Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G32190 350 / 5e-111 Myosin heavy chain-related protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006190 [exp] 974 / 0 AT4G32190 387 / 1e-124 Myosin heavy chain-related protein (.1) Lus10001498 [exp] 63 / 1e-11 AT4G32190 72 / 1e-15 Myosin heavy chain-related protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G255800 [exp] 440 / 7e-146 AT4G32190 546 / 0.0 Myosin heavy chain-related protein (.1) Potri.018G026300 [exp] 82 / 8e-17 AT4G32190 99 / 1e-22 Myosin heavy chain-related protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041037 pacid=23179996 polypeptide=Lus10041037 locus=Lus10041037.g ID=Lus10041037.BGIv1.0 annot-version=v1.0 ATGGATTCCATTGCTGCTCTCCGTCTCAGTTCCCCCCCATTCTCTTCTCGTCATCGTTGCTCTCAGCTGTTCTCATCGGAATCTAGCTTGAAAGGGAATA AGTTAACAACTATAGCAATCGGAAGAAGGAAGGCTGTTTCGTTAAGTATTGTCAAGGCGGTATTGGACAGCAGGAACCCGGGCATCAATGGCCGTAGTAG CGCGACTGTAGCTGCGAGAATACTTCTCGAGAGGCTGTTTGCACAGACGCAGAAGATTGAAGAACAGATGACCAAACACTCTCAATTCCCCACGGATATA AATCTGGAAATCCTGGAATCCGATCTTGTTGCTGTGTTGGAAGCTCTTAGAAACAAGGAAGAAAACCTTCATACCGCAGAAATGAAAGTAGAAGCTGAGC GCGGTGAGCTGGACCGCGCTAGAAAGGAATTAGAGCGACGGGAAGAGGAAATAGCTAATGTTTATGCCAAGTATGAAAGGCTGGAAACAGAGCTGAAGCA ATCAAATCTCCATTTGGCTTCTCAGGCCAAGCAGATTGAGGATTTGAGGTTTCAGCTTACGGAAAGAGACCGCGAGGTTGCTGCCGTGCGTTCTGCTTTG TTGTTCAAAGAAGATGAAATGGAGAAAATACAGATGGAATTCGTTGAAAAAAATGCGGAGTTTGCTATGCTGGAATCCGAATTTCGGAGCAAGGTTCAAC TGCTTAATAGAGCCAACGAGGTCATTAACGATCAAGAGATTGAGATTCAACAACTGAGAAATGTGGTTCAAGAGAAAGAAAAAGAACTGGAAACTTCGGC TGCTTTGAGGATACTTGAACAGCAAAAGGTGAATGCTTTGGAGGCGAATTTGAGGAAGCAGACAAAGGAGTGGTTGTTGGCACAGGAAGAGTTGAAGAAG TTATATGAGGAAGCGTCTGATCAGTTGGTGGAAACCAATGAAACTTTAGAGGATTACAGAAGAGTCAAGCTGCTTCTTGCAGGTGTGAGATCTGAGCTCG TGGCTTCGCAAAAGTCTCTGGCATTCTCCAGGAAGGGAATGGAAGAACAGGAACTAAGTTTAAGAAAGCAACTGGTAGATCTTGAGGAAGAAAGGATGAG TCTTGCATCTTACGTTACCAATCTGAGAGATGCCAGGAGACAAGTTGATAGTGAGCAAACAAAGCTCAAGGTTTCTGAGGCACGAAACAAGGAGCTCGAA CGAGAACTATTGTCGGAGAAGGAGACGATTGAAGAGTTGAGAGAGGCGCTGAGGAACGACAAGTCTTCTCTGCAACGAGTGACGCAGCAGATTTCGTTGG TGAGATCGGAACTGGAGAAGAAGGCGGCGAATTTGAAAGAGTTGCAGAGTGTTCTTCGGAATAAGGATGCTGAACTGGTACAGGCTAAGCTTGACATCGG GCGGCTGAAATCGGAGAGGGAATCTCTTTTGCTTGATATGGAGGACAAAGATTCGCGGTTGGTGAATGAAGTGGAGAAATTGGATGAAGTGAATCAGGAG GTTGCAGAGCTAAGGATGATGATGAACGGTAAAGAAGATCAACTTATGCAAGCTACTACTTTGCTGAAGGATAAAGAAAACCAGGTCCAGTTTATGCAGA GTGAACTGGATGATACCAGATTGAAAGTAGCAGAAGCCGAAACTGCTGTGCAAGGATTAGTGGATCTTACAAACAAACTAGTATCATCCAGCAAAGAAGA AGATGAACGTGGAGGAATTCTGGAATCTCAGCATCAACGACCCTTAGATAGAAAGAATGAAGATTTAGTGTTGAGAAATAGAGAGAGCTAA
AA sequence Show only first row Show all	>Lus10041037 pacid=23179996 polypeptide=Lus10041037 locus=Lus10041037.g ID=Lus10041037.BGIv1.0 annot-version=v1.0 MDSIAALRLSSPPFSSRHRCSQLFSSESSLKGNKLTTIAIGRRKAVSLSIVKAVLDSRNPGINGRSSATVAARILLERLFAQTQKIEEQMTKHSQFPTDI NLEILESDLVAVLEALRNKEENLHTAEMKVEAERGELDRARKELERREEEIANVYAKYERLETELKQSNLHLASQAKQIEDLRFQLTERDREVAAVRSAL LFKEDEMEKIQMEFVEKNAEFAMLESEFRSKVQLLNRANEVINDQEIEIQQLRNVVQEKEKELETSAALRILEQQKVNALEANLRKQTKEWLLAQEELKK LYEEASDQLVETNETLEDYRRVKLLLAGVRSELVASQKSLAFSRKGMEEQELSLRKQLVDLEEERMSLASYVTNLRDARRQVDSEQTKLKVSEARNKELE RELLSEKETIEELREALRNDKSSLQRVTQQISLVRSELEKKAANLKELQSVLRNKDAELVQAKLDIGRLKSERESLLLDMEDKDSRLVNEVEKLDEVNQE VAELRMMMNGKEDQLMQATTLLKDKENQVQFMQSELDDTRLKVAEAETAVQGLVDLTNKLVSSSKEEDERGGILESQHQRPLDRKNEDLVLRNRES

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G32190			Myosin heavy chain-related pro...		Lus10041037 [exp]	0	1
AT2G15695			Protein of unknown function DU...		Lus10014042 [exp]	2.4	0.9322
AT1G03090		MCCA	methylcrotonyl-CoA carboxylase...		Lus10042623 [exp]	3.2	0.9410
AT3G45300		IVDH, ATIVD, IV...	isovaleryl-CoA-dehydrogenase (...		Lus10036122 [exp]	4.0	0.9404
					Lus10024788 [exp]	5.7	0.8944
AT2G46550			unknown protein		Lus10005973 [exp]	6.0	0.8833
AT2G35800		SAMTL	S-adenosyl methionine transpor...		Lus10023493 [exp]	7.1	0.9260
AT4G24800		ECIP1	EIN2 C-terminus Interacting Pr...		Lus10018085 [exp]	7.9	0.9240
AT4G32190			Myosin heavy chain-related pro...		Lus10006190 [exp]	8.0	0.9314
AT5G49650		XK2, XK-2	XYLULOSE KINASE 2, xylulose ki...		Lus10028235 [exp]	8.4	0.9103
AT4G26140		BGAL12	beta-galactosidase 12 (.1.2)		Lus10040557 [exp]	8.5	0.9250

Compare expression of checked genes

Lus10041037 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.