Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G17430 510 / 2e-178 O-fucosyltransferase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10004385 [exp] 909 / 0 AT4G17430 503 / 8e-174 O-fucosyltransferase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G079400 [exp] 605 / 0 AT4G17430 585 / 0.0 O-fucosyltransferase family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10040182 pacid=23174156 polypeptide=Lus10040182 locus=Lus10040182.g ID=Lus10040182.BGIv1.0 annot-version=v1.0 ATGAACACGATACTCAATCTCCACAAAGAAACAACAAAATCATGGAGAAAACGTAAATCCATGAACCCATCTCCTTCCTTCATCCTCGCAATTTCTTTCG TCACACTCTCTATTCTCTTCTTCTTCTTCTACCATTTCTCATTCCACACCTCTGAATCTCTCTTCGTTTCCCAAACCCTAAATTCTCAAAATCCGAAATG CGGAAATATCCGAACTTCAATCGAGGGAGAGAAGTTCCTGTGGTACGCGCCCCACAGTGGATTCAGCAACCAGCAGTCAGAGCTGAAGAACGCGGTACTG ATGGCGGGGATTCTGAACAGAACTTTGGTTGTGCCTCCGGTTCTTGATCACCATGCCGTTGTTCTCGGGAGCTGCCCCAAGTTTCGGGTTACGGAGCCTA ACGAGATCAGAGCTTCTGTTTGGAATCACGCCATCGAACTGATGGAGAGCGGGAGGTATGTATCAATGGCAACCATCATTGATATGTCCTCGCTGGTATC TGGATCACTTCGTACGATCGATTTCAGGGAGTTTGCGTCGATATTTTGTGGTGTAAATATGGATTTGACTTGTGTTGATAGGAACGCCGTTGCCTCTTCT CCATTTGATAGCCTTAGGGAGTGTGGAGATGTGCTATCTGGGCGTAATGGTAACATAGATGGGTGTCTGTATGCAGTAAATGAGGACTGCAGAACCACAG TCTGGACTTACGAGGATGGCGTCGATGGATCTTTAGATTCATTTCAAGCTGATGAGCTTCTCAGAAAGAGAAAGAGGATATCGTATGTGAGGAAGCGTCG AGATGTGTATAAGAACCTTGGACCGGGTTCTAAAGCTGACTCAGCCATTGTCCTGGCATTTGGATCTCTTTTCTCTGCTCCCTACAAAGGCTCGGAGTCT CATGTCGATATTCGCAAAGTAAAGAGCAGCTCGAGAGTAGCTTCTTTGATTGAGAAGAGCGAACTCTTACCCTTTGTCCCTGAAATCTTAAATGCAGGGA AGAAGTTTGCGTTGGAGACGATAAAAGATCCCTTTGTTTGCGCACAGCTCAGGTTGTTAGATGGGCAGTTTAAAAACCACTGGAAGGCGACCTTCCAGGG TCTAAGACAAATGCTTGAATCTTTGAAGCAGCAAGGCACTCACCCGGTTAGCATGTTTGTAATGACCGATCTTCCTCGGGCTAACTGGAGCAGAACTTAT CTGGGGGAGTTAGCTAGTGATGAGAAGCACTATAAGTTGTATTCTCTTGCGAGAAAAGATGGTATAGTTGTTGAAACAGCAAGACAACTTGCAGAGAAAG CAAGCAAAGATCAGCATTTTTGCCCTAACCAGACACTTCCGGACATTCTCTTAGACGTTGAAGAGAGTGTGTGCAGTTGTGCATCACTTGGTTTTGTCGG GACTGCTGGATCAACTATTGCTGAGAGCATACAGTTGATGAGGAAGTCAGATATCTGTTCCGTGCTGAATCGGACTGCAAGATAA
AA sequence Show only first row Show all	>Lus10040182 pacid=23174156 polypeptide=Lus10040182 locus=Lus10040182.g ID=Lus10040182.BGIv1.0 annot-version=v1.0 MNTILNLHKETTKSWRKRKSMNPSPSFILAISFVTLSILFFFFYHFSFHTSESLFVSQTLNSQNPKCGNIRTSIEGEKFLWYAPHSGFSNQQSELKNAVL MAGILNRTLVVPPVLDHHAVVLGSCPKFRVTEPNEIRASVWNHAIELMESGRYVSMATIIDMSSLVSGSLRTIDFREFASIFCGVNMDLTCVDRNAVASS PFDSLRECGDVLSGRNGNIDGCLYAVNEDCRTTVWTYEDGVDGSLDSFQADELLRKRKRISYVRKRRDVYKNLGPGSKADSAIVLAFGSLFSAPYKGSES HVDIRKVKSSSRVASLIEKSELLPFVPEILNAGKKFALETIKDPFVCAQLRLLDGQFKNHWKATFQGLRQMLESLKQQGTHPVSMFVMTDLPRANWSRTY LGELASDEKHYKLYSLARKDGIVVETARQLAEKASKDQHFCPNQTLPDILLDVEESVCSCASLGFVGTAGSTIAESIQLMRKSDICSVLNRTAR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G17430			O-fucosyltransferase family pr...		Lus10040182 [exp]	0	1
AT4G17430			O-fucosyltransferase family pr...		Lus10004385 [exp]	4.7	0.7654
AT3G54350	FHA	EMB1967	embryo defective 1967, Forkhea...		Lus10041808 [exp]	26.5	0.7297
AT3G14460			LRR and NB-ARC domains-contain...		Lus10002737 [exp]	222.9	0.6128
AT1G52260		ATPDI3, ATPDIL1...	ARABIDOPSIS THALIANA PROTEIN D...		Lus10035870 [exp]	244.4	0.6207
AT3G12010			unknown protein		Lus10021085 [exp]	251.5	0.6174

Compare expression of checked genes

Lus10040182 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.