Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G15470 333 / 2e-116 Bax inhibitor-1 family protein (.1) AT1G03070 236 / 2e-78 Bax inhibitor-1 family protein (.1.2) AT4G02690 220 / 6e-72 Bax inhibitor-1 family protein (.1) AT3G63310 210 / 3e-68 BIL4 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1) AT4G14730 194 / 8e-62 Bax inhibitor-1 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021950 [exp] 341 / 5e-120 AT4G15470 288 / 8e-99 Bax inhibitor-1 family protein (.1) Lus10022085 [exp] 225 / 8e-74 AT1G03070 406 / 3e-145 Bax inhibitor-1 family protein (.1.2) Lus10042631 [exp] 223 / 4e-73 AT1G03070 408 / 5e-146 Bax inhibitor-1 family protein (.1.2) Lus10004077 [exp] 216 / 2e-70 AT1G03070 404 / 2e-144 Bax inhibitor-1 family protein (.1.2) Lus10004078 [exp] 61 / 1e-10 AT4G02690 85 / 2e-19 Bax inhibitor-1 family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G199200 [exp] 357 / 1e-125 AT4G15470 348 / 3e-122 Bax inhibitor-1 family protein (.1) Potri.010G028900 [exp] 354 / 7e-125 AT4G15470 348 / 2e-122 Bax inhibitor-1 family protein (.1) Potri.002G049000 [exp] 233 / 4e-77 AT1G03070 393 / 2e-140 Bax inhibitor-1 family protein (.1.2) Potri.005G214000 [exp] 226 / 2e-74 AT1G03070 310 / 2e-107 Bax inhibitor-1 family protein (.1.2) Potri.008G157100 [exp] 217 / 8e-71 AT3G63310 243 / 4e-81 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1) Potri.005G213900 [exp] 177 / 5e-55 AT3G63310 259 / 9e-88 BRZ-INSENSITIVE-LONG HYPOCOTYLS 4, Bax inhibitor-1 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0453 [flax] [poplar] Apoptosis-Inhib PF01027 [flax] [poplar] Bax1-I Inhibitor of apoptosis-promoting Bax1
Representative CDS sequence Show only first row Show all	>Lus10041240 pacid=23179978 polypeptide=Lus10041240 locus=Lus10041240.g ID=Lus10041240.BGIv1.0 annot-version=v1.0 ATGTACGGATTCACAAGATTATCGGACAAGGAGCTAGGAAAGGAGGAGCTTGATCTTGAGGCAGGCAACGGCGAGACTCTCTACCCTGGGCTAGGGGTGG GCGAGAGCCAGCTCCGATGGGGATTGATTCAGAAGGTTTACGGCATTTTGGCTGCTCAGCTCGTCCTCACCACCATCATCTCCTCCTTCACCGTCCTCTA CGCTCCCGTCAACGATCTCCTCAAGGGGAGCCCCGGTCTCCTCTTGTTCCTCTGCGTCATCCCATTCGTCCTGATATGGCCCCTGCATATCTATCACCAG AAACATCCTACTAACCTGATTTTGCTGGGTCTCTTCACCATATCTTTGAGTTTCTTGGTTGGTGCAAGTTGTGCTAACACAGATGGGAAAATTGTGCTGG AGGCATTGATCCTGACCTCTGCTGTTGTCTGCTCTCTCACTGCATACACCTTCTGGGCTGCCAAGAGAGGCTATGATTTCAACTTCCTGGGACCCATTTT GTTCACCAGCCCTATGATACTCATCCTTACAAGCTTCATCCAGGTGTTCTGCCCGTTGGGTTCAACATCTACGGCAGTGATTGGTGGGATTAGTGCCTTG GTGTTCTCCGGATACATCGTCTACGACACAGACAACTTGATCAAACGCTACACATATGATCAATACATCCTTGCCTCTGTAGCGCTCTACCTGGACATCC TGAATCTCTTCCTCACCATCTTGCGCATTCTTAAGCAGTCAGAGAACTGA
AA sequence Show only first row Show all	>Lus10041240 pacid=23179978 polypeptide=Lus10041240 locus=Lus10041240.g ID=Lus10041240.BGIv1.0 annot-version=v1.0 MYGFTRLSDKELGKEELDLEAGNGETLYPGLGVGESQLRWGLIQKVYGILAAQLVLTTIISSFTVLYAPVNDLLKGSPGLLLFLCVIPFVLIWPLHIYHQ KHPTNLILLGLFTISLSFLVGASCANTDGKIVLEALILTSAVVCSLTAYTFWAAKRGYDFNFLGPILFTSPMILILTSFIQVFCPLGSTSTAVIGGISAL VFSGYIVYDTDNLIKRYTYDQYILASVALYLDILNLFLTILRILKQSEN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G15470			Bax inhibitor-1 family protein...		Lus10041240 [exp]	0	1
AT4G09830			Uncharacterised conserved prot...		Lus10028732 [exp]	1.0	0.8992
AT4G15470			Bax inhibitor-1 family protein...		Lus10021950 [exp]	2.0	0.8823
AT4G01575			serine protease inhibitor, Kaz...		Lus10030166 [exp]	3.0	0.8255
AT5G46170			F-box family protein (.1)		Lus10038511 [exp]	12.6	0.7393
AT3G62770		ATATG18A	autophagy 18a, Transducin/WD40...		Lus10036577 [exp]	14.0	0.7717
AT5G27280			Zim17-type zinc finger protein...		Lus10021838 [exp]	16.4	0.7303
					Lus10012576 [exp]	19.1	0.7402
AT5G10770			Eukaryotic aspartyl protease f...		Lus10042426 [exp]	19.3	0.7212
AT1G48745			unknown protein		Lus10007969 [exp]	20.1	0.6293
AT5G06260			TLD-domain containing nucleola...		Lus10021306 [exp]	22.4	0.7195

Compare expression of checked genes

Lus10041240 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.