Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G29560 764 / 0 ENOC cytosolic enolase (.1) AT2G36530 469 / 1e-162 ENO2, LOS2 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) AT1G74030 454 / 1e-156 ENO1 enolase 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10016447 [exp] 872 / 0 AT2G29560 713 / 0.0 cytosolic enolase (.1) Lus10015028 [exp] 463 / 2e-160 AT2G36530 802 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10002844 [exp] 461 / 1e-159 AT2G36530 800 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10003374 [exp] 458 / 3e-158 AT2G36530 799 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038904 [exp] 454 / 6e-157 AT2G36530 792 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10038963 [exp] 452 / 2e-155 AT1G74030 808 / 0.0 enolase 1 (.1) Lus10027255 [exp] 447 / 1e-153 AT1G74030 799 / 0.0 enolase 1 (.1) Lus10035579 [exp] 438 / 8e-151 AT2G36530 775 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Lus10008647 [exp] 387 / 5e-128 AT2G36530 687 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.009G040700 [exp] 794 / 0 AT2G29560 809 / 0.0 cytosolic enolase (.1) Potri.006G116800 [exp] 466 / 1e-161 AT2G36530 814 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.012G057500 [exp] 467 / 2e-161 AT1G74030 810 / 0.0 enolase 1 (.1) Potri.015G131100 [exp] 464 / 5e-161 AT2G36530 811 / 0.0 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1) Potri.012G129300 [exp] 158 / 2e-45 AT2G36530 260 / 1e-85 LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2, ENOLASE 2, Enolase (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0227 [flax] [poplar] Enolase_N PF03952 [flax] [poplar] Enolase_N Enolase, N-terminal domain CL0256 [flax] [poplar] Enolase_TIM PF00113 [flax] [poplar] Enolase_C Enolase, C-terminal TIM barrel domain
Representative CDS sequence Show only first row Show all	>Lus10040711 pacid=23157669 polypeptide=Lus10040711 locus=Lus10040711.g ID=Lus10040711.BGIv1.0 annot-version=v1.0 ATGTCAGTGCAGGAGTATCTGGAAAAGCACATGCTCTCTCGGAAAATTGAGGACGCCGTCAATGCCGCCGTCCGGGCGAAAACTCCCGATCCCGTTCTCT TTATCTCGAATCATATGAAGAAGGCGGTTCCATCAGTTATAACGAAGATTCGAGCGAGGCAAATCCTCGATAGCAGAGGGATTCCAACTGTTGAAGTGGA CTTGTACACTAACAAAGGGATGTTCCGCGCTTCTGCTCCTAGCGGCGATGTTACTGGAATGTATGAAGCTGTGGAGCTACGTGATGGGGACAAAGGAGTG TATCTTGGAAATGGTGTGATGAGAGCTGTCAGGAACATCAATGAGAAAATCTCCGAAGCATTGGTTGGTATGGATCCAACACTGCAGTCTCAAATTGATC AGGCCATGATAGACTTGGACAAAACAGAAAAGAAGGGTGAACTTGGAGCTAATGCCATATTAGCAGTGTCAATTGCTGCTTGCAAGGCTGGGGCTGCTGA AAGAGAGGCATGTCTTGTTCTAGTCTTGATATTGTGTTGTTTTGCACATTTTCAATTATTTTTGTTCTTCCAACTTACGGATCTGACGTTTACATCTCAG CTTCCACTCTACAAGCATATTGCTGAGCTTTTTGGTAACACCAGCTTGACACTTCCTGTCCCTGCCTTTACTGTCATCAGTGGTGGAAAGCACGCTGGAA ATAATTTGGCCATTCAGGATATCATGATTCTTCCGATTGGAGCCAACAGATTCGAGGAGGCATTGCAGATGGGCTCTGAGACTTATTATCATCTAAAGGC TGTTATTACAGAAAAATATGGCATACATGGATGTAATGTCGGTGAAGATGGTGGCTTTGCTCCAAACATCTCAAGGCAAGTATTTGTTTCCCTTAGCATT CGAGAAGGTTTAGATTTTGTTAAAGAGGCTATTGACAGAACAGGTTACAAAGACAGGATAAAGATAGCAATTGATGTTGCTGCCACTGACTTTTGCATAG GCACAAAGTATGATTTGGATTTTAAAACTCCTAACAAATCAGGGCAAAATTTCAAGTCAGGGGAGGATATGATTGAGATGTACAAAGAGCTATGTGCTGA GTACCAAATTGTGTCAGTTGAAGATCCATTCGACAAAGAAGATTGGGAACACATCAAATACTTTTCTAGCCTTGGACTGTGTCAGGTGGTAGGTGATGGC TTGTTAATGTCGAATCCAAAACGAGTAGAGAGAGCCATACGTGAATCCACTTGCAATGCTCTTCTTCTCAAGGTCAATCAAATTGGAACGGTAACGGAAG TGTTCGAGGTAGTGAGGCTGGCTAAGGACGCCCACTGGGGGGTAGTGGCATCTCACAGAAGCGGAGAGACCGAAGATTCGTTCATATCCGATTTAGCCGT AGGGCTCGGGTTAGGCCAGATCAAAGCCGGAGCTCCTTGCAGAGGAGAGCGTGTGGCCAAGTACAATCAGTTGCTCCGGATCGAGGAAGAGTTTGGGGAT CAGATGGTGTATGCAGGGGAAGATTGGAGATCGATCTGA
AA sequence Show only first row Show all	>Lus10040711 pacid=23157669 polypeptide=Lus10040711 locus=Lus10040711.g ID=Lus10040711.BGIv1.0 annot-version=v1.0 MSVQEYLEKHMLSRKIEDAVNAAVRAKTPDPVLFISNHMKKAVPSVITKIRARQILDSRGIPTVEVDLYTNKGMFRASAPSGDVTGMYEAVELRDGDKGV YLGNGVMRAVRNINEKISEALVGMDPTLQSQIDQAMIDLDKTEKKGELGANAILAVSIAACKAGAAEREACLVLVLILCCFAHFQLFLFFQLTDLTFTSQ LPLYKHIAELFGNTSLTLPVPAFTVISGGKHAGNNLAIQDIMILPIGANRFEEALQMGSETYYHLKAVITEKYGIHGCNVGEDGGFAPNISRQVFVSLSI REGLDFVKEAIDRTGYKDRIKIAIDVAATDFCIGTKYDLDFKTPNKSGQNFKSGEDMIEMYKELCAEYQIVSVEDPFDKEDWEHIKYFSSLGLCQVVGDG LLMSNPKRVERAIRESTCNALLLKVNQIGTVTEVFEVVRLAKDAHWGVVASHRSGETEDSFISDLAVGLGLGQIKAGAPCRGERVAKYNQLLRIEEEFGD QMVYAGEDWRSI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G29560		ENOC	cytosolic enolase (.1)		Lus10040711 [exp]	0	1
AT2G29560		ENOC	cytosolic enolase (.1)		Lus10016447 [exp]	2.0	0.7434
AT1G61240			Protein of unknown function (D...		Lus10038303 [exp]	4.9	0.7725
AT2G05710		ACO3	aconitase 3 (.1)		Lus10031561 [exp]	6.3	0.7331
AT5G52560		ATUSP	UDP-sugar pyrophosphorylase (....		Lus10028658 [exp]	20.0	0.7605
AT4G27290			S-locus lectin protein kinase ...		Lus10037736 [exp]	40.8	0.7252
AT5G11540			D-arabinono-1,4-lactone oxidas...		Lus10038620 [exp]	54.3	0.7131
AT3G52900			Family of unknown function (DU...		Lus10034160 [exp]	79.5	0.6800
AT1G23420	YABBY	INO, YAB4	INNER NO OUTER, Plant-specific...		Lus10030893 [exp]	111.7	0.6830
AT1G08190		ZIP2, ATVPS41, ...	ZIGZAG SUPPRESSOR 2, vacuolar ...		Lus10005352 [exp]	125.3	0.6745
AT2G03500	GARP		Homeodomain-like superfamily p...		Lus10020995 [exp]	127.9	0.6763

Compare expression of checked genes

Lus10040711 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.