Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G39020 310 / 1e-107 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT2G39030 283 / 2e-97 NATA1 N-acetyltransferase activity 1, Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023533 [exp] 432 / 8e-155 AT2G39020 315 / 8e-109 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G037700 [exp] 330 / 8e-116 AT2G39020 301 / 2e-104 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.010G224800 [exp] 326 / 4e-114 AT2G39020 303 / 7e-105 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G037600 [exp] 288 / 3e-99 AT2G39020 273 / 6e-93 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [flax] [poplar] Acetyltrans PF00583 [flax] [poplar] Acetyltransf_1 Acetyltransferase (GNAT) family
Representative CDS sequence Show only first row Show all	>Lus10040418 pacid=23174209 polypeptide=Lus10040418 locus=Lus10040418.g ID=Lus10040418.BGIv1.0 annot-version=v1.0 ATGGCCGCCGCAGCACCGCCGCCGCCACCGTCCCCGACTCCCAACCCACCAACGGGCTTACCGAACTCCGAAAGCAACACCCCAGTCGGCTACCCACTCT TCTCCCGCATCCGCCTCGCCACCCCAACCGACGTCCCCCACATCCACAAGATGATCCACCAAATGGCCGTCTTCGAGAAGCTCACCCATCTCTTCTCCGC CACCGAATCAAACCTCTCCTCCTCCCTCTTCACCTCCCCTCCTTTCCAATCCTTCACTGTCTTCCTCTTAGAAATATCCCGCTCCCCTTTCCCCAACGCC CCGACTCCTTCCTCTGCTTCCACCACCCACCGCATCGTCAACCTCGACCTCCCCGTCATCGACCTGGAGGCGGAGACGTTCAAGACCGGCGATGATGTTG TGATTGCTGGATTCGTGTTGTTCTTCCCCAATTACTCCAGCTTCTTGGCGAAGCCCGGGTTTTATATTGAAGATCTGTTCGTGAGGGAGTGTTACAGGAG GAAAGGGTTTGGAAAGATGCTGCTTTCGGCTGTGGCGAATCAGGCTGTGAAGATGGGGTATGGGAGGGTTGAGTGGGTTGTGCTTGATTGGAATGTGAAT GCCATCAATTTTTATGAAGGGATGGGTGCGAAAGTGTTGCCTGAGTGGCGCATTTGTAGGCTGACTGGCTCTGAACTTGAAGCCTATGGCGATTCTGCTG CTCTGTAG
AA sequence Show only first row Show all	>Lus10040418 pacid=23174209 polypeptide=Lus10040418 locus=Lus10040418.g ID=Lus10040418.BGIv1.0 annot-version=v1.0 MAAAAPPPPPSPTPNPPTGLPNSESNTPVGYPLFSRIRLATPTDVPHIHKMIHQMAVFEKLTHLFSATESNLSSSLFTSPPFQSFTVFLLEISRSPFPNA PTPSSASTTHRIVNLDLPVIDLEAETFKTGDDVVIAGFVLFFPNYSSFLAKPGFYIEDLFVRECYRRKGFGKMLLSAVANQAVKMGYGRVEWVVLDWNVN AINFYEGMGAKVLPEWRICRLTGSELEAYGDSAAL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G39020			Acyl-CoA N-acyltransferases (N...		Lus10040418 [exp]	0	1
AT1G02816			Protein of unknown function, D...		Lus10010297 [exp]	1.4	0.9441
AT2G39020			Acyl-CoA N-acyltransferases (N...		Lus10023533 [exp]	1.7	0.9424
AT4G29870			Oligosaccharyltransferase comp...		Lus10035623 [exp]	1.7	0.9478
AT5G42130		AtMfl1	MitoFerrinLike1, Mitochondrial...		Lus10029770 [exp]	2.8	0.9318
AT1G54990		RGR1, AXR4	REDUCED ROOT GRAVITROPISM 1, R...		Lus10029924 [exp]	3.2	0.9305
AT4G36020		CSDP1	cold shock domain protein 1 (....		Lus10041902 [exp]	4.0	0.9187
AT1G19480			DNA glycosylase superfamily pr...		Lus10010824 [exp]	4.2	0.9284
AT2G17870		ATCSP3	ARABIDOPSIS COLD SHOCK DOMAIN ...		Lus10005066 [exp]	4.7	0.9127
AT5G17630			Nucleotide/sugar transporter f...		Lus10019209 [exp]	6.0	0.8999
AT5G09590		HSC70-5, mtHSC7...	HEAT SHOCK COGNATE, mitochondr...		Lus10009677 [exp]	7.1	0.9131

Compare expression of checked genes

Lus10040418 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.