Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G45760 92 / 6e-23 BAL, BAP2 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) AT3G61190 86 / 4e-21 BAP1 BON association protein 1 (.1.2) AT2G13350 54 / 2e-08 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT3G04360 51 / 1e-07 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT2G33320 49 / 1e-06 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT1G04540 45 / 1e-05 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT4G15755 42 / 8e-05 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) AT4G01200 40 / 0.0004 Calcium-dependent lipid-binding (CaLB domain) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036571 [exp] 248 / 2e-84 AT2G45760 105 / 2e-28 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10009818 [exp] 181 / 1e-57 AT2G45760 120 / 6e-34 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10040924 [exp] 179 / 5e-57 AT2G45760 119 / 3e-33 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Lus10003570 [exp] 54 / 1e-08 AT2G33320 222 / 7e-67 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Lus10032780 [exp] 53 / 4e-08 AT2G33320 227 / 1e-70 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Lus10014466 [exp] 44 / 5e-05 AT1G04540 245 / 7e-76 Calcium-dependent lipid-binding (CaLB domain) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G155300 [exp] 149 / 2e-45 AT2G45760 120 / 4e-34 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Potri.014G078700 [exp] 147 / 6e-45 AT2G45760 116 / 1e-32 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Potri.014G078600 [exp] 136 / 1e-40 AT2G45760 105 / 2e-28 BON ASSOCIATION PROTEIN 1-LIKE, BON association protein 2 (.1) Potri.010G024200 [exp] 61 / 6e-11 AT3G16510 135 / 5e-37 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.013G048400 [exp] 57 / 9e-10 AT2G33320 211 / 6e-63 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.010G065300 [exp] 52 / 5e-08 AT2G13350 261 / 6e-83 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.008G172300 [exp] 52 / 6e-08 AT2G33320 265 / 8e-82 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.019G021300 [exp] 50 / 3e-07 AT3G04360 213 / 2e-65 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.001G070400 [exp] 46 / 6e-06 AT3G16510 82 / 4e-17 Calcium-dependent lipid-binding (CaLB domain) family protein (.1) Potri.003G160400 [exp] 45 / 2e-05 AT3G16510 72 / 8e-14 Calcium-dependent lipid-binding (CaLB domain) family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10040923 pacid=23180045 polypeptide=Lus10040923 locus=Lus10040923.g ID=Lus10040923.BGIv1.0 annot-version=v1.0 ATGGCGAAATCCAGGACTCTCGAATTCACGATTCTCTCGGCTGAAGACCTCCGCATCGACGGGAGATCCCTCAAGAAGAACGCGTTCGCTCTGGTCAGAA CCGACCCGTTCATTTCCATATCGACCGGGGCGGACTCCGACGGCGGGAGTTACCCTCGCTGGAACGAGAAGCTAGTCGTCGGGTTGCTGGAGAGGACTCC ATCCGTAACCGTGGAGGTCCAATGCAAGGTCGGATCCGGAAACAAAGTGGTCGGCACGGCCACCGTTCCTGTCTCGGATTTCTTGGGAGACCTGACGCCG GAGAATTACCTGCACTTTCTGAGCTACAGGTTGCGGGATCCGCGTGGGGTGAGGAATGGAATTATTAATTTGTCTGTTAAGGTTAGTGGCGGCGGAAGCG GGGGGATTGGAGATTATGGCTGTTCGGTGGCGGCGAGGAAGAAGGAGGCATCGGGATTTGGAGGTGGTTATGCTGCTTCTTCTACTCCTTCTTGGAAGAC GACGCCGTCGTCGTCGTGGGGAATGCCGGTGGCGCGTCAGGGTGACCGTTGCGGTGGCGGCGGAGTGGTCACTGGCGTTCCTGTTTGGGGGATGCATCGC ACTTGA
AA sequence Show only first row Show all	>Lus10040923 pacid=23180045 polypeptide=Lus10040923 locus=Lus10040923.g ID=Lus10040923.BGIv1.0 annot-version=v1.0 MAKSRTLEFTILSAEDLRIDGRSLKKNAFALVRTDPFISISTGADSDGGSYPRWNEKLVVGLLERTPSVTVEVQCKVGSGNKVVGTATVPVSDFLGDLTP ENYLHFLSYRLRDPRGVRNGIINLSVKVSGGGSGGIGDYGCSVAARKKEASGFGGGYAASSTPSWKTTPSSSWGMPVARQGDRCGGGGVVTGVPVWGMHR T

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G45760		BAL, BAP2	BON ASSOCIATION PROTEIN 1-LIKE...		Lus10040923 [exp]	0	1
AT2G38150			alpha 1,4-glycosyltransferase ...		Lus10004828 [exp]	3.0	0.8346
AT1G24530			Transducin/WD40 repeat-like su...		Lus10011402 [exp]	3.0	0.8626
AT5G52280			Myosin heavy chain-related pro...		Lus10029303 [exp]	3.2	0.8549
AT1G78570		ATRHM1, RHM1, R...	REPRESSOR OF LRX1 1, ARABIDOPS...		Lus10020776 [exp]	3.2	0.8252
AT1G15170			MATE efflux family protein (.1...		Lus10018135 [exp]	3.5	0.8588
AT1G13570			F-box/RNI-like superfamily pro...		Lus10006346 [exp]	3.5	0.8401
AT5G59730		ATEXO70H7	exocyst subunit exo70 family p...		Lus10005436 [exp]	3.7	0.8697
AT5G15430			Plant calmodulin-binding prote...		Lus10015733 [exp]	5.7	0.8742
AT1G32920			unknown protein		Lus10001526 [exp]	7.5	0.8385
					Lus10026124 [exp]	8.4	0.7932

Compare expression of checked genes

Lus10040923 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.