Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G15180 2217 / 0 SDG2, ATXR3 SET domain protein 2 (.1) AT3G59960 68 / 2e-11 SDG24, ASHH4 SET DOMAIN PROTEIN 24, histone-lysine N-methyltransferase ASHH4 (.1) AT1G77300 69 / 5e-11 ASHH2, CCR1, SDG8, EFS, LAZ2 LAZARUS 2, CAROTENOID CHLOROPLAST REGULATORY1, ASH1 HOMOLOG 2, histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.1), histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.2) AT2G44150 65 / 3e-10 SDG7, ASHH3 SET DOMAIN-CONTAINING PROTEIN 7, histone-lysine N-methyltransferase ASHH3 (.1) AT4G30860 63 / 2e-09 SDG4, ASHR3 ASH1-related 3, SET domain group 4 (.1) AT5G42400 63 / 3e-09 SDG25, ATXR7 ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 (.1) AT1G76710 60 / 2e-08 ASHH1 ,SDG26 ASH1-RELATED PROTEIN 1, ASH1 RELATED PROTEIN 1, SET domain group 26 (.1.2) AT1G05830 58 / 1e-07 SDG30, ATX2 SET DOMAIN PROTEIN 30, trithorax-like protein 2 (.1.2) AT5G53430 55 / 1e-06 SET29, ATX5, SDG29 SET domain group 29 (.1) AT4G27910 55 / 1e-06 SDG16, ATX4 SET domain protein 16 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018496 [exp] 3315 / 0 AT4G15180 2019 / 0.0 SET domain protein 2 (.1) Lus10028662 [exp] 77 / 2e-13 AT1G77300 774 / 0.0 LAZARUS 2, CAROTENOID CHLOROPLAST REGULATORY1, ASH1 HOMOLOG 2, histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.1), histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.2) Lus10000967 [exp] 77 / 2e-13 AT1G77300 748 / 0.0 LAZARUS 2, CAROTENOID CHLOROPLAST REGULATORY1, ASH1 HOMOLOG 2, histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.1), histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.2) Lus10025172 [exp] 74 / 2e-12 AT5G42400 501 / 6e-165 ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 (.1) Lus10016051 [exp] 71 / 1e-11 AT5G42400 362 / 9e-104 ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 (.1) Lus10039118 [exp] 66 / 1e-10 AT2G44150 434 / 1e-152 SET DOMAIN-CONTAINING PROTEIN 7, histone-lysine N-methyltransferase ASHH3 (.1) Lus10038740 [exp] 67 / 2e-10 AT2G44150 399 / 5e-137 SET DOMAIN-CONTAINING PROTEIN 7, histone-lysine N-methyltransferase ASHH3 (.1) Lus10016600 [exp] 66 / 3e-10 AT1G76710 600 / 0.0 ASH1-RELATED PROTEIN 1, ASH1 RELATED PROTEIN 1, SET domain group 26 (.1.2) Lus10010121 [exp] 62 / 5e-09 AT3G61740 1008 / 0.0 SET domain protein 14 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G041100 [exp] 2875 / 0 AT4G15180 2386 / 0.0 SET domain protein 2 (.1) Potri.007G119300 [exp] 2873 / 0 AT4G15180 2427 / 0.0 SET domain protein 2 (.1) Potri.005G182100 [exp] 77 / 2e-13 AT1G77300 807 / 0.0 LAZARUS 2, CAROTENOID CHLOROPLAST REGULATORY1, ASH1 HOMOLOG 2, histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.1), histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.2) Potri.005G260100 [exp] 76 / 3e-13 AT5G42400 397 / 5e-117 ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 (.1) Potri.002G001000 [exp] 76 / 3e-13 AT5G42400 385 / 3e-112 ARABIDOPSIS TRITHORAX-RELATED7, SET domain protein 25 (.1) Potri.002G079100 [exp] 74 / 2e-12 AT1G77300 820 / 0.0 LAZARUS 2, CAROTENOID CHLOROPLAST REGULATORY1, ASH1 HOMOLOG 2, histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.1), histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) (.2) Potri.007G147200 [exp] 68 / 3e-11 AT2G44150 477 / 2e-169 SET DOMAIN-CONTAINING PROTEIN 7, histone-lysine N-methyltransferase ASHH3 (.1) Potri.017G000400 [exp] 64 / 5e-10 AT2G44150 471 / 5e-167 SET DOMAIN-CONTAINING PROTEIN 7, histone-lysine N-methyltransferase ASHH3 (.1) Potri.005G195400 [exp] 62 / 3e-09 AT1G76710 657 / 0.0 ASH1-RELATED PROTEIN 1, ASH1 RELATED PROTEIN 1, SET domain group 26 (.1.2) Potri.018G102100 [exp] 59 / 2e-08 AT4G30860 585 / 0.0 ASH1-related 3, SET domain group 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00856 [flax] [poplar] SET SET domain
Representative CDS sequence Show only first row Show all	>Lus10039707 pacid=23165311 polypeptide=Lus10039707 locus=Lus10039707.g ID=Lus10039707.BGIv1.0 annot-version=v1.0 ATGACGCCAACGGGTACCATTGATGAGAAAAAGGACGTAGTCGCTGCTAGTGCTGCAGCTGCTACCGCCACAACGTTGACAACTGTCAGTAATGGGAAAA CAACAACAACAAAGCCGAAGAAGATACTGAGGAAGATAATCACGGTTAAGAAGGTCATCAGGAGGGTGCCTGTGAGTGAATTGCGGAAGAAGAAGGAAGC GGAGAGTCTCAAGGCAGCAGCAGCAGCAGCTGAGACAACGAAGAGCACTGGAGGAGTTGACGGGAAGAGTGACTTGGTGACACCTGGAAAGGAAGGTGAG AACGTTGACAGCAAGGTGCAGAATGGCAAGGAAGAAGTTGAAGAAGGTGAATTGGGCACTTTGAAGTGGCCACCATCCAGGGTTGAAGTTGAAAAGGGAG AGTTTGTTGTTCCGCAGAGGAGAAGTGAGATCGAGAAGGAGGAGATTGCTGGGGATAAGTGGATGAGAAGAGGGGAGGTTGACAAGGGACAGCATCAGAA CGTTTCGGGTAAATGGCGCCAATGGGAATTTTCCAGAGATGAAGTCGAGAAGGGAGAATTCATTCCTAACAGGTGGCATCAGGGTAAGGAAGAATACAGT TATAGCAAGTCCCGTGGGAAATATGATTCTTCTTCTTCTAAAGATCGGACGCCGCCTTCTGGAAGGTATCAAGCTGAAGAAAGTTACGTTCGGAAAGATG GATGTCGAGGCGGTAATTCTCAGCAGCATGCCAAAGGTTCTTTGAGGTGGGAGAATGGTCAAGAGAGGGGAGGTATAAGGATCAGCTCAAAGATAGTGGA TGACGAAGGCTCTTATAAAAGTGGCGAGTATATTAATGGTAAGAATAATCACGTGAGAGAGCACTCCACTTCTGCTAACAGGTTGAAGAGGCATGGCACA GATTCTGATAATAATGACAGGAAGCATCATGCAGATTATGGGGATTACGCTGGTTCAAAAAGCAGGAGGCTTTCTGACGACAGTTCTCGTTCTTCTAATT CTGATCACCATTCTCGTCACTCTGCGGAGAGATATGTTAGAACTCCTTCATCAGCAAACAAGTATTCCGCAAGGTATCATGAGCCTACTCTGTCATCCAA AGTGGTTTTTGAAAGGCAGCAGCCGGAGCGGTCCCCACGAAATCGAAGCCGTTATGATCACAACAGAGAACGGAGTCCAACACACCGTGACCAATCTCCG CATGGTAAAGAAAGGGTTTCCCATGGACGTGATAGATCTTCTTACGGTCGAGAAAAGTCGCCACATGGACGAGAACGATCTCCTCATGCTCGTGAGAAGT CCCCTTTTGTACGTGAGAGATCTCAGAATTTACGTGAGAAATCCCCACATGAGCGCAGCCGCCATCATGAACGCCGAAGCAGGACCCCTAGTTATACAGA GCGGTCCCCTCAAGATAGATCTCGCAACCATGAGCGCAGGGATCAAACACCAAACCGCCTGGAGAAGTCTCCGCTCGGTCGAGGTAAGCTTAATACCCCC AAGGAAACGAGTCGGAAAAGTGGAGGAAGTGACAAACGAAATTCTGGGGACAAAGGGCAGGAGGATAGACTCGGCCAAAGGGATGCAAATGTAAGAGATA CACAGTTCACAGCCAAAGAGGATGAAGAAAGAAGCAGTACACTAATATCTGATGGACTAGGTCTGAAAAATGCAGATTGTGAGACCCGAAAAGCAGAGAA GCTCGAGTGTCCTAAAATAGATAGCAAAGACTCTCCTTTGGCTGAAGCACCATTCCTAGAAGAACTGCAGTCTATGGAGGAGGATATGGATATATGTGAC ACTCCGCCTCATGCCCCAGTTGTAGCTGATTCGTCAACTGGGAAGTGGTTCTACCTTGACTACTTTGGTGTTGAACGTGGGCCTGCGAAGTTGTCGGACC TTAAGGGGCTTGTGGATGAAGGAGTTCTTGTCTCAGATCACTTGATTAAGCATTTGGATAGCGATAGGTGGATGACTGTTGAAAAGGCAGTTTCTCCAAA AGAAACAGCCAATTCCACTTCCATTGTGTCTGAGTCAATTACTCAGCTTGTTAGTCCTCCTGAAGCACCTGGTAATGTTTTGACGGATGGTGGGGATGGA CTTTCTGTTTCTCGTGATGGTGAAGAAGTGCCCATAAATTTAGCAGAGCCGCAGAAATGCCCCGATGTCTATTCATCTGATCTCCATATTGATGAGAGGG TGAAGAACTTGGTGGACGGTGTTTCCCTTATTCCAGGCAGGGAACTTGAGACTATTGGAGAGATTTTGCATACAACATTCTCGCAAGTACAGTGGGATGA ATGGGCAAAAGGTTATAGTCAGCATGAAACTTCTCCTCATAATCAAAGAGATGACACATCACAAGCTTTAGAAACGAAGCTGATCGAAGCTGTTGAAATG AGATCAAGTTTTATACACGAGAAAGATAACGGTTTTGAATCTTCTGCTGACCCAGCTGACTGGTTTTCTGGACGATGGTCTTGCAAGGGGGGTGACTGGA TTAGGAATGATGAGGGTGTTGATAGATTTTCTAGAAGAAAAATGGTCCTTAATGATGGTTTTCCATTGTGCCTGATGCCAAGATCTGATTTAGAGGACCC TAGATGGCAAAGAAAAGAGGATCTGTATTATCCATCCCATAGCAGAAAGCTTGAACTTCCTCCTTGGGCGTTTTCCAGTCAAGACGAGAAGAATGGAAGT GCTGGTGCCAACAGATCAAATCCTGCTAAGCCTCATGTTGTAAGGGGAGTGCCGGGAACTGCCCTACCTGTGGTCAGGATTAATGCATGTGTAGTTAATG ATCACGGTTCAATTGTTTCTGAACACAAAAAACCTAGAGCTAAAGACAGATATCTTTCAAGGTCTTCTAGGATGCAAACTACAACTAGTGAGTCAAGGAT TTCACCTTCTGACACAGATTCTCAATCCAAAGCTGTTAGTGAACAAGATACCCATCACTCTTGGAAATCCACTGCATCCATTATCAGACCAAAAGACAAG ATTTGCTCAGTGGATGATCTACAATTGAAATTCGGGGACTGGTACTATCTTGATGGTGCTGGCCATGAGCGAGGACCATTCTCAATTTCAAAGCTTCAGT CCTTGGCTGATCAAGGGATCATACCGAAGCACAGCAGTGTGTACAGAAAGTATGATAGGGTGTGGGTTCCAGTTAGCTCTGCTGGCAGGATTCCTGAAGC TAATGCCAGAGGAAGGGCGAAGCATAGTGGACAAGCTGATAGTACAATGGATTTCATTGGCTATACCCGTGGGAAGTTGCACGAGTTAGTTATGAAATCA TTCAAGAGTAGGGAGTTTGCTGCTGCTATAAATGAGGTTTTAGATCCATGGATCAGTGCAAAGCAGCCTAAGAAAGAGATTGACAAACATATCAACTGGA ACACTGATATAGATATACCTGCTGGAAAAAGAGCGAGGATGCAGATAGATGGAAGTGATGAGGATAATTATGGTCAGGAAGACTTGCCCATTCCAAAGGA TAAAAGCACTTTTGAGGAGCTGTGTGGTGATGCAACTTTCAATTGGGATGCTGGAAGAAGTGCTTCTTCGGAGACAAATATAGGAGGCTGGGGTTTACTG GATGGACATATTTTGGCTCGAATGTTTCACTTGTTAAGATCTGACATAAAGTCTCTTGCCATTGCTTCTTTAACTTGTAAGCATTGGAGATCTGCTGTCA GTTTCTACAAGGGTATATCAAAACAGATTGATCTGTCGTCTCTTGGTCCCAACTGTACTGATATGGTGATCCGCAATTTTGTGAGTGGTTACCAGAAGGA AAAGGTGAATTCGTTGGTGCTGGCTGGCTGCACAAAGATAACTTGCAGCGGTCTTGAGGAAATTATTCGTGCCTTTCCATGTTTATCTTACATAGATATT AGAGGCTGTAGTCAACTCTCTGACTTGGCTCTTCAGTTTCCACATGTGAACTGGATCAAGAGTCGAAATCCATCTGGCTTGAAAACCTCTGAGGAGCTGT ACTCTAAAGTGAAGAGTTATAAACCGATCAGTGAGAAACCTTCATCATCATATAAAACTAGGGGCCTGGGTGGTGATGGTGATGATTTTGGAGAACTGAA GGAATATTTTGCCAGCGTGACTAAGAGAGATTCTGCCACACAATTGTTCCATCGTAGTTTATATAAACGCTCCAAAGTGTTTGATGCTAGAAGGTCATCA TCCATAGCATCAAGGGATGCACGTATGAGGCGATGGGGTATCAAGAAATCTGAAAGTTCCTATATGAGAATGGAAGGCTTTATTGCTGTGGGCTTGAAGG ACATCATGAAGGAGAATACCTTTGACTTCTTCATTCCCAAGGTAGCAGAAATTGAAGATCGCATGGATAATGGTTATTACATTGGACGTGGATTGAAGTC TGTTAAGGAGGATATTAGTCGAATGTGCAGGGATGCTATAAAGGCAAAGAATCGTGGTGCTGGGAATATGAATCGCATTATAACTCTGTTTCTTCAACTT GCCTCACGTTTGGAGGATAATTCTAAGCGAGAAGAACTCATGAAATCATGGAAACATGACTTGTCTGCTGGTTTGAGCTCGGGATACAACAAAAAGAAGC AGTTGCTCACTGAAAGAAAGTATGCTGGCAGGAATAATGGGACTCCTTCAGCAAATGACAGTCTCAACTATGGGGAATATGTATCTGATAGAGAAATCAA GAGACGGCTTTCCAAATTGAACAGAAAATCTATGGATTCTGGAAGTGAAACTTCTGACGATTTTGATAAGTCATCTGGTGACGGCAAGTATTACAGTGAG AGTACTTCGTCAGATGCTGAAAGTGACCTGGAGTTTCAGTCAGGAGGCCGAGATGGGAATATCAGAGCTGGATTTTTCATGGAAGAGGAGAGTTCCTATG CTGTTGTTGATGAGCGAGAGTGGGGTGCTCGCATGACAAAAGCTAGTTTGGTTCCTCCTGTGACCAGGAAATACGAAGTCATAGATAGGTATGTAACCGT CGCAGATGAGGATGATGTACAACGAAAGATGTGTGTCTCCTTGCCGGATGACTATGCCGAGAAGCTTGAAGCTCAGAAAAGTGGTAAGGAGGAGTTGGAC ATGGAGCTTCCTGAAGTGAAGGACTTTAAGCCTAGAAAACAGCTTGGAGATGAAGTTATCGAACAAGAAGTTTATGGGCTAGATCCCTATACTCATAATC TCATACTTGATTCCATGCCGGAGGAAATGGACCGGTCTCTGCAGGATAAGCATGTGTTTATTGAAGATGTGCTCCTCCAAACCCTTAATAAGCAAGTCAG GCACTTCACTGGTGCTGGGAACACTCCCATGATTTACCCTTTGAAGCCTGTTATTGAAGAGATTATGAAGTCCGCTGACGAAGACTGCAACATGCGAACA ATGAGAATGTGTCGGTGCATCATGAAGGCCATAGATAGTCGTCCTGACGACAAATATGTTGCTTACAGAAAGGGGCTGGGTGTCGTTTGCAACAAAGATG GTGGCTTCGGAGAAGAGGACTTTGTTGTTGAATTCTTGGGAGAGGTTTATCCTGCTTGGAAATGGTTCGAAAAGCAAGATGGCATTCGGAATTTGCAGAA AGACAGTAAAGATCCGGCTCCAGAATTTTACAACATCTATCTTGAGAGGCCAAAGGGTGATGCAGATGGGTATGATCTGGTGGTTGTCGATGCCATGCAT AAAGCGAACTATGCTAGTCGGATATGTCATTCTTGCAGACCCAACTGTGAAGCAAAAGTCACAGCTGTAGATGGCAAGTATCAGATTGGTATTTACACGG TTCGTGAAATCCAAAATGGCGAGGAAATCACATTTGACTACAATTCCGTGACAGAAAGTAAAGAAGAGTATGAAGCATCAGTTTGTCTGTGTGGAAGTCA AGTTTGCCGTGGGAGCTACTTAAATCTGACAGGCGAAGGGGCTTTCCAGAAGGTGCTGAAACAGTGGCATGGAGTATTGGATAGACATCAATTGATGCTG GAAGCTTGTGAAGCGAATTTTGTATCCGAGGAAGATTATCTCGACTTGGGGAGGGCTGGTTTGGGTAGCTGTCTGCTTGGTGGATTGCCGGACTGGGTGG TTGCATATTCAGCTCGTCTGGTGAGATTCATAAACCTTGAGAGGACAAAGCTGCCTGAAGAAATCCTAAAGCATAACCTGGAAGAGAAAAAGAAATACTC TTCAGAAATCTGCCTGGATGTTGAGAGAAGTGATGCTGAAGTTCAGGCCGAAGGTGTTTATAACCAGAGGCTTCAGAATTTGGCGGTCACTCTGGACAAG GTGAGGTATGTAATGAGATGCATATTTGGTGACCCAAAGAAAGCTCCGCCACCATTAGAGAGGCTTTCTCCAGAAGAAACTGTTTCTGTCTTATGGAAAG GAGAGGGATCACTTGTCGAGGAACTACTTCAGTGCATGGCTTCCCATATGGATTCCGACAATCTAAATGATCTCAAGATCAAGATTCGAGCGCACGATCC AACGGATTCCACTAATGTGCAGAAAGAGCTTCATAAAGCATTGTTATGGTTGAGAGACGAGGTTCGGAATCTTCCATGTACATATAGGTGTCGGCATGAT GCTGCGGCCGACTTGATTCACATTTATGCTTATACGAAGTGCTTTTTCAGAATTCGGGAATACGCTGCATTTACGTCTCCTCCAGTGCACATTAGTCCGC TCGACTTGGGTCCTGAGTGTGCTGCAAAGTTGGGCGATGGCATCCACGAGTATCGTAAGGTCTATGGCGAGAACTACTGTATAGGACAGCTGATTTTTTG GCACGTACAGACGAATACGGACCCTGATGCTACCCTTGCTAAAGCAACCAAGGGTTGTTTGTCTTTACCCGACGTAGCTTCCTTCTACGCCAAGCCCCAG AAGCTAAAACAGCAACGCGTCTACGGCCCCAAGAATCTCAAATTAATGCTCGAACGGATGGACAAGTACACGCAGAAGCCATGGCCAAGGGACCAGATAT GGTCGTTTGAGAGCAGCCCGAAAGCATTCGGGAGCCCGATGTTCGATGCCATTGTAAACAACACGCATCTAGACAGGGAGATGCTGCATTGGCTGAAGCA TAGACCGACGGTCTTCCAGGCAATGTGGGATAGGTGA
AA sequence Show only first row Show all	>Lus10039707 pacid=23165311 polypeptide=Lus10039707 locus=Lus10039707.g ID=Lus10039707.BGIv1.0 annot-version=v1.0 MTPTGTIDEKKDVVAASAAAATATTLTTVSNGKTTTTKPKKILRKIITVKKVIRRVPVSELRKKKEAESLKAAAAAAETTKSTGGVDGKSDLVTPGKEGE NVDSKVQNGKEEVEEGELGTLKWPPSRVEVEKGEFVVPQRRSEIEKEEIAGDKWMRRGEVDKGQHQNVSGKWRQWEFSRDEVEKGEFIPNRWHQGKEEYS YSKSRGKYDSSSSKDRTPPSGRYQAEESYVRKDGCRGGNSQQHAKGSLRWENGQERGGIRISSKIVDDEGSYKSGEYINGKNNHVREHSTSANRLKRHGT DSDNNDRKHHADYGDYAGSKSRRLSDDSSRSSNSDHHSRHSAERYVRTPSSANKYSARYHEPTLSSKVVFERQQPERSPRNRSRYDHNRERSPTHRDQSP HGKERVSHGRDRSSYGREKSPHGRERSPHAREKSPFVRERSQNLREKSPHERSRHHERRSRTPSYTERSPQDRSRNHERRDQTPNRLEKSPLGRGKLNTP KETSRKSGGSDKRNSGDKGQEDRLGQRDANVRDTQFTAKEDEERSSTLISDGLGLKNADCETRKAEKLECPKIDSKDSPLAEAPFLEELQSMEEDMDICD TPPHAPVVADSSTGKWFYLDYFGVERGPAKLSDLKGLVDEGVLVSDHLIKHLDSDRWMTVEKAVSPKETANSTSIVSESITQLVSPPEAPGNVLTDGGDG LSVSRDGEEVPINLAEPQKCPDVYSSDLHIDERVKNLVDGVSLIPGRELETIGEILHTTFSQVQWDEWAKGYSQHETSPHNQRDDTSQALETKLIEAVEM RSSFIHEKDNGFESSADPADWFSGRWSCKGGDWIRNDEGVDRFSRRKMVLNDGFPLCLMPRSDLEDPRWQRKEDLYYPSHSRKLELPPWAFSSQDEKNGS AGANRSNPAKPHVVRGVPGTALPVVRINACVVNDHGSIVSEHKKPRAKDRYLSRSSRMQTTTSESRISPSDTDSQSKAVSEQDTHHSWKSTASIIRPKDK ICSVDDLQLKFGDWYYLDGAGHERGPFSISKLQSLADQGIIPKHSSVYRKYDRVWVPVSSAGRIPEANARGRAKHSGQADSTMDFIGYTRGKLHELVMKS FKSREFAAAINEVLDPWISAKQPKKEIDKHINWNTDIDIPAGKRARMQIDGSDEDNYGQEDLPIPKDKSTFEELCGDATFNWDAGRSASSETNIGGWGLL DGHILARMFHLLRSDIKSLAIASLTCKHWRSAVSFYKGISKQIDLSSLGPNCTDMVIRNFVSGYQKEKVNSLVLAGCTKITCSGLEEIIRAFPCLSYIDI RGCSQLSDLALQFPHVNWIKSRNPSGLKTSEELYSKVKSYKPISEKPSSSYKTRGLGGDGDDFGELKEYFASVTKRDSATQLFHRSLYKRSKVFDARRSS SIASRDARMRRWGIKKSESSYMRMEGFIAVGLKDIMKENTFDFFIPKVAEIEDRMDNGYYIGRGLKSVKEDISRMCRDAIKAKNRGAGNMNRIITLFLQL ASRLEDNSKREELMKSWKHDLSAGLSSGYNKKKQLLTERKYAGRNNGTPSANDSLNYGEYVSDREIKRRLSKLNRKSMDSGSETSDDFDKSSGDGKYYSE STSSDAESDLEFQSGGRDGNIRAGFFMEEESSYAVVDEREWGARMTKASLVPPVTRKYEVIDRYVTVADEDDVQRKMCVSLPDDYAEKLEAQKSGKEELD MELPEVKDFKPRKQLGDEVIEQEVYGLDPYTHNLILDSMPEEMDRSLQDKHVFIEDVLLQTLNKQVRHFTGAGNTPMIYPLKPVIEEIMKSADEDCNMRT MRMCRCIMKAIDSRPDDKYVAYRKGLGVVCNKDGGFGEEDFVVEFLGEVYPAWKWFEKQDGIRNLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMH KANYASRICHSCRPNCEAKVTAVDGKYQIGIYTVREIQNGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKQWHGVLDRHQLML EACEANFVSEEDYLDLGRAGLGSCLLGGLPDWVVAYSARLVRFINLERTKLPEEILKHNLEEKKKYSSEICLDVERSDAEVQAEGVYNQRLQNLAVTLDK VRYVMRCIFGDPKKAPPPLERLSPEETVSVLWKGEGSLVEELLQCMASHMDSDNLNDLKIKIRAHDPTDSTNVQKELHKALLWLRDEVRNLPCTYRCRHD AAADLIHIYAYTKCFFRIREYAAFTSPPVHISPLDLGPECAAKLGDGIHEYRKVYGENYCIGQLIFWHVQTNTDPDATLAKATKGCLSLPDVASFYAKPQ KLKQQRVYGPKNLKLMLERMDKYTQKPWPRDQIWSFESSPKAFGSPMFDAIVNNTHLDREMLHWLKHRPTVFQAMWDR

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G15180		SDG2, ATXR3	SET domain protein 2 (.1)		Lus10039707 [exp]	0	1
AT4G15180		SDG2, ATXR3	SET domain protein 2 (.1)		Lus10018496 [exp]	1.0	0.9891
AT4G17330		ATG2484-1	G2484-1 protein (.1)		Lus10007793 [exp]	5.7	0.9532
AT4G02560	HD	LD	luminidependens, Homeodomain-l...		Lus10009816 [exp]	6.3	0.9505
AT1G24706		EMB2793, AtTHO2	EMBRYO DEFECTIVE 2793, THO2 (....		Lus10031945 [exp]	6.9	0.9539
AT3G58560			DNAse I-like superfamily prote...		Lus10016206 [exp]	7.5	0.9353
AT3G12810		CHR13, SRCAP, P...	PHOTOPERIOD-INDEPENDENT EARLY ...		Lus10002974 [exp]	8.1	0.9535
AT5G23150		HUA2	ENHANCER OF AG-4 2, Tudor/PWWP...		Lus10040980 [exp]	8.5	0.9454
AT5G47690			binding (.1.2.3)		Lus10038777 [exp]	8.9	0.9478
AT1G70060		SNL4	SIN3-like 4 (.1)		Lus10010729 [exp]	9.0	0.9494
AT3G21430	MYB	ATALY3	ARABIDOPSIS THALIANA ALWAYS EA...		Lus10033961 [exp]	9.3	0.9345

Compare expression of checked genes

Lus10039707 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.