Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G61560 678 / 0 ATMLO6, MLO6 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) AT2G39200 665 / 0 ATMLO12, MLO12 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) AT1G11310 642 / 0 PMR2, ATMLO2, MLO2 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) AT2G33670 402 / 2e-134 ATMLO5, MLO5 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) AT2G17480 396 / 9e-131 ATMLO8, MLO8 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) AT1G42560 385 / 2e-128 MLO9, ATMLO9 ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 9, Seven transmembrane MLO family protein (.1) AT5G65970 373 / 2e-122 ATMLO10, MLO10 MILDEW RESISTANCE LOCUS O 10, Seven transmembrane MLO family protein (.1) AT2G17430 363 / 7e-119 NTA, ATMLO7, MLO7 NORTIA, MILDEW RESISTANCE LOCUS O 7, Seven transmembrane MLO family protein (.1) AT3G45290 357 / 1e-116 ATMLO3, MLO3 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) AT2G44110 323 / 6e-104 ATMLO15, MLO15 MILDEW RESISTANCE LOCUS O 15, Seven transmembrane MLO family protein (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10036519 [exp] 1067 / 0 AT1G61560 763 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10040388 [exp] 818 / 0 AT2G39200 735 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10023506 [exp] 783 / 0 AT2G39200 731 / 0.0 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Lus10036120 [exp] 483 / 4e-165 AT1G61560 599 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Lus10019630 [exp] 419 / 2e-139 AT2G17480 711 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10030729 [exp] 405 / 2e-135 AT2G33670 628 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Lus10022096 [exp] 403 / 4e-133 AT2G17480 687 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Lus10036121 [exp] 396 / 2e-131 AT3G45290 542 / 0.0 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Lus10013211 [exp] 389 / 7e-129 AT2G33670 623 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G041400 [exp] 722 / 0 AT1G61560 768 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.010G220500 [exp] 721 / 0 AT1G61560 743 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.009G011900 [exp] 646 / 0 AT1G61560 603 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.016G088000 [exp] 535 / 0 AT1G61560 576 / 0.0 MILDEW RESISTANCE LOCUS O 6, Seven transmembrane MLO family protein (.1.2.3.4) Potri.007G064200 [exp] 460 / 3e-156 AT2G39200 502 / 4e-173 MILDEW RESISTANCE LOCUS O 12, Seven transmembrane MLO family protein (.1) Potri.006G129700 [exp] 427 / 6e-144 AT3G45290 505 / 1e-175 MILDEW RESISTANCE LOCUS O 3, Seven transmembrane MLO family protein (.1) Potri.005G099200 [exp] 417 / 4e-139 AT2G17480 624 / 0.0 MILDEW RESISTANCE LOCUS O 8, Seven transmembrane MLO family protein (.1) Potri.002G006700 [exp] 415 / 6e-139 AT2G33670 593 / 0.0 MILDEW RESISTANCE LOCUS O 5, Seven transmembrane MLO family protein (.1) Potri.002G007000 [exp] 416 / 1e-138 AT1G11310 448 / 7e-152 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2) Potri.005G254300 [exp] 412 / 7e-138 AT1G11310 461 / 3e-157 POWDERY MILDEW RESISTANT 2, MILDEW RESISTANCE LOCUS O 2, Seven transmembrane MLO family protein (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03094 [flax] [poplar] Mlo Mlo family
Representative CDS sequence Show only first row Show all	>Lus10041410 pacid=23179878 polypeptide=Lus10041410 locus=Lus10041410.g ID=Lus10041410.BGIv1.0 annot-version=v1.0 ATGGCAGACAAAGCCAACATGGAAAGGACTCTGGAAGAGACGCCAACTTGGGCTGTCGCCGCCGTCTGTTTCGTCCTCGTCGTCATTTCCATCTTCATTG AGCATATCATCCACCTCATCCATAAGTGGTTGCATAAACTGCACAAGCCAGCGCTGGTGGAAGCGCTGGAGAAAGTGAAAGCGGAGCTGATGCTGCTTGG ATTCCTGTCCTTGCTGCTCACAGTATTTCAATCCCCAATATCGAGTATTTGCGTCTCTAGAGAGATTGGAGGGACTTGGCATCCTTGTACCAAAAAGGAA GAGAAAAGCAAAGATGATTCAGGGGAAAACCGGCGCCGCCTCCTGGGGTTCTTAGATCCTGATATGATTCCTAGACGAAGCTTAGCGACAAAAGGCGTTG ACAAGTGTACTGAACAGGGAAAAGTTGCGTTTGTTTCAGCATACGGTATCCACCAGCTGCATATATTTATCTTTGTGCTGGCGTTTTTCCACATCCTTTA CTGCATCATCACCTATATTCTAGGCAGAACTAAGATGCGGAAGTGGAGGCAGTGGGAGGATGAGACCAAAACACTTGAGTATCAGTATCATAACGATCCA GAGAGATTTAGGTTTGCAAGAGATACATCTTTTGGGCGGCGCCACTTGAAAATGTGGAGCAAGTCTACTATTCTGCTTTGGATTGTCAGCTTCTTCAGGC AGTTCTTTAGATCGGTTACCAAAGTCGATTACATGACGCTGAGACATGGATTCATAGCGGCACATTTGGCTCCTGGAAGTGAGAGCAGATTTGATTTCCA GAAATACGTCAACAGATCACTTGAGGATGATTTCAAAGTTGTTGTAGGGATCAGTCCGATTCTATGGTTTTTTGCAGTCTTGTTCCTACTATCCAATACA CATGGATGGGTAGCATATCTGTGGCTACCCTTTATTCCATTAATCATAATCTTGGTTGTTGGTACAAAGCTACAAGTGATCATAACCCAGCTAGGGCTAA GCATACAAGACAGAGGAGATGTGGTAAAGGGTGCCCCTGTGGTTCAGCCAGGAGATAACCTCTTCTGGTTTGGACGCCCTCGCCTCGTTCTCTTCCTCAT CCATTTCTGCCTCTTCCAAAATGCATTTCAACTTGCTTTCTTCATATGGAGTGTGTACGAATTCGGAATCAAAACTTGCTTCCACGAGAAAACCGAGGAC ATTGTCATCCGAATCACCATGGGGGTGATCATTCAAGTGCTATGCAGTTACGTGGTTCTACCGCTATACGCCCTAGTGACTCAAATGGGTTCAAACATGA GACCCACAATATTCAACGACAGAGTAGCGTCGGCTTTGAAGAACTGGCACAGAACGGCTAGAAGACAGACGAGACATGGTGGATCCCACACCCCGACTTC GAGCCGGCCTGCAACGCCAACCCATGGCATGTCCCCTGTACACCTCCTCCACAATTATCGGAGCAGCACTGCTCCAGACAGCCTCATGAACTCTCCAGCT AGGAATTCCAACTTCGACAACGATCATTGGGACCCTGAGGCTCTCAACTCTCCTTCCCCCCACCAATATAGCAGCCACGGTGGCGGCGACCACAGGGAGC TTGACGAGTTCCACCATGAGTTCCACCACGATGCCAGCCTGAGGGATCAACCAGGAGGGGAGGCTGAGGATGTTGTGGTGGCTGTGAGAAATCAAGAGCT CCGGGGAGCGGCTGCCTCTGAGGAGATGCAGCTGCCACCGGGCCCCGGGTCGATCAGGACGCAGCATGAGATGAACATTGGGTTGTCGGACTTCACATTC CGGAAAGGATGA
AA sequence Show only first row Show all	>Lus10041410 pacid=23179878 polypeptide=Lus10041410 locus=Lus10041410.g ID=Lus10041410.BGIv1.0 annot-version=v1.0 MADKANMERTLEETPTWAVAAVCFVLVVISIFIEHIIHLIHKWLHKLHKPALVEALEKVKAELMLLGFLSLLLTVFQSPISSICVSREIGGTWHPCTKKE EKSKDDSGENRRRLLGFLDPDMIPRRSLATKGVDKCTEQGKVAFVSAYGIHQLHIFIFVLAFFHILYCIITYILGRTKMRKWRQWEDETKTLEYQYHNDP ERFRFARDTSFGRRHLKMWSKSTILLWIVSFFRQFFRSVTKVDYMTLRHGFIAAHLAPGSESRFDFQKYVNRSLEDDFKVVVGISPILWFFAVLFLLSNT HGWVAYLWLPFIPLIIILVVGTKLQVIITQLGLSIQDRGDVVKGAPVVQPGDNLFWFGRPRLVLFLIHFCLFQNAFQLAFFIWSVYEFGIKTCFHEKTED IVIRITMGVIIQVLCSYVVLPLYALVTQMGSNMRPTIFNDRVASALKNWHRTARRQTRHGGSHTPTSSRPATPTHGMSPVHLLHNYRSSTAPDSLMNSPA RNSNFDNDHWDPEALNSPSPHQYSSHGGGDHRELDEFHHEFHHDASLRDQPGGEAEDVVVAVRNQELRGAAASEEMQLPPGPGSIRTQHEMNIGLSDFTF RKG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G61560		ATMLO6, MLO6	MILDEW RESISTANCE LOCUS O 6, S...		Lus10041410 [exp]	0	1
AT3G17000		UBC32	ubiquitin-conjugating enzyme 3...		Lus10037759 [exp]	3.9	0.8467
AT4G39140			RING/U-box superfamily protein...		Lus10017978 [exp]	4.7	0.8137
AT4G39140			RING/U-box superfamily protein...		Lus10041970 [exp]	5.3	0.8045
AT5G27280			Zim17-type zinc finger protein...		Lus10034555 [exp]	6.7	0.8096
AT2G27600		ATSKD1, VPS4, S...	VACUOLAR PROTEIN SORTING 4, SU...		Lus10019537 [exp]	10.7	0.8038
AT3G52760			Integral membrane Yip1 family ...		Lus10022723 [exp]	11.4	0.7393
AT3G62220			Protein kinase superfamily pro...		Lus10010072 [exp]	13.0	0.7477
AT4G04860		DER2.2	DERLIN-2.2 (.1)		Lus10006771 [exp]	14.3	0.8009
AT4G36660			Protein of unknown function (D...		Lus10007156 [exp]	14.5	0.7616
AT2G20920			Protein of unknown function (D...		Lus10025079 [exp]	15.6	0.7752

Compare expression of checked genes

Lus10041410 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.