Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G22790 669 / 0 Kinase interacting (KIP1-like) family protein (.1) AT4G14760 586 / 0 kinase interacting (KIP1-like) family protein (.1) AT1G03080 300 / 1e-82 kinase interacting (KIP1-like) family protein (.1) AT4G02710 221 / 1e-58 Kinase interacting (KIP1-like) family protein (.1) AT2G30500 132 / 6e-32 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) AT2G22560 132 / 5e-31 Kinase interacting (KIP1-like) family protein (.1) AT5G58320 124 / 4e-29 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2), Kinase interacting (KIP1-like) family protein (.3) AT5G10500 125 / 7e-29 Kinase interacting (KIP1-like) family protein (.1) AT1G09720 123 / 4e-28 Kinase interacting (KIP1-like) family protein (.1) AT1G03470 103 / 5e-24 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021908 [exp] 2209 / 0 AT4G14760 710 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10039359 [exp] 1036 / 0 AT3G22790 1402 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Lus10022079 [exp] 339 / 7e-95 AT1G03080 1179 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10006606 [exp] 309 / 1e-90 AT3G22790 368 / 3e-111 Kinase interacting (KIP1-like) family protein (.1) Lus10014687 [exp] 320 / 6e-89 AT1G03080 938 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10006896 [exp] 265 / 1e-71 AT1G03080 927 / 0.0 kinase interacting (KIP1-like) family protein (.1) Lus10042627 [exp] 234 / 2e-63 AT4G02710 624 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Lus10035944 [exp] 131 / 2e-30 AT5G10500 280 / 3e-78 Kinase interacting (KIP1-like) family protein (.1) Lus10002655 [exp] 129 / 1e-29 AT2G22560 511 / 9e-164 Kinase interacting (KIP1-like) family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G083300 [exp] 676 / 0 AT3G22790 1306 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.002G049600 [exp] 537 / 2e-163 AT1G03080 1229 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.005G213400 [exp] 521 / 2e-157 AT1G03080 1399 / 0.0 kinase interacting (KIP1-like) family protein (.1) Potri.008G156200 [exp] 439 / 9e-132 AT3G22790 762 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.008G156250 [exp] 249 / 3e-71 AT3G22790 519 / 7e-168 Kinase interacting (KIP1-like) family protein (.1) Potri.013G158100 [exp] 134 / 4e-32 AT2G30500 384 / 7e-127 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) Potri.019G131000 [exp] 134 / 4e-32 AT2G30500 389 / 4e-129 Kinase interacting (KIP1-like) family protein (.1), Kinase interacting (KIP1-like) family protein (.2) Potri.007G011300 [exp] 135 / 1e-31 AT2G22560 851 / 0.0 Kinase interacting (KIP1-like) family protein (.1) Potri.005G147300 [exp] 133 / 3e-31 AT2G22560 421 / 2e-131 Kinase interacting (KIP1-like) family protein (.1) Potri.002G106400 [exp] 125 / 1e-28 AT1G58210 702 / 0.0 EMBRYO DEFECTIVE 1674, kinase interacting family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF07765 [flax] [poplar] KIP1 KIP1-like protein
Representative CDS sequence Show only first row Show all	>Lus10041192 pacid=23179616 polypeptide=Lus10041192 locus=Lus10041192.g ID=Lus10041192.BGIv1.0 annot-version=v1.0 ATGGAAACCTTACTGTCTTCTGAGGCCACTCGGCTATATTCATGGTGGTGGGACAGCCACATCCCCAAGAACTCCAAATGGCTTCACCAAAATCTTACAG ACATGGATGCAAAAGTTAAAGCAATGATCAAACTGATAGAGGAAGATGCAGACTCATTTGCCAGGAGGGCAGAAATGTACTACAAGAAACGTCCAGAGCT GATGAAGCTGGTCGAGGAAATCTATCGAGCTTACCGCGCATTAGCAGAAAGGTACGACCACGCAATAGCTGAGCTTTGCCATGCTCAGGAGGTGTCCGGT GGAATCGCTGATGATTCTGAAAAAACTCATGCACCGGAAATGTCTCGTGCACTTCGCACCTTGCTCGATTTCGATGACTTGAAGCACAAGGATCCTGAAG AAGCAGAAATCGAAACCTTGAAGAAAACTCTTGGTGAGATTGAAGCTGAAAAGGAAGCTCTTCTTGAGAAACTATCTTGCCTAGAGAAGGAACTCGAGAA TACCGGGGGACTGAAAGAACGAGCAAGCAGAGCTGAGATCGAGATTAGCATCCTGAAGGAAACACTCGCCAAGTTAGAAGGTGAGCGAGATGCTGATCTG GTTCGTTACAACGATTGTTTGGGGAAGATATCAGAGCTTAACGACCAGGCAATCAAAGCCGAAACAGAATCACAGAATCTCCGAAAAGAACTCTCAGGAT TGGAGGTGGAAAAGCAAAATCTCCTTCTTCAGTACAACCATTGTCTTGAGATGATATCACTTTTGGAGAGGAGAATTTCACTTGCTGAGGAAAATGCCAT GATGCTTAATGAGCTAGCTGACAAAGCAGAAACTGAAGTTAATTCTCTAAGGCAAGCTATTGCGGAATTGGAGAAGGAGAAAATTTGTCGAGAAGCACAA GAGGATTCAAATGAATCTTTGAAGTTAGAGGCGGAAAATTTGGTGCAAAGGATAGCAGTGAAGGATCAACAACTCTCAAAGAAGGGATTTGAGTTAGAAA AGCTTCATACTTTACTGGAAGAGGAGAAGTTGCAGTTCGCACAAGTCGAAGCGAATCTGCAAACGTTGCAGAAACTGCATTCAAGATCACAGGAGGAGCA GAAATATTTAGCATTAAAGCTGGAAACAAAGCTTCAAATGTTGAAAGATGCGGAGACATTGAACTGGAATCTGCAAGAGGATCTGAACCGAGTCGAGGAT GAGAATCTCAGCCTGAAAGAACTTAACACTTCTTCCAGCATTTCCATGACGAACTTGCAAAACGAAATCTCGTGCCTGAAGGAAATGAAGGAGAAGCTTG AAGAGGAAGTTTCAGTACAAGTAAGCCAAACTGATTGTCTGCAACAGGAAATTTCCCGGTTGAGGGAAGAGATTGATGCCTTGAACAGCAAGTATCAGGG TTTAATAGAGGATAATTTCAAGCTAAGAGAAGTTTCTGAAAAGGATAGAGTTGAAAACCAAGTTCTGAATGACAAATTAGAAGGCTCAAGAGATAAGGTG ATGGAATTGCAGCAATCTTGCAAGATCCTTGAGGGGGAGAAAACTGGACTGGTTGCTGAAAAGAGAATCTTGCTTTCCCAGCTTCAGCTAATGAATGAGA ACATGAAGAAAGTGTTGGAGAAAAATGCATCGGTTGAGAATCTTCTTTCTGGTGCTAATGTTGAGCTGGAAGGTCTAAAGGTAAAGAGCAGAAGCCTAGA AGAGTTGTGTGAAATGCTCAAGAGTGAAAGATCCAAACTTTCAAGCGAGAAAAGCACGTTAGTACTGCAGCTGGAAGCAGTTGAGCTAAGACTTGGAAAC CTTGAAAGTAGGTTCACAAGACTGGAAGAGAAGTACACTGATCTTGAGAAGGAGAAAGAATTCACAATCTTCCAAGTTAAAGAACTGTATGGATATCTTG GAATCGAGAAACAGGAGCGGGCATGCTACACTCGGTCAAGCGAGTCCAGGTTGACCGATCTCGAAAACCAGGTGTGTACGTTACACGAAGAAGGCCGGAT GAGGAAGAAAGAATTCGAAGAAGAGTTTGATAAATCTGTAAATGCTCAGGTTGAGATCTTCATCTTACAGAAGTTCATGGAAGATTTAGAACAGAAGAAT CTGGCACTATTGATTGAGTGCCAGAGAAATTCCGAGACTTGTAAACTGTCGAAGAATGTGATATCGGAATTGGAGGCCGAGAATCTGGAGCAGCAGGTGG AAATGGAATTCCTGTTGGATGAGATTGAGAAGTACAGTAATGGTGTTCATCAGATTTTCCTGTCACTTCAGCTTGATCCATGCCATGAACAAGCAATTAC CAGGGACGAAGAACGAATTTCCTTTACGCATATGTTGCATAATATTGAGGACCTGAAGGATGAGAAGCAGTTAATGGCAGTTGAGAACATGGTGGTTTCA ACTTTATTTGAACAGTTGGAATCTGAGTCTACCATGCTTCAAATGGAAAATCATGAACTTAAGGAGATGAATAGACGGTTGAAATCCGAAGTAAGCCAAG GAGAGCAGCAGAATGGAGGATTAAGGATCGAGTTGGAAACTCAGAACTCGAAACTGGAAAATCTACAGGATTCTTACATCTCACTGCAAGTAGAAAACTT TCAAATGCTTCAAGAAAATAACTGTCTACAGAAGAGGTTTTCAGACCTGAAAAGGGATATGGACGAACTCGAAGAGAAAGCAATTTCTCTGGCAAGCCTC TCTTCTGTTTATGAGAGCGTTGCAATGCAAAAAAGTGAGGAACTTGAATCGCTTTCACAAGTGGAGCAAAACCTGAAGGCCACTCAGGAGCAGTTGAATG TTGAATTATGCAGAATCAATGAGGATTTGAAGAGGGAGTCTGAAGAATCTATGGAAGTTAGAGAAAAGTTAGAGAAGCAGATTGCAGAATTGTGCAAGGG AATTGATGAACGCAGGGTTCGAGAAGACACCTTGAGTCTGGAGCTGTATGAAAGAAGCAATGAGTTTGAACTATGGGAGGCCGAGGCTTCATCTTTTTAC TCCGATCTTCAGATATCGTCCATTCGTGAGGTTATACTCGAAAACAAAGTTTATGAGCTCTCTGCATTTTGTGCTAGCCTTGAAGATGAAAGGGCCAAAA AAGATTTGGAGATTCGCCAGATGAATGAAAAGTTCGGTCCTTTGCAGAGTGAAATCCAAGGACTGAAGTCTCAGCTTTCTGCATATGCTCCAGCTATAGC TTCCTTGAAAGATAACATTGATTCCCTGGAGCAGAATGCTCTTTTTCAGATGAAGCTTTCTGCAGATGGTGGTCAAAACCTGAAGGAACTTGACATTGTT TCTGAATATTTTGAAGCGAACGATGGACCAACTGGAACCACCATAGATGGTATCTCGGATTTGCTGAAAATGCTGCCCAAAGTTAAAACAGTGGAGAAGG CAATAACTGAGGAATTCGGAAGGCGTGAAGCTGAGAAGGCAATAGTCAAAAAGGAGAAACTAGAAATGCGAGAGAAGAAGACGAAGTCGAGGAGGCAGAG GAGATCAAGTCTGGGAGGCAGCAGCTTTAACAAGAATGAGATAGTGGCCGAGAATGATTCAACTGACGGTACCAACTTGCGAAAGAACATCAGCGAGATA TCCGAAGTACCAGATGACGATATTCTGATGAAAGACATTCAACTCGATCAGGTCTCAGGTGGTAGTTCTTCGCGGAGAAAGAGCAAAGTAGGGATTTCCA AGGCTGATGATCAGATGCTTGAAATATGCGAATTAACCGACCAAGACAACAACACCAGAGGTCCAAGACAGAAGAGTGCTTCTGAGAAGGAAGTTGGGAT TGACAAGATGGAACCAAGCAAAGAGACATCCGGCAAGATGGAACCAAAGGAGAGGCTTACTTCTGATGCTAACAAGTTCGAAGCTTTGTACTCTTCCGTT CAAGATATGAAGAAGAAGCTGGCGGTGACAAAGACAGCCACAAGCAGGAAGAAGATCAGCAACAATGAATTGGTGGAAAAGATGAAAAGAAGGCTGCAAG AGGTGGAAGAGGCAGTGGTGCAGTTGGCTGAAGGTAATGATCAGCTCAGTAAGGATATTGGAGAGGGACCCTCCTCAACTCCAAAAGGGAGGAGCCATGG AGTAAGTGAGCAAGCAATAATAGAATCAGAGACCATCGGACGGTTGGAGTTTGAAGTGAAGAACATTCAGTACATTCTGCAAAAAATCGACGAGCACGAG AACACGAGCAGAAAGAACAAAGTGCGGAGGTTTTATGGGAACAAGACCATCATTCTGCTGAGGGACTGGATCAGAAGTAGCAGGAGTATACGAAGAAGAA ACAAGACTTGTTTCGGCAGGTGCCGCAGACCAGCAACCAATGAAGGGTGA
AA sequence Show only first row Show all	>Lus10041192 pacid=23179616 polypeptide=Lus10041192 locus=Lus10041192.g ID=Lus10041192.BGIv1.0 annot-version=v1.0 METLLSSEATRLYSWWWDSHIPKNSKWLHQNLTDMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEIYRAYRALAERYDHAIAELCHAQEVSG GIADDSEKTHAPEMSRALRTLLDFDDLKHKDPEEAEIETLKKTLGEIEAEKEALLEKLSCLEKELENTGGLKERASRAEIEISILKETLAKLEGERDADL VRYNDCLGKISELNDQAIKAETESQNLRKELSGLEVEKQNLLLQYNHCLEMISLLERRISLAEENAMMLNELADKAETEVNSLRQAIAELEKEKICREAQ EDSNESLKLEAENLVQRIAVKDQQLSKKGFELEKLHTLLEEEKLQFAQVEANLQTLQKLHSRSQEEQKYLALKLETKLQMLKDAETLNWNLQEDLNRVED ENLSLKELNTSSSISMTNLQNEISCLKEMKEKLEEEVSVQVSQTDCLQQEISRLREEIDALNSKYQGLIEDNFKLREVSEKDRVENQVLNDKLEGSRDKV MELQQSCKILEGEKTGLVAEKRILLSQLQLMNENMKKVLEKNASVENLLSGANVELEGLKVKSRSLEELCEMLKSERSKLSSEKSTLVLQLEAVELRLGN LESRFTRLEEKYTDLEKEKEFTIFQVKELYGYLGIEKQERACYTRSSESRLTDLENQVCTLHEEGRMRKKEFEEEFDKSVNAQVEIFILQKFMEDLEQKN LALLIECQRNSETCKLSKNVISELEAENLEQQVEMEFLLDEIEKYSNGVHQIFLSLQLDPCHEQAITRDEERISFTHMLHNIEDLKDEKQLMAVENMVVS TLFEQLESESTMLQMENHELKEMNRRLKSEVSQGEQQNGGLRIELETQNSKLENLQDSYISLQVENFQMLQENNCLQKRFSDLKRDMDELEEKAISLASL SSVYESVAMQKSEELESLSQVEQNLKATQEQLNVELCRINEDLKRESEESMEVREKLEKQIAELCKGIDERRVREDTLSLELYERSNEFELWEAEASSFY SDLQISSIREVILENKVYELSAFCASLEDERAKKDLEIRQMNEKFGPLQSEIQGLKSQLSAYAPAIASLKDNIDSLEQNALFQMKLSADGGQNLKELDIV SEYFEANDGPTGTTIDGISDLLKMLPKVKTVEKAITEEFGRREAEKAIVKKEKLEMREKKTKSRRQRRSSLGGSSFNKNEIVAENDSTDGTNLRKNISEI SEVPDDDILMKDIQLDQVSGGSSSRRKSKVGISKADDQMLEICELTDQDNNTRGPRQKSASEKEVGIDKMEPSKETSGKMEPKERLTSDANKFEALYSSV QDMKKKLAVTKTATSRKKISNNELVEKMKRRLQEVEEAVVQLAEGNDQLSKDIGEGPSSTPKGRSHGVSEQAIIESETIGRLEFEVKNIQYILQKIDEHE NTSRKNKVRRFYGNKTIILLRDWIRSSRSIRRRNKTCFGRCRRPATNEG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G14760			kinase interacting (KIP1-like)...		Lus10041192 [exp]	0	1
AT5G42710			unknown protein		Lus10016315 [exp]	4.1	0.9413
AT3G48770			DNA binding;ATP binding (.1)		Lus10004567 [exp]	4.9	0.9113
AT1G29200			O-fucosyltransferase family pr...		Lus10007290 [exp]	5.2	0.9176
AT2G26870		NPC2	non-specific phospholipase C2 ...		Lus10009690 [exp]	7.5	0.8788
AT1G29200			O-fucosyltransferase family pr...		Lus10029239 [exp]	8.8	0.9099
AT4G14760			kinase interacting (KIP1-like)...		Lus10021908 [exp]	10.2	0.9243
AT5G27000		KATD, ATK4	KINESIN-LIKE PROTEIN IN ARABID...		Lus10015212 [exp]	12.3	0.9076
AT2G18060	NAC	ANAC037, VND1	Arabidopsis NAC domain contain...		Lus10028372 [exp]	12.8	0.8504
AT2G23360			Plant protein of unknown funct...		Lus10004994 [exp]	13.7	0.9141
AT5G42710			unknown protein		Lus10010807 [exp]	18.8	0.9127

Compare expression of checked genes

Lus10041192 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.