Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G66550 268 / 3e-92 Maf-like protein (.1) AT5G42770 239 / 1e-80 Maf-like protein (.1.2) AT2G25500 108 / 4e-31 Inosine triphosphate pyrophosphatase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10002531 [exp] 241 / 3e-81 AT5G42770 307 / 8e-107 Maf-like protein (.1.2) Lus10040204 [exp] 203 / 8e-68 AT5G66550 154 / 2e-48 Maf-like protein (.1) Lus10036572 [exp] 103 / 1e-28 AT5G66550 72 / 9e-17 Maf-like protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G025000 [exp] 272 / 8e-94 AT5G66550 278 / 1e-95 Maf-like protein (.1) Potri.014G196400 [exp] 250 / 5e-85 AT5G42770 309 / 2e-107 Maf-like protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0269 [flax] [poplar] Maf PF02545 [flax] [poplar] Maf Maf-like protein
Representative CDS sequence Show only first row Show all	>Lus10040470 pacid=23173956 polypeptide=Lus10040470 locus=Lus10040470.g ID=Lus10040470.BGIv1.0 annot-version=v1.0 ATGGCTCGGAGGAGGATTCTAACTGATATGGGCTATGAATTCACTTTGATGAGTGCAGATATTGATGAGAAAAGTATAAGGAAGGATAAGCCAGAGGAAT TGGTGATGGCTCTTGCTGAGGCTAAGGCAGATGCCATCGTAGCAAAGATGCTGAACACAGACCAAATGAAGAACTATAGTGATCCTACATTGTTGATTAC TGCAGATACGGTTGTGGTATACAAAGGAGTGGTGAGAGAGAAGCCAACCAGCGAGGAAGAAGCGCGGGAATTCATCAAAGGTTATTCCGGTGGTCATGCA GCTGTTGTAGGGTCCGTACTTGTAACCAATCTCGCTACAGGATCGAGAAGAGGAGGTTGGGAGAGCGCGGAGGTTTATTTCCATGAGATACCGAACGAAG TCATTGAAAGCCTGATCGAGGAGAGAATCACTTTCAAGGTGGCAGGAGGTCTTACGCTCGAACATCCTTTAACGATGCCCTTTGTCGAAGCTGTGGTGGG AAGTACTGATACTGTCAGCGGTCTTCCAACCGAGCTCACAAAACAACTTATTTCAGAAGTGTTGCAGCCTGTGAAGTCCTAA
AA sequence Show only first row Show all	>Lus10040470 pacid=23173956 polypeptide=Lus10040470 locus=Lus10040470.g ID=Lus10040470.BGIv1.0 annot-version=v1.0 MARRRILTDMGYEFTLMSADIDEKSIRKDKPEELVMALAEAKADAIVAKMLNTDQMKNYSDPTLLITADTVVVYKGVVREKPTSEEEAREFIKGYSGGHA AVVGSVLVTNLATGSRRGGWESAEVYFHEIPNEVIESLIEERITFKVAGGLTLEHPLTMPFVEAVVGSTDTVSGLPTELTKQLISEVLQPVKS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G66550			Maf-like protein (.1)		Lus10040470 [exp]	0	1
AT3G20440		EMB2729, BE1	EMBRYO DEFECTIVE 2729, BRANCHI...		Lus10003674 [exp]	1.7	0.9246
AT3G53460		CP29	chloroplast RNA-binding protei...		Lus10023191 [exp]	2.2	0.9403
AT5G54190		PORA	protochlorophyllide oxidoreduc...		Lus10043090 [exp]	2.4	0.9266
AT3G52380		CP33, PDE322	PIGMENT DEFECTIVE 322, chlorop...		Lus10016174 [exp]	8.7	0.9234
AT2G01320		ABCG7	ATP-binding cassette G7, ABC-2...		Lus10032449 [exp]	9.2	0.9114
AT5G04810			pentatricopeptide (PPR) repeat...		Lus10043434 [exp]	9.4	0.9153
AT5G58250		EMB3143	EMBRYO DEFECTIVE 3143, unknown...		Lus10035110 [exp]	9.8	0.9188
AT1G22700			Tetratricopeptide repeat (TPR)...		Lus10021972 [exp]	10.5	0.9221
AT3G53460		CP29	chloroplast RNA-binding protei...		Lus10002222 [exp]	14.8	0.9016
AT1G08540		ATSIG1, SIG1, S...	SIGMA FACTOR B, RNA POLYMERASE...		Lus10020325 [exp]	16.2	0.9206

Compare expression of checked genes

Lus10040470 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.