Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G22790 1338 / 0 Kinase interacting (KIP1-like) family protein (.1) AT4G14760 1182 / 0 kinase interacting (KIP1-like) family protein (.1) AT1G03080 806 / 0 kinase interacting (KIP1-like) family protein (.1) AT4G02710 462 / 2e-139 Kinase interacting (KIP1-like) family protein (.1) AT2G22560 163 / 3e-40 Kinase interacting (KIP1-like) family protein (.1) AT5G10500 153 / 2e-37 Kinase interacting (KIP1-like) family protein (.1) AT1G09720 152 / 6e-37 Kinase interacting (KIP1-like) family protein (.1) AT2G30500 141 / 7e-35 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) AT5G58320 129 / 6e-31 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3) AT2G47920 103 / 3e-24 Kinase interacting (KIP1-like) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006606 [exp] 1142 / 0 AT3G22790 368 / 3e-111 Kinase interacting (KIP1-like) family protein (.1) Lus10041192 [exp] 1076 / 0 AT4G14760 744 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10021908 [exp] 1011 / 0 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10022079 [exp] 850 / 0 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10014687 [exp] 711 / 0 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10006896 [exp] 691 / 0 AT1G03080 927 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10042627 [exp] 443 / 4e-134 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Lus10006607 [exp] 245 / 9e-75 AT1G03080 83 / 5e-19 kinase interacting (KIP1-like) family protein (.1) Lus10002655 [exp] 147 / 4e-35 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G083300 [exp] 1858 / 0 AT3G22790 1306 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.008G156200 [exp] 1137 / 0 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.005G213400 [exp] 1102 / 0 AT1G03080 1399 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.002G049600 [exp] 1079 / 0 AT1G03080 1229 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.008G156250 [exp] 728 / 0 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1) Potri.005G147300 [exp] 158 / 1e-38 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1) Potri.007G011300 [exp] 156 / 4e-38 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.002G106400 [exp] 149 / 5e-36 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1) Potri.013G158100 [exp] 145 / 2e-35 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) Potri.019G131000 [exp] 144 / 3e-35 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07765 [flax] [poplar] KIP1 KIP1-like protein
Representative CDS sequence Show only first row Show all	>Lus10039359 pacid=23175526 polypeptide=Lus10039359 locus=Lus10039359.g ID=Lus10039359.BGIv1.0 annot-version=v1.0 ATGGCTACCTTACTGCATTCTGAGTCCAGGCGGCTCTATTCATGGTGGTGGGACAGCCACATACCAAAGAACTCCAAATGGCTTCAAGAAAATCTTACAG ATATGGATGCCAAAGTCAAAGCAATGATCAAACTGATAGAAGAAGATGCAGATTCATTTGCTAGGAGGGCAGAGATGTATTACAAGAAACGTCCAGAACT GATGAAGTTGGTGGAGGAGTTCTATAGAGCTTACCGTGCACTAGCAGAGAGGTATGATCATGCTACAGTGGAGCTTCGTCACGCTCATCGAACCATGGCA CAAGCATTTCCCAATCAGGTGCCTTATGATATGGCTGATGACTCCCCTTCGGGCCAGGAGGGTGAGCCTCATACACCAGAAATGCCTCATCCTATTCGTG CTTTGCTTGAACTAGATGACTTGCAGATGGAGGAATTGGGGCTCTCTTCATCTTTCAAGGATAATGGAGGTTTAAAGCAGCTCAACATGATGTTTGGGTC AGGAGTAACAGATCCAAAAGTTCCTGAAGGAAAGGCGAAAAAGGGTCTAAAAGTACGCGAACTGGCAGAGAGTAAAAATGCACAACTAGCTGAAGCAGAA GTTCAGACGTTGAAGAAAACTCTTGGTCAGATTCAATCTGAAAAGGAAGCTCTTCTTCTTCAGTACCAGCAGAGCTTGGATAAACTTTCCTGCTTGGAGA AGGAACTTAAAGAAGCTGAGGGGCTTGATGAACGAGCAAGCAGAGCTGAGATTGAGATTGAGGTACTAAAGGAAACGCTTGTCAAGCTAGAAGCGGAGAG AGATGCTGGTCTTCTTCAGTACAACCATTGCTTGGTTAGGATATCCAGCATGGAGAATATGATGTCTCAGACTGAAAAACATGCTAAAGGACTTAACGAG CGAGCAATCAAAGCCGCAACAGAATCACAGAATCTCAAGCAAGAACTTTCAGGATTGAAGGCTGAAAATGAAGCCCGTCTTCTTCAGTATAATCAATGTC TTGAAATGATATCCCTTTTGCAGAAAAGAATTGCTCTTGCAGAGGAAAATGCCAGGATGCTTAGTGAGCAAGCTGAGAAAGCAGAAAGTGAAGTTAAATC TCTAAGGCAAGCTATTGCTGAGCTGAAGAAGGAGAAAGAAGATGCAGAAATACAATACAAGCAGTGCTTGGAGAAATTAACCATGATGGAGAGTGAAATT TCTCGAGCGCAAGAGGATGTCAATCGACTTAAGAGTGAAGTCTTGATGGGGGCTGCAAAACTGAAAGGCACAGAAGAACAGTGTTTTCTGTTGGAGAAGA CAAATCAATCTCTGCAGTTGGAAGCGGAAAATCTGATCCAGAGGATCGCAAAGAAGGATGAAGAGCTTTCAACGAAGGAATTTGAGTTGGACAAAGTTCA TACTTTACTGGAAGACGAGAAGTCGCAGTTTGCTGAAGTTGAAGCTAGCCTACAAATCTTGCAGAAGCTACACTCACAGTCACAAGAGGAGCAGAAAGCT TTGGCTCTAGAGCTGCAGACCAAGCTTCAGATGTTGAAGGATATGGAGTTATCCAACCTCAAGTTACAGGAAGATCTGCACCGAGTCAAGGATGAGAATC AAATCCTCAACGAGTTAAACAGTTCTTCTGACATCTCCATCATCAACTTGCAAAACGAAATTTCTAGCCTGAAGGAAATGCAGGAGAAGCTTGAAGAGGA AATGACAGTGCAGGTAGCCCAAACTGATTCCTTGCAACAGGAGATTTTGCGTTTAAGGGGAGAGATTGATGCCATGAATAGGAGGTATCAAGGTTTAATG GAACAAGTGTGGTCTGCTGGTGTGAATCCTGACTGCCTTGGTTCATCTTTTAAACAATTGCAAGATGAAAACATGAGACTGAAAGACGCATGTGAAAAGG ATAATGGTGAAAGCAAAGTTCTGCATGCAAAGTTGAGGGATATGAATCAGCTCCTTGAGAAGAATGTGGCTTTGGAGAGGTCTCTGTCAGAAATGAATGA CATACTGGAAGGCTCAAGAGAAAAGGCCACGGAATTGCAGGATTCTTGCAAGCTCCTCCAGGGAGAAAAGACCGGACTTATCGCTGAAAAGGGAATTCTG CTTTCCCAGCTACAGCTTATGAACGAGCATATGCAGAAACTCCTGGAGAAAAATACTCTGGTTGAGAACTCTCTTTCTGGTGCCAATGTTGAGCTTGAAG GTCTCAAGACAAGGAGCAGAAGCCTAGAAGAACTGTGTGAAATGCTGAAGGATGAAAAATCCAGCCTTCTGAATGAGAAAAGCACCTTGGTTTTGCAGCT AGAAGCTGTTGAACAGAGACTTGCAAACCTTGAAAGGAGATTCACAAGATTGGAAGAGAAGTATACCAATCTTGAGAAGGAGAAAGAATTCACACTATTC CAGGTTAAGGAATTGTATGGATACCTTGGAACAGAGAAACAGGAACGTGCATGCTATATGCAATCAAGTGAGTCTCGGTTGGCAGAACTTGAAAACCAGG TTCAGGCATTACATGAAGAAGGTCAGTTGAGGAAGAAAGAATTTGAAGAAGAACTTGATAAAGCTGTTAATGCTCAGGTTGAGGTCTTCATCTTACAGAA GTTCATCGAAGATTTAGAACAAAAGAACCTTGTATTGTTGCGTGAATGCCAGAAACATGCTGAGACTTCCAAACTGTCAAACAAAGTGATATCAGAATTG GAGTCTGAGAATCTGGAGCAGCAGGTGGAAGTGGAATTCCTGTTGGACGAGATTGAGAAGTATAGAATGGGTGTTCATCAAGTGTTCCAGTCACTTCAGT TAGATCCAATCGATGAGGATGAACAAGGAGCTGATAATGGCCAAGTTTCTATCGGGCGTATACTAGACAACATTGAGTACATAAAGGGCTTGCTCCAGAA AGAGGAGGATGAGAAGCAGCTAATGGCAGTTGAGAACATGGTGGTCTCAACCTTATTTGAACAATTGAAATCCGATGGTGCTGAACTTGAGTCTGAGAAA AAAGTTCTGGAGCAGGAGTACAAAGCAACGACAGAACACTTCACTGTTCTTCAGCTGGAAAATCATGAACTCAAGGAGATGAGTAGACAGTTGAATTTGG AAGTGAGCGAAGGAGAGCTGCAGAAGGGAGAATTAAAGGTTGAGTTAGAAACTCAGCAATTGAACCTGGAAAATCTGCAAGGTTCTTACATCTCATTGCA AGAAGAGAACTTCAAAGTGCTTAACGAAAATAATTTTTTGCAACAGAGGTTCTTAAACTTGAAAAGGGAAATGCTTAAGCTTGAGGAGGAAAACAACAAC ATCATCCAGGAAGCTACATCTCTGGCAAACCTGTCATCTGTTTTAGAGAGTTTTGGAAAGCAAAAGGCCGAGGAACTCGGAGCACTTTCTGGAGATGTCA GTCATCTCAGGTCTATTAACGGTGAACTCAGCAAGAAGATAGAGATGTTGGAGACGATGTTGGAAACCAAAGAATCGGAGTGTTCACATCACAAAGAAAC AATCCAGAAGTTGCAACTGGACCTGCAGAACGGTCAAGAACTAAATGACCAATTAAGATATGAAATTGTGATCGGAAAAGACTTTTTGGGAACGAAAGCA TCAGAGCTTCTAGAAGTGAAGCAAAACTTGAAGGCCACTCAGGAGTTGAATGCAGAATTCTGTAGAACCCTTGAGGAACTAAAGAGGGAATCTGAAGAAT CTGGTTTAGTTAGAGAAAAGTTAGAGAAGCAGATTTCTCAATTATCTGATGAGAACACAACCTGCAAGGTGGAACTTGAACAGCTTCACGTAGCAAATGA AAATCTGGAGTCAGAAGTGACCACATTGCGCAAGGATATTGAAGAACACAGGGTTAGAGAAGAAACTTTAAGTCTTGAGCTACAAGAGAGAAGTAATGAT TCCGAGCTCTGGGAGGCTGAGGCTTCATCATTTTTCTTCGATCTTCAAATATCCTCGATCCGGGAGGTCCTGCTTGAGAAGAAAGTTCATGAGCTCTCTG CAGTTTGTGCAAGCCTTGGAGATGAAAATGCAACAAAAGAAGGGGAGATTGGACAGATGAAAGCAAAGTTTGTTTCTTTGGAATGTGAAATTGAAGGACT CAATTCTCAGTTGTCTGCATATGCTCCAGCCATAGCCTCCTTGAAAGATAACATTGAATCCCTAGAGCAGAATGCTCTTCTTCGGGTAAAACTTTCTGCA GCTGGTGAAGATAACCAGAAGAATGTGGAAATGGCCACTGAAATTTTCGAAGCAAGTAATGAAGAACTCATAAACGATCAGCCAGGTGTGGCGGCAGATG CGATGTCAGATTTGCTAAGGATGCTACCAAGGGTTAAAACAGTGGAAAAGGCAATGCTTGAAGAAATCAATAGGCTTGAAGCTGAGAAGGCGACAGCAGT GAAGGAGAACCTTGGAATGGTGAAGTCGAGGAGGAGACCAAGCCGCGGAGACAGCTTTAACAAGAGAGAAATAGTGCCTGAGAATGATTCAACTGACAGT ACTAATTCACAGAAGAACAAACCTGAGACACCTGAAGCAAAGAACAGCATTCTGATGAAAGATATTCAACTCGATCAGGCCTCAGGTAGTTCTTCACGCA GAAGGATTAAAAGGGACGTCTCCAGAGCTGATGATCAGATGCTTGAGCTGTGGGAATTTGCTGAGAAAGATAACACCCTTGTTCCAGCAGTTCACCACCA CACCCGAAACCACAGTGGTCCACGGTTGGTTCGCAATCAGTCCAGAGGTTCAAGGTCGAGGCGGAAGAATTCTTGCTCATCAGCTCCTTCTGAGAAGGAA GTAGGGATCGACAAGCTAGAGATACCTGGTTCCATTACCATCACCAAACAGCCCAGCAAAGAGAGAGGAGCCCATGGAAAGATCATGGAGAGGCTCACTT CTGATGGAAAGAAGTTGTCATCTCTTTACACATCCGTGCAAGACATGAAAGCCAAACTAGAAGTGGCAAGGAAATTGAGCAAGAAACCAAACATCATTGA GTTGGAAAAGGTGAAGATGCGGCTGCAAGACGTGGAAGAGGCAGTTGTCCAGCTGGCTGAAGCTAATGATCATCTGAGGAAGGATGTTGGGGAGAGGTCC ACCTCATCTCCAGAAGAGATGATGATTGCAGCAGAGAGAAATGGAGTAACTGAACAGGCAAGGAAAGAGTCAGAGAAGTTGGGAAGGTTGCAGTTTGAAG TGCAGAACATCCAATACGTGCTGCTGAAACTCGATGGCGAGAACGACAAGAATGGGAAGAAGAACAAGGTGCAGAGGTTTTATGGGAGCAGAACAGGAGT GTTGTTAAGGGATTTCATCAGCAGTGGGAAGAGGAGGAGCTTGAGGAGAAAGAAGAAGTCTTGTTTCTGCGGATGTGGGAGACCGGCAGCCATTGAAGAT TGA
AA sequence Show only first row Show all	>Lus10039359 pacid=23175526 polypeptide=Lus10039359 locus=Lus10039359.g ID=Lus10039359.BGIv1.0 annot-version=v1.0 MATLLHSESRRLYSWWWDSHIPKNSKWLQENLTDMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATVELRHAHRTMA QAFPNQVPYDMADDSPSGQEGEPHTPEMPHPIRALLELDDLQMEELGLSSSFKDNGGLKQLNMMFGSGVTDPKVPEGKAKKGLKVRELAESKNAQLAEAE VQTLKKTLGQIQSEKEALLLQYQQSLDKLSCLEKELKEAEGLDERASRAEIEIEVLKETLVKLEAERDAGLLQYNHCLVRISSMENMMSQTEKHAKGLNE RAIKAATESQNLKQELSGLKAENEARLLQYNQCLEMISLLQKRIALAEENARMLSEQAEKAESEVKSLRQAIAELKKEKEDAEIQYKQCLEKLTMMESEI SRAQEDVNRLKSEVLMGAAKLKGTEEQCFLLEKTNQSLQLEAENLIQRIAKKDEELSTKEFELDKVHTLLEDEKSQFAEVEASLQILQKLHSQSQEEQKA LALELQTKLQMLKDMELSNLKLQEDLHRVKDENQILNELNSSSDISIINLQNEISSLKEMQEKLEEEMTVQVAQTDSLQQEILRLRGEIDAMNRRYQGLM EQVWSAGVNPDCLGSSFKQLQDENMRLKDACEKDNGESKVLHAKLRDMNQLLEKNVALERSLSEMNDILEGSREKATELQDSCKLLQGEKTGLIAEKGIL LSQLQLMNEHMQKLLEKNTLVENSLSGANVELEGLKTRSRSLEELCEMLKDEKSSLLNEKSTLVLQLEAVEQRLANLERRFTRLEEKYTNLEKEKEFTLF QVKELYGYLGTEKQERACYMQSSESRLAELENQVQALHEEGQLRKKEFEEELDKAVNAQVEVFILQKFIEDLEQKNLVLLRECQKHAETSKLSNKVISEL ESENLEQQVEVEFLLDEIEKYRMGVHQVFQSLQLDPIDEDEQGADNGQVSIGRILDNIEYIKGLLQKEEDEKQLMAVENMVVSTLFEQLKSDGAELESEK KVLEQEYKATTEHFTVLQLENHELKEMSRQLNLEVSEGELQKGELKVELETQQLNLENLQGSYISLQEENFKVLNENNFLQQRFLNLKREMLKLEEENNN IIQEATSLANLSSVLESFGKQKAEELGALSGDVSHLRSINGELSKKIEMLETMLETKESECSHHKETIQKLQLDLQNGQELNDQLRYEIVIGKDFLGTKA SELLEVKQNLKATQELNAEFCRTLEELKRESEESGLVREKLEKQISQLSDENTTCKVELEQLHVANENLESEVTTLRKDIEEHRVREETLSLELQERSND SELWEAEASSFFFDLQISSIREVLLEKKVHELSAVCASLGDENATKEGEIGQMKAKFVSLECEIEGLNSQLSAYAPAIASLKDNIESLEQNALLRVKLSA AGEDNQKNVEMATEIFEASNEELINDQPGVAADAMSDLLRMLPRVKTVEKAMLEEINRLEAEKATAVKENLGMVKSRRRPSRGDSFNKREIVPENDSTDS TNSQKNKPETPEAKNSILMKDIQLDQASGSSSRRRIKRDVSRADDQMLELWEFAEKDNTLVPAVHHHTRNHSGPRLVRNQSRGSRSRRKNSCSSAPSEKE VGIDKLEIPGSITITKQPSKERGAHGKIMERLTSDGKKLSSLYTSVQDMKAKLEVARKLSKKPNIIELEKVKMRLQDVEEAVVQLAEANDHLRKDVGERS TSSPEEMMIAAERNGVTEQARKESEKLGRLQFEVQNIQYVLLKLDGENDKNGKKNKVQRFYGSRTGVLLRDFISSGKRRSLRRKKKSCFCGCGRPAAIED

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G22790			Kinase interacting (KIP1-like)...		Lus10039359 [exp]	0	1
AT3G22790			Kinase interacting (KIP1-like)...		Lus10006606 [exp]	2.4	0.8897
AT5G43810		PNH, ZLL, AGO10	ZWILLE, PINHEAD, ARGONAUTE 10,...		Lus10006627 [exp]	6.0	0.8636
AT2G40030		NRPE1, DMS5, AT...	DEFECTIVE IN MERISTEM SILENCIN...		Lus10016332 [exp]	6.6	0.9031
AT2G40030		NRPE1, DMS5, AT...	DEFECTIVE IN MERISTEM SILENCIN...		Lus10002748 [exp]	10.4	0.9014
AT3G27520			unknown protein		Lus10022283 [exp]	11.0	0.8091
AT4G36090			oxidoreductase, 2OG-Fe(II) oxy...		Lus10028671 [exp]	11.8	0.8506
AT2G36490		DML1, ROS1	REPRESSOR OF SILENCING1, demet...		Lus10035576 [exp]	12.3	0.8761
AT5G65930		PKCBP, ZWI	POTATO KINESIN-LIKE CALMODULIN...		Lus10006064 [exp]	12.7	0.8591
AT5G43900		XI-6, XI-2, ATM...	MYOSIN XI-6, MYOSIN X1 2, ARAB...		Lus10043153 [exp]	14.0	0.8362
AT2G28550	AP2_ERF	TOE1, RAP2.7	TARGET OF EARLY ACTIVATION TAG...		Lus10015055 [exp]	15.6	0.8386

Compare expression of checked genes

Lus10039359 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.