAACAGCTTCTTCTTGTACCAGTCAAGCACTGCTCATTTGCTTTGATGTTCTACTGCTTGTCCTCCTCTTGTTCAA CTTCATACCATCATCATCATCGTCCAAAATGCAGCGAGTTGGATTTCGCGGCATTCCAAAGCTGGGAATTGTATCTGCACTCTTCAATGGATGTCTTGGC CTTGTCTACTTGTGTTTAGGAGTATGGGATCTTGAAGAGAAGTTGCCAATGAAGTTGTGGCTGCCATTGTTCTTCCAAGCCTTAACATGGAGTTTGATCG GCTTACTCATAAGCCTTTTCGGAACATCTCTTCCTAGATTCCGGATCAGATTCCTCTCCATTTCCACATTGCTGTTTTCGGGAATCGTTGGTGGGATGTC TGTGTTCACAGCAATCCTGAACAAGAGAATTGATGTCAAGATAACTGCAGATGTTCTAACATTTCCAGGAGCTTTACTGTTGACACTATGCGCTTACAAG GTGCATAGTAGTAACGATGAAGAGATCGAGTCCGAAAATGGCGGCCTATATGCTCCTTTGAATGGTGATTCCAACGGCATTAACGACGAGAAACATGAGA AAGCAATTCCATTTTCAAAAGTAGGGGTCTTGGGAACTCTGTCATTTTGGTGGCTGAATCCTCTGATGAAATTAGGCAGGGAAAAGACTCTTGAAGAAGA GGATATTCCGAACCTACGCCAGGCGGATCGAGCCGAAACTTGCTACACGGTTTTCCAGGAGCAGTTAAGCAAGGAAGAGAAACAATCTCAGCCTTCGCTT TTGTGGACGATTGCGAGGTGCCATTCCAGAGACATTTTCGTCTCCGGGTTCTTTGCTTTCTTGAAGATAGTTACAGCATCAGCAGGTCCACTGCTTCTCA ACGCCTTTATACTGGTAGCTGAAGGAAACGCTAGTTTCCAATATGAAGGATATCTACTAGCGTTGACCCTTTTCTTCAGCAAGTCTTTGGAGTCCTTATC TCAAAGGCAATGGTACTTCAGGTCTAGACTCATTGGTTTAAAGATAAGGTCTTTACTCACAGCTGCAATCTACAAGAAGCAACTGAAGCTGTCGAATGCC AGTAGATTAACGCACTCGGGAGGCGAGATAATGAACTATGTCACAGTAGATGCTTACAGAATTGGCGAATTCCCCTTTTGGTTTCACCAGACATGGACGA CAAGCTTGCAGCTTTGCCTTTCGCTGATCATTCTCTTCCGAGCTGTTGGGTTGGCAACTTTTGCAGCCTTGGCGATCATAGTGCTGACCGTTTTGTGCAA TGCTCCATTGGCTAAGCTGCAGCATAGGTTCCAAACCAGGCTCATGACGGCTCAGGACGAAAGGCTCAAGGCCTGTGGGGAGTCTCTGGTGAACATGAAG GTTCTGAAGCTGTATGCTTGGGAAACACACTTCAAAACTGTTATAGAGAAGTTAAGGGAAGTCGAATATACATGGCTAAGAGCTGTGCAGTTGAGGAAGT CTTACAACAGTGTTCTGTTCTGGTCTTCTCCTGTTTTGGTCTCCACTGCAACTTTTGGTGCCTGTTACTTTCTCAAAGTTCCGCTCCATGCGAACAATGT CTTCACTTTCGTGGCGACGTTGAGGCTTGTTCAGGAACCTGTTAGGTCCATCCCTGACGTTATCGGCGTGGTGATCCAAGCGAAGGTGGCGTTCGCTCGG ATTGTGAGGTTCCTCGAGGCTCCGGAGTTGGAGAATGGGAATGTTAGGCAAAGGAGCAATCTGGGTGGAGGAGTTGACAGCAGCAGCCATGCCATTTCAA TCAAGTCTGCAGATTTTTCATGGGAAGAGAACTCTTCAAAGCCTACACTCAAGAATGTGGATTTGGAAATCAGACCTGGGGAAAAGGTCGCTGTTTGTGG TGAAGTCGGCTCTGGGAAATCAACCCTTTTGGCAGCGATTCTCGGAGAGGTTCCAAACACTCGGGGAAATGGGTTTTACCTTGATGAACTACAGGTTCAG GTTCATGGCAGCATTGCCTATGTTTCCCAAACAGCTTGGATCCAGACAGGAAGTATACAAGATAACATCTTATTCGGGTCTGCAATGGATAAACAGAGAT ATGAAGACACTCTTGAAAGATGTTCATTGGTGAAGGATCTCGAGCTGCTGCCGTACGGAGATCTGACGGAGATCGGTGAGAGAGGGGTCAATCTGAGTGG TGGCCAAAAACAGCGTATTCAACTGGCTCGTGCACTGTACCAGGATGCTGACATTTACCTTCTGGATGATCCATTCAGTGCTGTGGATGCCCACACTGCT ACAAGCCTGTTCAATGAATATGTTATGGAGGCACTCTCGATGAAGACAGTGTTTCTAGTGACCCATCAAGTAGACTTCTTGCCAACATTTGATGCTGTCC TGTTGATGTCAGATGGAGAAATCCTGCAAGCAGCTCCTTACCAAGAGTTATTGGCATCAAGCCAAGAGTTTCAGGATCTCGTCAACGCACATAAGGAAAC AGCAGGAGGCTCCGAAAGACTTGCTGAAGTTACTGAAGCACAGAAACAAGGATCATCAACTTCCAAGGAGATCAAGAAAACTTACGTGGAAAACCAACAA AATCAGGTGCTAGCCAAAGGCGATCAACTGATTAAGCAGGAAGAAAGGGAAGTAGGGGACACAGGATTCAAGCCTTATATTCAGTACCTGAGTCAGAACA AAGGATACCTCTACTTCGCCTTAGCTGCTGCAAGCCACCTGATGTTTGTTGGTGGTCAGATATCACAAAACACATGGATGGCTTCCAATGTCGACAATCC CAACACTTCAACATTGAAGCTGATAGGAGTCTACTTGTTGATTGGAGTCGGGTCAGTTTTGTTTCTGCTTACCAGAGCTATGGCCACTGTTGTTTTGAAT ATGCAGTCTTCAAGGTCGCTGTTCTCCCAGCTGCTGAATTCCCTTTTCCGAGCACCCATGTCATTCTATGATTCTACACCTCTTGGACGAATACTTAGTC GGGTATCTGCTGATCTTAGCATTGTGGATCTTGATGTACCTTTCTGCTTCATCTTTGCTGTTGGGGCGACTTCAAATGCCTATGCCAGCCTTGGAGTTCT GGCTGTTATCACTTGGCAAGTCTTGTTTGTGTCCATACCGATGATTTATCTCGCAATTCGCTTGCAGAAATACTACTTTTCATCTGCAAAAGAGTTCATG CGGATCAACGGGACAACCAAGTCATATGTGGCCAATCATTTGGCAGAATCTGTAGCAGGGGCAGTAACAATACGAGCTTTCAGGCAAGAAGAACGTTTCT TCGCCAAAAGCTTACACCTAATTGACACAAATGCCAGTCCTTTCTTCCACAGTTTCACAGCAAACGAGTGGCTGATTCAACGGTTGGAAACAATGTGCGC TGTCGTTCTTGCTTCTGCAGCTCTCTGCATGGTTTTGTTGCCTCCAGGAACTTTCAGCTCCGGGTTCATCGGAATGGCACTCTCCTATGGTCTCTCCCTG AACATGTCCCTTGTTTTCTCGATCCAAAACCAGTGCACATTAGCAAACTACATCATCTCAGTTGAAAGGCTCAACCAATACATGCATATACCGAGTGAAG CCCCTGAAGTAATTGAAGATAACCGTCCCTCTCCCTCCTGGCCATCAGTTGGCAAAGTGGAGATCTATGACTTAAAGATAAGGTATAGGCCTGATACACC ACTGGTTCTCCGGGGTATTAGTTGCACATTCCAGGGAGGGCACAAGATCGGTATCGTTGGCCGAACTGGAAGTGGGAAGACAACTCTCATCGGTGCCCTC TTCCGTCTGGTGGAGCCAGCAGGAGGAAAGATTGTTGTGGATGGTATTGACATATCCAAAATAGGGCTGCATGATCTTAGGTCAAGATTCGGGATAATAC CTCAAGATCCAACTCTATTCAATGGAACTGTTAGATACAACTTGGATCCTCTAGCTCAACACACTGACCAGGAGATATGGGAGGTTCTTGGGAAGTGTCA ACTGCGAGAGGTTGTCCAGGATAAGGCAGTGGGATTGGACTCATTAGTAATGGAAGATGGATCAAACTGGAGCATGGGGCAGAGACAACTGTTCTGCTTG GGGCGAGCGCTTCTAAGGAGAAGTCGAGTACTTGTGCTCGACGAGGCAACAGCTTCCATCGACAATGCAACTGACTCAATATTGCAGAAAACCATCAGGA CCGAGTTTGCAGACTGCACAGTCATCACAGTTGCTCACAGGATACCCACTGTCATGGACTGCACCATGGTCCTCGCCATTAAAGATGGGAAACTGGTAGA GTATGATGAACCAATGAAGCTAATGAAGAGAGAAGGCTCACTTTTCGGACAGCTCGTTCAAGAGTACTGGTCTCATTCCCAATCCTCGTAG
AA sequence Show only first row Show all	>Lus10039320 pacid=23175707 polypeptide=Lus10039320 locus=Lus10039320.g ID=Lus10039320.BGIv1.0 annot-version=v1.0 MEGFWEMFCGKSGTSPQEDNGGRRQLLLYSKSFFFLNHHEYSTASSCTSQALLICFDVLLLVLLLFNFIPSSSSSKMQRVGFRGIPKLGIVSALFNGCLG LVYLCLGVWDLEEKLPMKLWLPLFFQALTWSLIGLLISLFGTSLPRFRIRFLSISTLLFSGIVGGMSVFTAILNKRIDVKITADVLTFPGALLLTLCAYK VHSSNDEEIESENGGLYAPLNGDSNGINDEKHEKAIPFSKVGVLGTLSFWWLNPLMKLGREKTLEEEDIPNLRQADRAETCYTVFQEQLSKEEKQSQPSL LWTIARCHSRDIFVSGFFAFLKIVTASAGPLLLNAFILVAEGNASFQYEGYLLALTLFFSKSLESLSQRQWYFRSRLIGLKIRSLLTAAIYKKQLKLSNA SRLTHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCLSLIILFRAVGLATFAALAIIVLTVLCNAPLAKLQHRFQTRLMTAQDERLKACGESLVNMK VLKLYAWETHFKTVIEKLREVEYTWLRAVQLRKSYNSVLFWSSPVLVSTATFGACYFLKVPLHANNVFTFVATLRLVQEPVRSIPDVIGVVIQAKVAFAR IVRFLEAPELENGNVRQRSNLGGGVDSSSHAISIKSADFSWEENSSKPTLKNVDLEIRPGEKVAVCGEVGSGKSTLLAAILGEVPNTRGNGFYLDELQVQ VHGSIAYVSQTAWIQTGSIQDNILFGSAMDKQRYEDTLERCSLVKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTA TSLFNEYVMEALSMKTVFLVTHQVDFLPTFDAVLLMSDGEILQAAPYQELLASSQEFQDLVNAHKETAGGSERLAEVTEAQKQGSSTSKEIKKTYVENQQ NQVLAKGDQLIKQEEREVGDTGFKPYIQYLSQNKGYLYFALAAASHLMFVGGQISQNTWMASNVDNPNTSTLKLIGVYLLIGVGSVLFLLTRAMATVVLN MQSSRSLFSQLLNSLFRAPMSFYDSTPLGRILSRVSADLSIVDLDVPFCFIFAVGATSNAYASLGVLAVITWQVLFVSIPMIYLAIRLQKYYFSSAKEFM RINGTTKSYVANHLAESVAGAVTIRAFRQEERFFAKSLHLIDTNASPFFHSFTANEWLIQRLETMCAVVLASAALCMVLLPPGTFSSGFIGMALSYGLSL NMSLVFSIQNQCTLANYIISVERLNQYMHIPSEAPEVIEDNRPSPSWPSVGKVEIYDLKIRYRPDTPLVLRGISCTFQGGHKIGIVGRTGSGKTTLIGAL FRLVEPAGGKIVVDGIDISKIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLAQHTDQEIWEVLGKCQLREVVQDKAVGLDSLVMEDGSNWSMGQRQLFCL GRALLRRSRVLVLDEATASIDNATDSILQKTIRTEFADCTVITVAHRIPTVMDCTMVLAIKDGKLVEYDEPMKLMKREGSLFGQLVQEYWSHSQSS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G59140		ATMRP14, ABCC10	ATP-binding cassette C10, mult...		Lus10039320 [exp]	0	1
AT1G75130		CYP721A1	"cytochrome P450, family 721, ...		Lus10016310 [exp]	5.9	0.9182
AT5G61820			unknown protein		Lus10003210 [exp]	6.6	0.9077
AT5G58350		ZIK2, WNK4	with no lysine (K) kinase 4 (....		Lus10024192 [exp]	6.7	0.8991
AT1G76690		OPR2, ATOPR2	ARABIDOPSIS 12-OXOPHYTODIENOAT...		Lus10009473 [exp]	10.2	0.9079
AT4G39230			NmrA-like negative transcripti...		Lus10042312 [exp]	11.3	0.8910
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10010572 [exp]	13.0	0.8894
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10014831 [exp]	13.8	0.9018
AT1G10650			SBP (S-ribonuclease binding pr...		Lus10029136 [exp]	16.8	0.9013
					Lus10033269 [exp]	18.3	0.9094
AT1G11340			S-locus lectin protein kinase ...		Lus10007604 [exp]	19.5	0.8954

Compare expression of checked genes

Lus10039320 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.