Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G58110 244 / 8e-83 chaperone binding;ATPase activators (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028103 [exp] 376 / 6e-135 AT5G58110 261 / 1e-89 chaperone binding;ATPase activators (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G080900 [exp] 263 / 3e-90 AT5G58110 222 / 4e-74 chaperone binding;ATPase activators (.1) Potri.018G151500 [exp] 256 / 2e-87 AT5G58110 232 / 6e-78 chaperone binding;ATPase activators (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0648 [flax] [poplar] Aha1_BPI PF09229 [flax] [poplar] Aha1_N Activator of Hsp90 ATPase, N-terminal
Representative CDS sequence Show only first row Show all	>Lus10040580 pacid=23157618 polypeptide=Lus10040580 locus=Lus10040580.g ID=Lus10040580.BGIv1.0 annot-version=v1.0 ATGGAGAATGCAAACGAGAGAAAAGAGGAGACGCAGCAAGGTTCTTCTTATACATATTGGGTAAGGAAAGCCACCACGGATGCAGCTCCTGCCCCTCTTC CTAAGAAGCTCTCCCCTCAAGATATTGTCACTGCTCAGCCTAAACCTAACGCCCTCGGATCTGTCTGGAATCGGGCTGGAACTTGGGAGGAGAAGAACCT TAATAAATGGGCAAGTGAGAGGATAAAGGAGCTGCTTACATCAGTGGGATCTTTGGATTTCTCTGGCGGTAAAGCAGAAATAAAACAAGTTTCTAAGTGT TCAGGCGATGCTTTCTTGGTTACTGTCAGAAACAAGAAACGTGTTGGCTATACCTATGAATTAACCTTAGACATTAAAGGAGAATGGATGATCCAAGAGG AAACAAAGACAATTCGTGGACATGTTGATATCCCAGAGTTCTCTTATGGTGAGCTGGATGATTTACAGTTTGAGGTACGGCTCAACGACATAAAGGACTT GTCGCAGCAGGAAAAGCAACGGATCAACAGAGACATGAAGTCATTTATGGAGCCAGTGCGGGAGAAATTGTCCGAATTCGAGCAAGAGCTTAGGGATAGG TAG
AA sequence Show only first row Show all	>Lus10040580 pacid=23157618 polypeptide=Lus10040580 locus=Lus10040580.g ID=Lus10040580.BGIv1.0 annot-version=v1.0 MENANERKEETQQGSSYTYWVRKATTDAAPAPLPKKLSPQDIVTAQPKPNALGSVWNRAGTWEEKNLNKWASERIKELLTSVGSLDFSGGKAEIKQVSKC SGDAFLVTVRNKKRVGYTYELTLDIKGEWMIQEETKTIRGHVDIPEFSYGELDDLQFEVRLNDIKDLSQQEKQRINRDMKSFMEPVREKLSEFEQELRDR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G58110			chaperone binding;ATPase activ...		Lus10040580 [exp]	0	1
AT1G07170			PHF5-like protein (.1.2.3)		Lus10018253 [exp]	1.4	0.8845
AT1G70780			unknown protein		Lus10031920 [exp]	2.0	0.8612
AT3G04780			Protein of unknown function (D...		Lus10001780 [exp]	3.0	0.8717
AT3G21640		FKBP42, UCU2, T...	ULTRACURVATA 2, TWISTED DWARF ...		Lus10039604 [exp]	3.7	0.8394
AT5G47060			Protein of unknown function (D...		Lus10043343 [exp]	3.7	0.8973
AT3G21640		FKBP42, UCU2, T...	ULTRACURVATA 2, TWISTED DWARF ...		Lus10029505 [exp]	4.2	0.8401
AT5G38060			unknown protein		Lus10009105 [exp]	9.2	0.8162
AT2G41475			Embryo-specific protein 3, (AT...		Lus10019416 [exp]	11.5	0.8217
AT3G50830		ATCOR413-PM2, C...	cold-regulated 413-plasma memb...		Lus10012034 [exp]	11.8	0.8406
AT2G34200			RING/FYVE/PHD zinc finger supe...		Lus10025394 [exp]	12.3	0.7679

Compare expression of checked genes

Lus10040580 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.