Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G43790 167 / 5e-49 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13750 127 / 1e-34 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 128 / 2e-34 ZIF1 zinc induced facilitator 1 (.1) AT5G13940 44 / 7e-05 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037425 [exp] 241 / 8e-77 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10033392 [exp] 147 / 3e-41 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034847 [exp] 144 / 6e-40 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 141 / 7e-39 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 142 / 2e-38 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 140 / 2e-38 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 139 / 4e-38 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 137 / 2e-37 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 110 / 1e-27 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 137 / 2e-37 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 134 / 2e-36 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 122 / 3e-32 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 66 / 4e-13 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041286 pacid=23179574 polypeptide=Lus10041286 locus=Lus10041286.g ID=Lus10041286.BGIv1.0 annot-version=v1.0 ATGCAGGAGACACTGCACATGCATGGAAAAGAAAAGAACGGAAGATGTGATTCAGAAATTAGTAGAGAAGAAGCCTCTGCTGAGGAGTCTACTATGAAGG GTGATGTTGAAGAAATACTTGCACTTTGGCAAGTTAGCGACAAGAAGTATGGAGGATTGAGTTTTTCATCACAAGATGTTGGTGAAGTTCTAGCCATTTC TGGGGTTGGTCTTTTCCTGTTCCAGCTTCTTCTTTACCCTCCAATTCAAAGAGTTGTTGGGCCTCTTATGGTTACGCGCCCCTGTCAGCGGCAATATCAA TACCCTTGCTGTCTAGCTTCCCATTCATGGAAAATGCTGTCTGGGATAGTTCTCCATGTAGTACTAAACTGTGCAGCCATCGTCAGAAACACTCTCTCCG TGTCGCTTGTTACCGGGCTGTATATATTACAGAACAAAGCTGTGCCGCAAAGTCAGCGAGCAGCTGCAAATGGGATTTCCTTAACTGCAATGTCTGTTTT CAAAGCATTTGGTCCTGCAGGAGGAGGCGCCCTCTTTGCTTGGGCACAAAAATGGCAAGTTGCTTCCTTTCTTCCGGGTACGTACTACGCAATCTCCTTT TCCTTTGTACTGTTAGCTGAAACTGTAATGCTCCTTCTGGATAAAACTTACTGTAATGTTGTTGCAGGGGATCCTCACTTTCAAGCCCTTCCTCGCAGTA CCAAACTGATATTCTTTCTGCCACACAAACGCCATAGTTTTTAA
AA sequence Show only first row Show all	>Lus10041286 pacid=23179574 polypeptide=Lus10041286 locus=Lus10041286.g ID=Lus10041286.BGIv1.0 annot-version=v1.0 MQETLHMHGKEKNGRCDSEISREEASAEESTMKGDVEEILALWQVSDKKYGGLSFSSQDVGEVLAISGVGLFLFQLLLYPPIQRVVGPLMVTRPCQRQYQ YPCCLASHSWKMLSGIVLHVVLNCAAIVRNTLSVSLVTGLYILQNKAVPQSQRAAANGISLTAMSVFKAFGPAGGGALFAWAQKWQVASFLPGTYYAISF SFVLLAETVMLLLDKTYCNVVAGDPHFQALPRSTKLIFFLPHKRHSF

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G43790		ZIFL2	zinc induced facilitator-like ...		Lus10041286 [exp]	0	1
AT1G32400		TOM2A	tobamovirus multiplication 2A ...		Lus10040108 [exp]	2.6	0.8299
AT1G34670	MYB	ATMYB93	myb domain protein 93 (.1)		Lus10018546 [exp]	2.8	0.7737
AT1G15520		ATABCG40, ABCG4...	Arabidopsis thaliana ATP-bindi...		Lus10022663 [exp]	3.5	0.8180
AT3G57170			N-acetylglucosaminyl transfera...		Lus10003248 [exp]	8.7	0.7779
AT5G36930			Disease resistance protein (TI...		Lus10042714 [exp]	15.5	0.7030
AT5G24090		ATCHIA	chitinase A (.1)		Lus10009215 [exp]	18.0	0.6654
AT3G48200			unknown protein		Lus10002461 [exp]	24.6	0.7731
AT1G30590			RNA polymerase I specific tran...		Lus10018154 [exp]	27.4	0.7666
					Lus10007992 [exp]	29.1	0.7242
					Lus10026470 [exp]	31.1	0.6122

Compare expression of checked genes

Lus10041286 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.