Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G58630 41 / 0.0008 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10018244 [exp] 368 / 3e-128 AT5G58630 60 / 6e-10 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G046900 [exp] 74 / 1e-14 AT5G58630 74 / 3e-14 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10040661 pacid=23157798 polypeptide=Lus10040661 locus=Lus10040661.g ID=Lus10040661.BGIv1.0 annot-version=v1.0 ATGAAACATTTGCTTCCAGACCGGGAAATGTGTTCCTCTTCCCGTAGCTTTACGACTTCCGGCTGCATCTCCGGCCTTCTCACTCGGATCCTCTGCCCTC GCTCTGCCCCGACTCACCTTTCCTATGATGCTAATTGCGATGTTGAACTGGGTACTAACCCAATTTGTCATAATCCTGTTGCTGCTCCAGGAATTATCGC TAGGTTGATGGGTTTGGAGCAACCGGGTGGTGGTTCGATTTACAGAAGCCGGTCGATGAATTCACTCGAGTTTGGTAAAGCTGCAATGGATGGATTTGAG GGGAAGAAGAAGCATCACAGGCGGACCAAGAGCAGAACGATGTCGTTGACCGAAAACGATGAGTTCCTTGTCCTCAGCTTTGAAGAATTTGGAAACAGAG GAGATGGGAAAACAGAGGAAACAGAGTTCATCGAGCGAATGGTGTCTAGAATCCTGTCGGAGGAATCCGCCGTCAGAGATCGATTCTTCTCCGGCGAAGA AACTTTTCACCCGTCCCGAGAAAACCCTAAGATTTCGAATTCTAGATGCCAAGAAGCAACGGAATGTTGCAGTTCTTCATCTTTGAGTCCGGTCTCCGTT CTTGATTCCAGCCGTCAATTCACTCTCGATAACGAAGTCTCCACGTCATCAGAGGATTCGGAAACAGAGCCATCGGGTAAACTGAAGAAAGTTTTGCTCA AGCGGCTTCCTCCGGATCTGTGGGAGGGTATCTGCAAGATGGCTGAATCCGATGTCGTAGAAGGGTTGAACTGGAATCGAATGCCCCGATCAAAGAACGA GATCAGACATTTCGAAATCGAAATGGTCGGGGCCGAATTGGAATCGTACATACTGGATCAGTTGTTAGATGAACTGGTGGCTGTAGAATGTACATCACAT AGGTAG
AA sequence Show only first row Show all	>Lus10040661 pacid=23157798 polypeptide=Lus10040661 locus=Lus10040661.g ID=Lus10040661.BGIv1.0 annot-version=v1.0 MKHLLPDREMCSSSRSFTTSGCISGLLTRILCPRSAPTHLSYDANCDVELGTNPICHNPVAAPGIIARLMGLEQPGGGSIYRSRSMNSLEFGKAAMDGFE GKKKHHRRTKSRTMSLTENDEFLVLSFEEFGNRGDGKTEETEFIERMVSRILSEESAVRDRFFSGEETFHPSRENPKISNSRCQEATECCSSSSLSPVSV LDSSRQFTLDNEVSTSSEDSETEPSGKLKKVLLKRLPPDLWEGICKMAESDVVEGLNWNRMPRSKNEIRHFEIEMVGAELESYILDQLLDELVAVECTSH R

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G58630			unknown protein		Lus10040661 [exp]	0	1
AT5G50760			SAUR-like auxin-responsive pro...		Lus10003140 [exp]	4.9	0.9363
AT4G27290			S-locus lectin protein kinase ...		Lus10016871 [exp]	5.1	0.9436
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10032220 [exp]	6.9	0.9329
AT1G20640		NLP4	Plant regulator RWP-RK family ...		Lus10014429 [exp]	9.2	0.9303
AT4G23180		RLK4, CRK10	cysteine-rich RLK (RECEPTOR-li...		Lus10007631 [exp]	10.1	0.9307
AT2G19130			S-locus lectin protein kinase ...		Lus10042266 [exp]	10.1	0.9344
AT5G42020		BIP2, BIP	luminal binding protein, Heat ...		Lus10007778 [exp]	10.8	0.9156
AT3G21530			DNAse I-like superfamily prote...		Lus10012772 [exp]	11.6	0.9326
AT5G65030			unknown protein		Lus10014339 [exp]	11.7	0.9281
AT1G51340			MATE efflux family protein (.1...		Lus10026303 [exp]	15.9	0.9172

Compare expression of checked genes

Lus10040661 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.