Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G02090 814 / 0 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G16480 177 / 3e-49 MPPALPHA mitochondrial processing peptidase alpha subunit (.1) AT1G51980 175 / 2e-48 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G57470 53 / 4e-07 Insulinase (Peptidase family M16) family protein (.1), Insulinase (Peptidase family M16) family protein (.2), Insulinase (Peptidase family M16) family protein (.3) AT2G41790 53 / 5e-07 Insulinase (Peptidase family M16) family protein (.1) AT1G06900 52 / 7e-07 Insulinase (Peptidase family M16) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040885 [exp] 965 / 0 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004939 [exp] 947 / 0 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004938 [exp] 619 / 0 AT3G02090 546 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10035000 [exp] 176 / 1e-48 AT1G51980 631 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10025839 [exp] 175 / 3e-48 AT1G51980 643 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004937 [exp] 163 / 7e-48 AT3G02090 151 / 6e-44 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10038262 [exp] 173 / 9e-48 AT1G51980 637 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10012926 [exp] 134 / 4e-33 AT3G16480 504 / 3e-173 mitochondrial processing peptidase alpha subunit (.1) Lus10012918 [exp] 55 / 2e-07 AT5G56730 1501 / 0.0 Insulinase (Peptidase family M16) protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G092400 [exp] 835 / 0 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.004G118900 [exp] 823 / 0 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.001G191100 [exp] 180 / 3e-50 AT1G51980 620 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.008G193200 [exp] 179 / 8e-50 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.010G036700 [exp] 163 / 5e-44 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.013G154600 [exp] 54 / 2e-07 AT1G06900 1461 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.006G050700 [exp] 53 / 5e-07 AT2G41790 1503 / 0.0 Insulinase (Peptidase family M16) family protein (.1) Potri.014G149200 [exp] 47 / 5e-05 AT5G42390 1815 / 0.0 stromal processing peptidase, Insulinase (Peptidase family M16) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10040886 pacid=23157659 polypeptide=Lus10040886 locus=Lus10040886.g ID=Lus10040886.BGIv1.0 annot-version=v1.0 ATGGCATCGAAGCACATCCTCACTCTGGCTCGACGGTCGCATCACCGGCTTCGATCATCTCCGGCCATTCTATCCGCCATTCGATCATCATCTTCTTCCT CGGCTGTGGCCGAATCTCACGCTTCATCACCTCCCTCTCCACCCCCGCCAAACGCCATGATCTACGATCGCCTCGCTGAATCAGTGACTTCGAAAATCAA ACAGCTCGACAATCCGGATCCCAGATTCCTCAAGTACGGATCGCCTCGCCCTACTCTGCGAAGTCACACGCACATCCTCTCTGCTCCCGAAACCCGCGTC ACCACTCTTCCCAATGGCCTTCGCGTCGCCACCGAGTCTTCACTCTCCGCGAAAACCGCCACTGTTGGTGTTTGGATTGATGCCGGGTCCAGATTCGAGA CTGACGAGACCAATGGAACTGCTCACTTCTTGGAGCATATGATATTCAAGGGGACTGAGAAGAGGTCGGCTAGGGAGCTGGAAGAGGAGATCGAGAACAT GGGAGGACATTTGAATGCCTACACGAGCAGAGAGCAGACTACGTATTATGCCAAAATTATGGACAAAAATGTTAATCAGGCTATGGATATTTTAGCTGAT ATATTGCAGAATTCCAAGTTCGAGGAGAAGCCGATTGCTAGGGAACGAGATGTCATTTTGAGAGAAATGGAAGAGGTTGAAGGGCAGACTGAAGAAGTCA TCTTTGATCACTTGCATGCCACTGCTTTCCAGTACACTCCTTTGGGTCGCACTATTCTTGGCCCTGCTAAAAATATTAAGACAATTACCAGAGATAACCT TCAGAGCTATATCAAGACACACTATACAGCTCCCAGAATGGTAATTGCTGCTTCTGGAGCTGTCAAACATGAAGATATAGTTGATCAAGCAAAGAAGCTA TTTACAAATCTGTCATCTGAACCAACTACTGCTTCACAGTTAGTGTCAAATGAACCTGCATTTTTCACTGGTTCTGAGGTTAGGATAATCGATGATGACC TCCCTTTGGCACAATTCGCTGTTGCTTTTGAAGGTGCTTCATGGACGGATCCCGATTCTGTAGCTCTTATGGTCGTTCAGTCTATGTTAGGTTCATGGAA CAAAAGTGCTGGTGGTGGCAAGCACATGGGTTCTGAGCTGGTACAGAAGGTTAGTGTTAATGAGCTTGCAGAAAGTGTAATGGCTTTCAACACTAACTAC AAAGACACTGGACTGTTTGGTGTCTATGCAGTAGCAAAGCCTGAGGATTTGGATGATTTGACCTATGCAATCATGTACGAGATTGCCAAGTTGTCTTTCC GAGTTTCAGAAGATGATGTGATCCGTGCTCGAAATCAGTTGAAGTCCTCCTTGTTACTTCATATGGATGGGACTAGTCCTGTAGCTGAAGATATTGGGCG CCAGCTACTGACTTACGGACGAAGAATTCCATCGGCGGAATTATTTGCGAGGATAGATGCTGTGGATGCAAGCACCATTAAACGTGTGGCAAACCGATTC ATTTACGACAAGGATGTTGCGATTGCTGCCATGGGTCCAGTTCAAGGGTTGCGAGACTACAACTGGTTCAGACGTAGAACTTACTTCCTCCGGTACTAA
AA sequence Show only first row Show all	>Lus10040886 pacid=23157659 polypeptide=Lus10040886 locus=Lus10040886.g ID=Lus10040886.BGIv1.0 annot-version=v1.0 MASKHILTLARRSHHRLRSSPAILSAIRSSSSSSAVAESHASSPPSPPPPNAMIYDRLAESVTSKIKQLDNPDPRFLKYGSPRPTLRSHTHILSAPETRV TTLPNGLRVATESSLSAKTATVGVWIDAGSRFETDETNGTAHFLEHMIFKGTEKRSARELEEEIENMGGHLNAYTSREQTTYYAKIMDKNVNQAMDILAD ILQNSKFEEKPIARERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAKNIKTITRDNLQSYIKTHYTAPRMVIAASGAVKHEDIVDQAKKL FTNLSSEPTTASQLVSNEPAFFTGSEVRIIDDDLPLAQFAVAFEGASWTDPDSVALMVVQSMLGSWNKSAGGGKHMGSELVQKVSVNELAESVMAFNTNY KDTGLFGVYAVAKPEDLDDLTYAIMYEIAKLSFRVSEDDVIRARNQLKSSLLLHMDGTSPVAEDIGRQLLTYGRRIPSAELFARIDAVDASTIKRVANRF IYDKDVAIAAMGPVQGLRDYNWFRRRTYFLRY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G02090		MPPBETA	Insulinase (Peptidase family M...		Lus10040886 [exp]	0	1
AT5G63870		PP7, ATPP7	serine/threonine phosphatase 7...		Lus10033478 [exp]	2.4	0.8221
AT3G28715			ATPase, V0/A0 complex, subunit...		Lus10005252 [exp]	4.1	0.8711
AT1G79990			structural molecules (.1.2.3.4...		Lus10035895 [exp]	4.9	0.8327
AT2G26730			Leucine-rich repeat protein ki...		Lus10017756 [exp]	8.6	0.8438
AT1G77610			EamA-like transporter family p...		Lus10042700 [exp]	9.8	0.7992
AT1G18260		HRD3A, EBS5	EMS-mutagenized bri1 suppresso...		Lus10009680 [exp]	10.5	0.7793
AT3G11320			Nucleotide-sugar transporter f...		Lus10009878 [exp]	13.0	0.7984
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10011089 [exp]	19.5	0.8228
AT1G54220			Dihydrolipoamide acetyltransfe...		Lus10037617 [exp]	21.2	0.7960
AT5G61790		CNX1, ATCNX1	calnexin 1 (.1)		Lus10032521 [exp]	21.5	0.8246

Compare expression of checked genes

Lus10040886 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.