Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G14090 184 / 3e-56 UDP-Glycosyltransferase superfamily protein (.1) AT1G05560 181 / 4e-55 UGT75B1, UGT1 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) AT4G15550 181 / 8e-55 IAGLU indole-3-acetate beta-D-glucosyltransferase (.1) AT1G05530 169 / 2e-50 UGT75B2, UGT2 UDP-GLUCOSYL TRANSFERASE 2, UDP-glucosyl transferase 75B2 (.1) AT1G24100 152 / 4e-44 UGT74B1 UDP-glucosyl transferase 74B1 (.1) AT1G05680 148 / 1e-42 UGT74E2 Uridine diphosphate glycosyltransferase 74E2 (.1) AT2G31790 147 / 2e-42 UDP-Glycosyltransferase superfamily protein (.1) AT1G05675 146 / 6e-42 UDP-Glycosyltransferase superfamily protein (.1) AT2G31750 143 / 9e-41 UGT74D1 UDP-glucosyl transferase 74D1 (.1) AT2G43840 138 / 6e-39 UGT74F1 UDP-glycosyltransferase 74 F1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021610 [exp] 352 / 1e-121 AT1G05560 372 / 6e-125 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) Lus10019989 [exp] 301 / 4e-101 AT4G15550 379 / 5e-127 indole-3-acetate beta-D-glucosyltransferase (.1) Lus10015515 [exp] 295 / 8e-99 AT4G15550 379 / 3e-127 indole-3-acetate beta-D-glucosyltransferase (.1) Lus10008742 [exp] 166 / 4e-49 AT2G43840 478 / 6e-167 UDP-glycosyltransferase 74 F1 (.1.2) Lus10006351 [exp] 158 / 1e-47 AT1G05680 315 / 9e-106 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10024486 [exp] 158 / 3e-46 AT1G05680 389 / 4e-132 Uridine diphosphate glycosyltransferase 74E2 (.1) Lus10006721 [exp] 155 / 2e-45 AT2G43820 392 / 9e-134 UDP-glucose:salicylic acid glucosyltransferase 1, Arabidopsis thaliana salicylic acid glucosyltransferase 1, UDP-glucosyltransferase 74F2 (.1) Lus10039041 [exp] 154 / 1e-44 AT1G05675 343 / 3e-114 UDP-Glycosyltransferase superfamily protein (.1) Lus10024118 [exp] 153 / 2e-44 AT1G05675 375 / 2e-126 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G055600 [exp] 208 / 2e-65 AT4G15550 442 / 2e-152 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.002G236500 [exp] 201 / 1e-62 AT4G15550 436 / 3e-150 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.017G101800 [exp] 198 / 1e-61 AT4G14090 369 / 3e-124 UDP-Glycosyltransferase superfamily protein (.1) Potri.016G052500 [exp] 198 / 2e-61 AT4G15550 419 / 3e-143 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.002G236400 [exp] 196 / 9e-61 AT1G05560 442 / 1e-152 UDP-GLUCOSE TRANSFERASE 1, UDP-glucosyltransferase 75B1 (.1) Potri.014G146000 [exp] 194 / 6e-60 AT4G15550 429 / 2e-147 indole-3-acetate beta-D-glucosyltransferase (.1) Potri.004G083700 [exp] 193 / 3e-59 AT4G14090 374 / 3e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.001G389200 [exp] 166 / 3e-49 AT1G05680 494 / 2e-173 Uridine diphosphate glycosyltransferase 74E2 (.1) Potri.015G071900 [exp] 161 / 1e-47 AT1G24100 427 / 5e-147 UDP-glucosyl transferase 74B1 (.1) Potri.014G175000 [exp] 157 / 9e-46 AT2G43840 411 / 8e-141 UDP-glycosyltransferase 74 F1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10040591 pacid=23157831 polypeptide=Lus10040591 locus=Lus10040591.g ID=Lus10040591.BGIv1.0 annot-version=v1.0 ATGGCAGTAATATCGAAGAAGCAAAGGGAAGAGTTGGCAAAAGGACTAGTGAGTAGTAACAGACCGTTTTTGTGGGTGATAAGAAAAGATGAATCAGTGG AGAAAGAAGAAGAGAGGATTGAGATGGTGCGATGGAGAGAGGAGATGGAGACCAAGGCAGAGAGTGTCGGTGGGAAAATAGTTGAATGGTGCTCGCAGGT GGAGGTGCTTCCACATGAAGCAGTAGGATGTTTTGTAACGCACTGCGGATGGAACTCGACGCTAGAGAGCATATGTTTGGGAGTACCACTGGTGGCTTTC CCGCAATTTTCGGATCAAACCACGAATGCGAAGATGGTAGAGGCTGTGTGGAAGATAGGGGTGAGGGTGGTAGTGCCTGACCAGAAACCTGAAACAGGGG AGGTGGCGGTCGTGGTGGAGGGTGATGAGATAAGGAGATGTTTGGATTTGGTGATGGGAGAAGGCCAGGTTAGGGAACAGGTTAGGACAAATGCAAATAA GTGGAAGCAACTTGCTAGAGACGCGTTGCGAGAAGGTGGATCTTCGCATTCCAATATCAAAGCTTTTGTCGACCAAATTATCGGTAAACGATTGTAG
AA sequence Show only first row Show all	>Lus10040591 pacid=23157831 polypeptide=Lus10040591 locus=Lus10040591.g ID=Lus10040591.BGIv1.0 annot-version=v1.0 MAVISKKQREELAKGLVSSNRPFLWVIRKDESVEKEEERIEMVRWREEMETKAESVGGKIVEWCSQVEVLPHEAVGCFVTHCGWNSTLESICLGVPLVAF PQFSDQTTNAKMVEAVWKIGVRVVVPDQKPETGEVAVVVEGDEIRRCLDLVMGEGQVREQVRTNANKWKQLARDALREGGSSHSNIKAFVDQIIGKRL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G14090			UDP-Glycosyltransferase superf...		Lus10040591 [exp]	0	1
AT4G14550	AUX_IAA	SLR, IAA14	SOLITARY ROOT, indole-3-acetic...		Lus10018766 [exp]	3.3	0.9612
AT5G03960		IQD12	IQ-domain 12 (.1)		Lus10018031 [exp]	6.0	0.9528
AT3G61640		AGP20, ATAGP20	arabinogalactan protein 20 (.1...		Lus10033939 [exp]	7.2	0.9547
AT4G31470			CAP (Cysteine-rich secretory p...		Lus10013693 [exp]	9.4	0.9520
AT3G24450			Heavy metal transport/detoxifi...		Lus10017730 [exp]	11.5	0.9498
AT3G25070		RIN4	RPM1 interacting protein 4 (.1...		Lus10006451 [exp]	13.0	0.9277
AT5G15140			Galactose mutarotase-like supe...		Lus10005251 [exp]	13.4	0.9451
AT1G06930			unknown protein		Lus10009096 [exp]	13.8	0.9172
AT5G39050		PMAT1	phenolic glucoside malonyltran...		Lus10029797 [exp]	15.3	0.8729
AT4G02330		AtPME41, ATPMEP...	pectin methylesterase 41, Plan...		Lus10031470 [exp]	15.6	0.9447

Compare expression of checked genes

Lus10040591 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.