Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G02370 57 / 3e-10 ATP binding microtubule motor family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025349 [exp] 125 / 4e-34 AT5G02370 536 / 0.0 ATP binding microtubule motor family protein (.1) Lus10021894 [exp] 112 / 3e-33 ND / Lus10024395 [exp] 118 / 2e-31 AT5G02370 593 / 0.0 ATP binding microtubule motor family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G085300 [exp] 48 / 5e-07 AT5G02370 660 / 0.0 ATP binding microtubule motor family protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041176 pacid=23179546 polypeptide=Lus10041176 locus=Lus10041176.g ID=Lus10041176.BGIv1.0 annot-version=v1.0 ATGGACGGGAACAGCTTGACCGTTGCATCGCAAGCTGCTGAGAAGCAAACCAGTAGCATGGAGCGAAACCCTTTGAGGAAAGTGTTATCCCCAATATGTT CAAACATTAACAGGGTGGCTCAGCAGGAAGCTACTCCTCCAAAAACACCACTCCATACTCTCCAAGGAGAGAACAACTACAACAAGAGGAATTTATGGAA ATTAAGTCTATGCTGTCCATTTATCGCCGAATATGATATTTTTTTTGAACATCAGGGTATCGGAGCAACGGCTGCGGGATACATAATTCAAGTCCGAGAA ACAAGCCCCTTGAGATCCTTTGGAGAAGACAGGGCTCTCGACGAAGCAGGTAAAGCCGGCACAAGATCATTTTGTACGAAAGCGCCATCACAGAGAATCT CTTGTTCAAATGGAAATGACGGTATTCATTAG
AA sequence Show only first row Show all	>Lus10041176 pacid=23179546 polypeptide=Lus10041176 locus=Lus10041176.g ID=Lus10041176.BGIv1.0 annot-version=v1.0 MDGNSLTVASQAAEKQTSSMERNPLRKVLSPICSNINRVAQQEATPPKTPLHTLQGENNYNKRNLWKLSLCCPFIAEYDIFFEHQGIGATAAGYIIQVRE TSPLRSFGEDRALDEAGKAGTRSFCTKAPSQRISCSNGNDGIH

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G02370			ATP binding microtubule motor ...		Lus10041176 [exp]	0	1
					Lus10002413 [exp]	4.4	1.0000
					Lus10003843 [exp]	6.8	1.0000
					Lus10004351 [exp]	8.5	1.0000
AT2G36870		XTH32	xyloglucan endotransglucosylas...		Lus10013823 [exp]	10.5	1.0000
AT5G04350			Plant self-incompatibility pro...		Lus10029383 [exp]	12.3	1.0000
AT5G35750		AHK2	histidine kinase 2 (.1)		Lus10009736 [exp]	12.5	1.0000
AT1G75660		AtXRN3, XRN3	5'-3' exoribonuclease 3 (.1)		Lus10033153 [exp]	13.8	1.0000
					Lus10015929 [exp]	14.8	1.0000
					Lus10014857 [exp]	14.9	1.0000
AT1G07985			Expressed protein (.1)		Lus10029516 [exp]	15.3	1.0000

Compare expression of checked genes

Lus10041176 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.