Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G02910 136 / 2e-41 AIG2-like (avirulence induced gene) family protein (.1) AT5G46720 104 / 3e-29 AIG2-like (avirulence induced gene) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018276 [exp] 209 / 3e-68 AT3G02910 142 / 4e-41 AIG2-like (avirulence induced gene) family protein (.1) Lus10034712 [exp] 142 / 6e-44 AT5G46720 159 / 3e-50 AIG2-like (avirulence induced gene) family protein (.1) Lus10040471 [exp] 0 / 1 ND 52 / 1e-26
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G041100 [exp] 187 / 1e-61 AT3G02910 220 / 7e-74 AIG2-like (avirulence induced gene) family protein (.1) Potri.003G092600 [exp] 108 / 2e-30 AT5G46720 144 / 8e-44 AIG2-like (avirulence induced gene) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0278 [flax] [poplar] AIG2 PF06094 [flax] [poplar] GGACT Gamma-glutamyl cyclotransferase, AIG2-like
Representative CDS sequence Show only first row Show all	>Lus10040635 pacid=23157720 polypeptide=Lus10040635 locus=Lus10040635.g ID=Lus10040635.BGIv1.0 annot-version=v1.0 ATGCAGACAGGAGACGCAGTCTTCCGATGCAATTGCCGAACCGTCGACGCCTTCCCTCTCGTCTGTGGTCCTTACCGTGTCCCCTTCCTCCTCAACCTTC CCGGAGCTGACGGAGCCAATCGAGTCTCCGGCGAGATGTACGCCGTCTCCGCACGTGGTCTCGCACGCCTGGACGAGCTTGAAGGCACCGTCACCGGCCA TTACGAGCGGTTGGCGGTTGAGGAGGAGATCGAGTCTGTGGAGGCATATTTCGCGGACAGGAGCTACGCAGTGGATATGTGGGAGAAGAGCGGGAGGATC GGGTATTCCGTGTACGGAGAGAAGGAATCGAAAGGATACGTGAGGAGGATCGATCGGCCTGTGAATTCAAGCTTTCTGGAGCAGATTCGTGTATTCATTT CCTCCGGCCAAACCTGA
AA sequence Show only first row Show all	>Lus10040635 pacid=23157720 polypeptide=Lus10040635 locus=Lus10040635.g ID=Lus10040635.BGIv1.0 annot-version=v1.0 MQTGDAVFRCNCRTVDAFPLVCGPYRVPFLLNLPGADGANRVSGEMYAVSARGLARLDELEGTVTGHYERLAVEEEIESVEAYFADRSYAVDMWEKSGRI GYSVYGEKESKGYVRRIDRPVNSSFLEQIRVFISSGQT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G02910			AIG2-like (avirulence induced ...		Lus10040635 [exp]	0	1
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10038866 [exp]	1.7	0.8946
AT4G19950			unknown protein		Lus10038358 [exp]	2.0	0.9033
AT2G43250			unknown protein		Lus10040469 [exp]	3.2	0.8545
AT3G57340			Heat shock protein DnaJ, N-ter...		Lus10030079 [exp]	3.2	0.9016
AT5G10050			NAD(P)-binding Rossmann-fold s...		Lus10004925 [exp]	6.0	0.7971
AT1G17100			SOUL heme-binding family prote...		Lus10042093 [exp]	6.3	0.8551
AT2G39050		ArathEULS3	Euonymus lectin S3, hydroxypro...		Lus10006551 [exp]	6.5	0.8526
AT4G25570		ACYB-2	Cytochrome b561/ferric reducta...		Lus10014986 [exp]	6.7	0.7991
AT3G06170			Serinc-domain containing serin...		Lus10004430 [exp]	8.5	0.8248
AT4G29680			Alkaline-phosphatase-like fami...		Lus10008562 [exp]	9.5	0.8472

Compare expression of checked genes

Lus10040635 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.