Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G51970 306 / 9e-103 ATASAT1, ASAT1, ATSAT1 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) AT5G55350 269 / 2e-88 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55340 268 / 2e-88 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55360 259 / 9e-85 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34520 255 / 5e-83 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55380 253 / 3e-82 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55330 237 / 9e-76 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT5G55370 234 / 1e-74 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34500 233 / 2e-74 MBOAT (membrane bound O-acyl transferase) family protein (.1) AT1G34490 223 / 1e-70 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10022293 [exp] 192 / 1e-60 AT5G55340 178 / 2e-55 MBOAT (membrane bound O-acyl transferase) family protein (.1) Lus10003655 [exp] 134 / 2e-38 AT5G55380 126 / 5e-36 MBOAT (membrane bound O-acyl transferase) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G055100 [exp] 414 / 6e-145 AT3G51970 330 / 8e-112 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014600 [exp] 351 / 4e-120 AT3G51970 299 / 1e-99 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.009G055000 [exp] 324 / 6e-110 AT3G51970 314 / 7e-106 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.009G054900 [exp] 322 / 1e-108 AT3G51970 280 / 1e-92 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.001G106800 [exp] 317 / 6e-107 AT3G51970 255 / 1e-82 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.001G260700 [exp] 305 / 3e-102 AT3G51970 268 / 2e-87 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.016G014700 [exp] 302 / 8e-101 AT5G55340 242 / 1e-77 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.006G009800 [exp] 287 / 5e-95 AT3G51970 244 / 3e-78 ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1, acyl-CoA sterol acyl transferase 1 (.1) Potri.008G145700 [exp] 280 / 2e-92 AT5G55340 264 / 1e-86 MBOAT (membrane bound O-acyl transferase) family protein (.1) Potri.006G009600 [exp] 134 / 9e-37 AT5G55360 145 / 3e-41 MBOAT (membrane bound O-acyl transferase) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0517 [flax] [poplar] MBOAT-like PF03062 [flax] [poplar] MBOAT MBOAT, membrane-bound O-acyltransferase family
Representative CDS sequence Show only first row Show all	>Lus10039576 pacid=23165193 polypeptide=Lus10039576 locus=Lus10039576.g ID=Lus10039576.BGIv1.0 annot-version=v1.0 ATGGAAGGAGGAGAAATTGACAAGTTCATCAAGGTATGGGCATCAGTCTTAATCTCCCTAACCTACTGTTACGCCATTCCAAACTCAATCCCTAAAGGCC CCAAACGACTTGTTTCCATCCTCCCCGTCGTCGCTTTCTTCCTCTACCTCCCTCTCCACCTCACCTCCGTCCACCTAGGAGCCATCACCGCCTTCTTCAT CGCTTGGCTTGCCAATTTCAAGCTCCTCCTCTTCTCCTTCGGCAAAGGCCCCTTATCTAATCGTCCGCCGCTGTCACTCCCCTTATTCATCGCCGTTGCT TGCCTGCCAATCAAGATCCAGCAAGACAAGAACCCCTCTGCCACGTCATCCAGCAGAGAGGGCCCACTTAATTATACACTCAAGGCCCTGTCGGTAGCCG TATTGGTACGCGTATACGACTACAGCGACCGTATCCATCCCAAACTCCTCCTAATCCTCTACGGCATCCACACCTACTTCCTGCTGGACCTCATCCTCGC CGTCTCCGCCGCCGCCGCCCGGAATATCCTCGGTTTGGAACTTGAACCGCACTTCAACGAGCCCTACCTCGCCACGTCGCTCCAGGAATTTTGGGGGAGG AGGTGGAACCTGATCGTCAACCGGATCCTCCGACCCACCGTATACGACCCGATCCGGGCTAGATGGGCCCCGCTTCCGGCGGTTTTTGCTACGTTCGTGG TGTCGGCTTTGATGCACGAGCTCGTACTCTATTATATGACCCGAACGAGGCCAAGTTGGGAGATGACGGGGTTTTTCTTGCTCCACGGAGTGTGTGTGGC GGCGGAAATTGTGGTGAAGAAGACATTCGTCACCGAGGAACGGCAGATGCCGAAGGTGGTTTCCAGAGCGTTGACCGTTGGGTTTGTGTTGGGGACTGGG ACCTGGCTGTTCTTCCCGACATTCGTGGAGGGTAAGCTGGACGTTAAGGCGTCTGAGGAGTACGCAGCGGTGGGCGAGCTCTTGATTAGTGTGAGCCAGT GGGTTGTTTCTTTCGTCCATCCGATGGGATCCAGCCGTTAA
AA sequence Show only first row Show all	>Lus10039576 pacid=23165193 polypeptide=Lus10039576 locus=Lus10039576.g ID=Lus10039576.BGIv1.0 annot-version=v1.0 MEGGEIDKFIKVWASVLISLTYCYAIPNSIPKGPKRLVSILPVVAFFLYLPLHLTSVHLGAITAFFIAWLANFKLLLFSFGKGPLSNRPPLSLPLFIAVA CLPIKIQQDKNPSATSSSREGPLNYTLKALSVAVLVRVYDYSDRIHPKLLLILYGIHTYFLLDLILAVSAAAARNILGLELEPHFNEPYLATSLQEFWGR RWNLIVNRILRPTVYDPIRARWAPLPAVFATFVVSALMHELVLYYMTRTRPSWEMTGFFLLHGVCVAAEIVVKKTFVTEERQMPKVVSRALTVGFVLGTG TWLFFPTFVEGKLDVKASEEYAAVGELLISVSQWVVSFVHPMGSSR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G51970		ATASAT1, ASAT1,...	ARABIDOPSIS THALIANA STEROL O-...		Lus10039576 [exp]	0	1
AT3G14180	Trihelix	ASIL2	Arabidopsis 6B-interacting pr...		Lus10025404 [exp]	3.7	0.7508
AT3G03890			FMN binding (.1.2)		Lus10010649 [exp]	13.0	0.7319
AT4G16060			unknown protein		Lus10016832 [exp]	14.0	0.6874
AT4G25000		AMY1, AMY3, ATA...	alpha-amylase-like (.1)		Lus10042655 [exp]	19.8	0.7170
AT4G05000		VPS28-2, VPS28-...	vacuolar protein sorting-assoc...		Lus10011243 [exp]	27.2	0.6978
AT5G35390			Leucine-rich repeat protein ki...		Lus10022946 [exp]	30.2	0.7016
					Lus10025813 [exp]	33.2	0.6939
AT5G55130		SIR1, CNX5	SIRTINOL RESISTANT 1, "co-fact...		Lus10000697 [exp]	39.0	0.6705
AT2G35605			SWIB/MDM2 domain superfamily p...		Lus10034774 [exp]	39.1	0.6632
AT4G32920			glycine-rich protein (.1.2.3)		Lus10000229 [exp]	42.4	0.6865

Compare expression of checked genes

Lus10039576 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.