Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G68090 288 / 7e-97 ANN5, ANNAT5 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) AT5G65020 185 / 1e-56 ANNAT2 annexin 2 (.1.2) AT5G10220 178 / 6e-54 ANN6, ANNAT6 ANNEXIN ARABIDOPSIS THALIANA 6, annexin 6 (.1) AT5G10230 176 / 2e-53 ANN7, ANNAT7 annexin 7 (.1) AT5G12380 171 / 3e-51 ANNAT8 annexin 8 (.1) AT1G35720 155 / 5e-45 ATOXY5, ANNAT1 annexin 1 (.1) AT2G38760 151 / 1e-43 ANN3, ANNAT3 annexin 3 (.1) AT2G38750 84 / 2e-18 ANNAT4 annexin 4 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023530 [exp] 547 / 0 AT1G68090 350 / 4e-121 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Lus10009225 [exp] 464 / 2e-166 AT1G68090 358 / 3e-124 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Lus10037992 [exp] 418 / 2e-148 AT1G68090 321 / 6e-110 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Lus10031942 [exp] 260 / 5e-86 AT1G68090 353 / 2e-122 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Lus10035101 [exp] 255 / 3e-84 AT1G68090 352 / 1e-121 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Lus10024054 [exp] 165 / 7e-49 AT5G65020 400 / 6e-141 annexin 2 (.1.2) Lus10008227 [exp] 163 / 3e-48 AT1G35720 476 / 9e-171 annexin 1 (.1) Lus10003611 [exp] 163 / 4e-48 AT1G35720 476 / 1e-170 annexin 1 (.1) Lus10019780 [exp] 160 / 4e-47 AT5G12380 372 / 1e-129 annexin 8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G041900 [exp] 406 / 1e-143 AT1G68090 358 / 3e-124 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.015G031800 [exp] 405 / 4e-143 AT1G68090 356 / 3e-123 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.008G139500 [exp] 270 / 6e-90 AT1G68090 363 / 4e-126 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.010G101800 [exp] 246 / 6e-80 AT1G68090 343 / 3e-117 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1) Potri.001G024800 [exp] 174 / 3e-52 AT2G38760 395 / 1e-138 annexin 3 (.1) Potri.007G092500 [exp] 172 / 1e-51 AT5G65020 488 / 2e-175 annexin 2 (.1.2) Potri.005G075900 [exp] 164 / 1e-48 AT5G65020 472 / 3e-169 annexin 2 (.1.2) Potri.002G095600 [exp] 163 / 2e-48 AT1G35720 481 / 1e-172 annexin 1 (.1) Potri.003G200700 [exp] 159 / 6e-47 AT5G12380 399 / 3e-140 annexin 8 (.1) Potri.015G107600 [exp] 138 / 2e-41 AT1G68090 89 / 9e-23 ANNEXIN ARABIDOPSIS THALIANA 5, annexin 5 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00191 [flax] [poplar] Annexin Annexin
Representative CDS sequence Show only first row Show all	>Lus10040415 pacid=23173900 polypeptide=Lus10040415 locus=Lus10040415.g ID=Lus10040415.BGIv1.0 annot-version=v1.0 ATGTCAACTCTGAATTTCCCGCCGGTGCTTCCTTCTCCCAGAGACGACGCCATTCTTCTCCACAAGGCTTTCAAGGGATTCGGATGCGACAACTCAGCAG TTGTAGATATTCTGGCTCATCGAGATGCAGCACACCGTGCTTATATCCAATATGAGTATAGGACAATGTTCTCCGAGGACATCTTCAAGCGATTGTCTTC CGAGCTGAGTGGCAAGCTCGAGAATGCAGTTATGATGTGGATGCAAGATCCTCCAGGATGTGATGCTGCGATTGTCAGGCAAGGGTTGATGTCCGAATCG ACTAATTTGGATGCTGTAACCGAAGTAATCTGTTCCCGAACTCCGTCCCAGATACAGATGTTGCTTGCATATGCGAGCACTCCACGTTACGAAGGATGGG AAGTTGACAAAGCGGCGGCCGAGAACGATGCAAGAACTCTATACAAAGCAGGGGAGAAGAGGCTGGGAACTGATGAGAAGACGTTCATCAACGTTTTTAG CTCGCGAAGCTCGGCTCATTTGGCTGCTGTCGATGCTGCTTACGACAATTTGTACGGACACTCCTTGAAGAAGGCTGTGAAGAAGGAGACATCAGGATAT TTCAAGCAAGCACTTTTGACAGTCTTGCTATGTTCTGAGAATCCTGCAAAGTACTTCGCAAAGGTGCTGCACAAGGCGATGAAAGGTCTAGGCACGAACG ATGCAGCACTTATACGGGTAATCGTGACGAGGACTGAGATCGACATGCAATACATAAAAGCTGAGTACGTGAAGAAGTACAAGAAGAAGTTGAACGATGC GGTTCATTCGGAAACATCGGGGAGTTACAGGAAGTTCCTGATTGCCCTTCTGGGACCTGCTATTTGA
AA sequence Show only first row Show all	>Lus10040415 pacid=23173900 polypeptide=Lus10040415 locus=Lus10040415.g ID=Lus10040415.BGIv1.0 annot-version=v1.0 MSTLNFPPVLPSPRDDAILLHKAFKGFGCDNSAVVDILAHRDAAHRAYIQYEYRTMFSEDIFKRLSSELSGKLENAVMMWMQDPPGCDAAIVRQGLMSES TNLDAVTEVICSRTPSQIQMLLAYASTPRYEGWEVDKAAAENDARTLYKAGEKRLGTDEKTFINVFSSRSSAHLAAVDAAYDNLYGHSLKKAVKKETSGY FKQALLTVLLCSENPAKYFAKVLHKAMKGLGTNDAALIRVIVTRTEIDMQYIKAEYVKKYKKKLNDAVHSETSGSYRKFLIALLGPAI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G68090		ANN5, ANNAT5	ANNEXIN ARABIDOPSIS THALIANA 5...		Lus10040415 [exp]	0	1
AT3G04890			Uncharacterized conserved prot...		Lus10015938 [exp]	1.0	0.9104
AT4G27610			unknown protein		Lus10043458 [exp]	2.8	0.8949
AT1G75210			HAD-superfamily hydrolase, sub...		Lus10032712 [exp]	4.9	0.8890
AT5G50400		ATPAP27, PAP27	ARABIDOPSIS THALIANA PURPLE AC...		Lus10037080 [exp]	7.3	0.8453
AT2G24220		ATPUP5	purine permease 5 (.1.2)		Lus10022148 [exp]	8.1	0.8551
AT1G29380			Carbohydrate-binding X8 domain...		Lus10015259 [exp]	8.2	0.8974
AT2G41200			unknown protein		Lus10032687 [exp]	12.2	0.8730
AT2G45080		CYCP3;1	cyclin p3;1 (.1)		Lus10028174 [exp]	13.1	0.8679
AT2G18196			Heavy metal transport/detoxifi...		Lus10008284 [exp]	13.2	0.8959
AT3G13130			unknown protein		Lus10006387 [exp]	13.5	0.8593

Compare expression of checked genes

Lus10040415 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.