Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G39200 680 / 0 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 664 / 0 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT1G61560 655 / 0 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G33670 426 / 1e-143 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT2G17480 400 / 3e-132 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT1G42560 393 / 2e-131 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT5G65970 395 / 9e-131 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT3G45290 391 / 6e-130 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G17430 389 / 6e-129 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT2G44110 358 / 2e-117 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023506 [exp] 995 / 0 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10041410 [exp] 833 / 0 AT1G61560 769 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036519 [exp] 825 / 0 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036120 [exp] 481 / 2e-164 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10036121 [exp] 441 / 1e-148 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10019630 [exp] 436 / 3e-146 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 412 / 2e-138 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 412 / 7e-137 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 363 / 1e-118 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G041400 [exp] 712 / 0 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.010G220500 [exp] 707 / 0 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.009G011900 [exp] 648 / 0 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 548 / 0 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 495 / 8e-170 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.002G007000 [exp] 450 / 3e-152 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.006G129700 [exp] 447 / 2e-151 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.004G050000 [exp] 442 / 7e-151 AT2G39200 490 / 4e-170 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.005G254300 [exp] 443 / 9e-150 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.005G099200 [exp] 432 / 3e-145 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10040388 pacid=23173875 polypeptide=Lus10040388 locus=Lus10040388.g ID=Lus10040388.BGIv1.0 annot-version=v1.0 ATGGCGGGAGGCGGCGACTATGAACGGACTTTGGAGGAGACTCCGACGTGGGCCGTCGCCGCCGTCTGCTTTGTGCTGGTCGTCATTTCCATCTTCATTG AACATCTCATCCATCTCGCCCATAAGTCGTTGCATAAGCTGCACAAGCCAGCTCTTGTGGAAGCGTTGGAGAAAGTGAAAGCTGAGCTAATGCTCTTAGG ATTCATATCGTTGCTTCTCACAGTATTCCAAGACCCGATCTCAGGAATCTGCATCTCGAAAAGCGCTGGAGCGACTTGGCATCCTTGTACTTCGAAGCAG GAGAAAGAAGCAGAGCATGAGGAAGAAGACGGAGAGGAAAGCCATCGCCGGCGGCGGCTGCTTTTGGAGTTCTTGGGACCTGTCCGGCGTAGCTTGGCAT CGAAAGGCGGCGATAAATGCGCAGACAAGGGAAAAGTTGCGTTTGTTTCAGCGTATGGTATCCACCAGCTGCATATATTCATCTTTGTGTTGGCTGTTTT CCACATCATTTACTGCATCATCACCTATATTCTTGGCAGAACCAAGATGAGGAAGTGGAGAGCATGGGAGGATGAGACCAAGACGCTTCAGTATCAGTAT CATAATGATCCTGAGAGGTTTAGGTTTGCAAGAGATACATCTTTCGGGAGGCGACATATGAACATATGGAGCAAGACTACGATTTCTCTTTGGATTGGAT GCTTCTTTAGGCAGTTTTATGGATCAGTTACCAAGGTCGATTACATGACCTTGAGACATGGATTCATCACGGCACATTTGGCTCCTGGAAGTGAGAACAG ATTTGACTTCCAGAAATACGTCAACAGATCACTTGAGGATGACTTCAAAGAAGTTGTAGGGATCAGTCCAGTTTTGTGGTTCGTTGCAGTAATGCTCCTG CTATCTAACACACATGGATGGTTTGCTTATCTGTGGCTACCCTTTATTCCATTAATTATAATCCTGGTGGTTGGTACGAAGCTGCAAGTGATCATAGCCC AGCTGGGTCTGAGGATTCAGGACAGAGGGGATGTGGTTAAAGGAGCTCCGGTGGTTCAGCCGGGAGATGATCTCTTCTGGTTCAGTCGACCTCGTCTCGT TCTCTTCCTCATCCATTTCTGCCTCTTTCAGAACGCTTTCCAGCTCGCTTTCTTCATCTGGAGCGTGTACGAATTTGGAATCAGTACTTGCTTCCACGAG AAAACTGAGGACATTGTCCTCCGAGTTGTAATGGGGGTGATAATCCAAGTGCTGTGCAGTTATGTGACACTGCCACTACACGCATTAGTAACTCAAATGG GATCAAACATGAGGCCAACAATATTCAACGACAGAGTAGCCACAGCGCTCAAGAACTGGCACCGGACGGCCAAGAGACACACCAGGCACGGCGGAGGCGC AAAGTCAGGATCCCACACTCCGACTTCCAGCCGGCCAGGGACGCCAAGCCGCGGCATGTCCCCTGTTCACCTCCTCCACAATTACCGGGACAGCACCGGC CCTGACAGCGTAATGAGTTCTCCGGCCAGGAATTCCTACGACCGGTGGGATCCCGAGTCTCTTATCTCGCCTGTTCACCACCCCCACCACCACCGCTACT ACGGAAGCAGCCACGGTGGAAGCAACGGTGGATACCGGGAGGCGGATGAGTTCCAACAGAATGTCGGTAGCTTGGGGCAGCAGATGGAGGTTGAAGACGT TGTGGTGGCGGTGAGGAATCAAGAGGCCAGAGTACCGGCAGCCACGAGGCTTCCGCCGGGGCTGGAGTCTGTGAGGAGGCAGCAGGAGAGAAACGTTGGT TTGGCGGATTTTACGTTCAGGAAAGGATGA
AA sequence Show only first row Show all	>Lus10040388 pacid=23173875 polypeptide=Lus10040388 locus=Lus10040388.g ID=Lus10040388.BGIv1.0 annot-version=v1.0 MAGGGDYERTLEETPTWAVAAVCFVLVVISIFIEHLIHLAHKSLHKLHKPALVEALEKVKAELMLLGFISLLLTVFQDPISGICISKSAGATWHPCTSKQ EKEAEHEEEDGEESHRRRRLLLEFLGPVRRSLASKGGDKCADKGKVAFVSAYGIHQLHIFIFVLAVFHIIYCIITYILGRTKMRKWRAWEDETKTLQYQY HNDPERFRFARDTSFGRRHMNIWSKTTISLWIGCFFRQFYGSVTKVDYMTLRHGFITAHLAPGSENRFDFQKYVNRSLEDDFKEVVGISPVLWFVAVMLL LSNTHGWFAYLWLPFIPLIIILVVGTKLQVIIAQLGLRIQDRGDVVKGAPVVQPGDDLFWFSRPRLVLFLIHFCLFQNAFQLAFFIWSVYEFGISTCFHE KTEDIVLRVVMGVIIQVLCSYVTLPLHALVTQMGSNMRPTIFNDRVATALKNWHRTAKRHTRHGGGAKSGSHTPTSSRPGTPSRGMSPVHLLHNYRDSTG PDSVMSSPARNSYDRWDPESLISPVHHPHHHRYYGSSHGGSNGGYREADEFQQNVGSLGQQMEVEDVVVAVRNQEARVPAATRLPPGLESVRRQQERNVG LADFTFRKG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G39200		ATMLO12, MLO12	MILDEW RESISTANCE LOCUS O 12, ...		Lus10040388 [exp]	0	1
AT1G01490			Heavy metal transport/detoxifi...		Lus10014967 [exp]	2.0	0.9227
AT5G54510		DFL1, GH3.6	DWARF IN LIGHT 1, Auxin-respon...		Lus10018510 [exp]	3.0	0.9185
					Lus10005397 [exp]	3.5	0.9287
AT5G10750			Protein of unknown function (D...		Lus10026242 [exp]	9.2	0.9147
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10042611 [exp]	11.0	0.9027
AT5G05340			Peroxidase superfamily protein...		Lus10000625 [exp]	12.0	0.8377
					Lus10005395 [exp]	12.7	0.9128
AT1G17020		ATSRG1, SRG1	senescence-related gene 1 (.1)		Lus10015252 [exp]	14.5	0.8987
AT1G44970			Peroxidase superfamily protein...		Lus10033193 [exp]	16.1	0.8145
AT1G11380			PLAC8 family protein (.1)		Lus10002586 [exp]	16.5	0.9179

Compare expression of checked genes

Lus10040388 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.