Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G10050 415 / 9e-145 esterase/lipase/thioesterase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10006170 [exp] 482 / 9e-171 AT4G10050 530 / 0.0 esterase/lipase/thioesterase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.019G072900 [exp] 437 / 2e-153 AT4G10050 555 / 0.0 esterase/lipase/thioesterase family protein (.1) Potri.013G099900 [exp] 428 / 1e-149 AT4G10050 549 / 0.0 esterase/lipase/thioesterase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0028 [flax] [poplar] AB_hydrolase PF00561 [flax] [poplar] Abhydrolase_1 alpha/beta hydrolase fold
Representative CDS sequence Show only first row Show all	>Lus10041054 pacid=23179964 polypeptide=Lus10041054 locus=Lus10041054.g ID=Lus10041054.BGIv1.0 annot-version=v1.0 ATGAGCCCATACGGCCCGGAATACCGTTTTCTTCTCCTACCCAATTTTTTGCCGGATTCTTCCCATCCCAACCCCACTTTCTTTTCCACATTTCCGGGGA AGTGCCCACCCGAGAAGGCATTTCCGGCGAAAGATCTCAACACAAACTGCTCCGCTAATCCTATTAAAGTTCCCATGGATTCATCGTCGAACTTGAGTCC ACTTGCAGAGGAGAGCTCAGGAGACGAGCTGCGAAGTCCTCAGGGACAAGACGATGAAACCCCAAAGCCCCCGGTCTCTGCTTTTGCCTCCATTCCTGAT CGCCCTGCCTCCCAGCTTTCTTTTGCCCTATCAGCTGCTCAAATTAAAGAGAAAGCTCGCATTGTTGCTATGGACATGAGAGGACATGGAAAGACAGTCA CAGAGAATGATCTTGACCTATCCATTGAGACATTGTGCAAAGATGTTCTTGCTGTCGTGACTGCAATGTTTGGCAGTTCTCCTCCAGCAATTATACTTGT AGGCCACAGCATGGGTGGGTCTGTTGCTGTCCATGTTGCTGCAAAGAAGTTGATTCCTCAGTTGGCCGGCCTGATTGTTGTTGATGTCGTAGAGGGGACT GCAATTGCTTCACTAGCTCACATGCAGAAGATCCTTTCAAGCAGGATGCAGCATTTCCCAAGTGTTGAAAAGGCAATAGAATGGAATGTTAAAGGAGGTT CTTTACGAAATATTGATTCTGCTCGAGTATCTATTCCTACAACGCTAAAGTATGATGATGCCAGGAAATGCTATGTTTATCGAGCACGGCTAGTGGAAAC TGAACAATACTGGAGAGGATGGTATGAGGGTCTCTCCGAAAAGTTCTTGTCATGTCCGGTTCCGAAGCTATTGCTTTTAGCAGGAGCGGACAGATTGGAC AAGGTGCTCACAATCGGCCAAATGCAAGGGAAGTTCCAAATGGTAGTTGTTAGACATACGGGGCATGCAATCCAGGAGGATGTGCCGGATGAATTTGCGA CTTTGATAGTTAATTTCATATCTCGCAACCGCATAGGTCCTAACGGAGTCGAGGTCAGTGCTGTCCTTCTGGTTTGTTTTCCCCACACCAAATGTCAAGC TCTTTGGATGGCTGATCTAATCTGCCTAGTTATGAATTCTTCTTTTGCAGATACCGGGGCTTCGTCGACCATTGAAATCATAGATGATAGAACTAATGAG ACCACTACGCCCCTGGTTAATCTGTACTAA
AA sequence Show only first row Show all	>Lus10041054 pacid=23179964 polypeptide=Lus10041054 locus=Lus10041054.g ID=Lus10041054.BGIv1.0 annot-version=v1.0 MSPYGPEYRFLLLPNFLPDSSHPNPTFFSTFPGKCPPEKAFPAKDLNTNCSANPIKVPMDSSSNLSPLAEESSGDELRSPQGQDDETPKPPVSAFASIPD RPASQLSFALSAAQIKEKARIVAMDMRGHGKTVTENDLDLSIETLCKDVLAVVTAMFGSSPPAIILVGHSMGGSVAVHVAAKKLIPQLAGLIVVDVVEGT AIASLAHMQKILSSRMQHFPSVEKAIEWNVKGGSLRNIDSARVSIPTTLKYDDARKCYVYRARLVETEQYWRGWYEGLSEKFLSCPVPKLLLLAGADRLD KVLTIGQMQGKFQMVVVRHTGHAIQEDVPDEFATLIVNFISRNRIGPNGVEVSAVLLVCFPHTKCQALWMADLICLVMNSSFADTGASSTIEIIDDRTNE TTTPLVNLY

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G10050			esterase/lipase/thioesterase f...		Lus10041054 [exp]	0	1
AT3G52640			Zn-dependent exopeptidases sup...		Lus10007387 [exp]	1.4	0.9330
AT5G50840			unknown protein		Lus10040383 [exp]	2.4	0.9206
AT4G15030			unknown protein		Lus10029514 [exp]	2.4	0.9038
AT4G02570		AXR6, ATCUL1	AUXIN RESISTANT 6, cullin 1 (....		Lus10032200 [exp]	4.0	0.9129
AT5G09860		AtTHO1, AtHPR1	nuclear matrix protein-related...		Lus10024130 [exp]	4.0	0.9012
AT1G09060			Zinc finger, RING-type;Transcr...		Lus10017092 [exp]	4.0	0.9292
AT1G06110		SKIP16	SKP1/ASK-interacting protein 1...		Lus10004805 [exp]	5.2	0.9005
AT3G47630			unknown protein		Lus10023597 [exp]	5.5	0.9045
AT2G02090		CHA19, ETL1, CH...	CHROMATIN REMODELING 19, SNF2 ...		Lus10013792 [exp]	7.3	0.8574
AT1G19340			Methyltransferase MT-A70 famil...		Lus10032722 [exp]	7.4	0.8892

Compare expression of checked genes

Lus10041054 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.