Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G38130 287 / 3e-100 ATMAK3 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) AT5G11340 62 / 3e-12 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT1G03150 39 / 0.0007 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) AT2G06025 39 / 0.001 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012579 [exp] 384 / 1e-138 AT2G38130 286 / 7e-100 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Lus10008088 [exp] 56 / 2e-09 AT5G11340 249 / 2e-85 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10013120 [exp] 51 / 5e-08 AT5G11340 256 / 8e-89 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10042595 [exp] 41 / 0.0002 AT1G03150 348 / 6e-125 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Lus10037996 [exp] 41 / 0.0002 AT2G39000 335 / 2e-115 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.3) Lus10009229 [exp] 39 / 0.0007 AT2G39000 320 / 5e-112 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.3) Lus10021559 [exp] 39 / 0.001 AT2G06025 244 / 2e-80 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G435300 [exp] 316 / 2e-111 AT2G38130 299 / 6e-105 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.001G432400 [exp] 315 / 2e-111 AT2G38130 296 / 4e-104 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.001G429200 [exp] 315 / 3e-111 AT2G38130 299 / 6e-105 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.011G139300 [exp] 308 / 3e-108 AT2G38130 294 / 1e-102 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.001G425800 [exp] 222 / 5e-75 AT2G38130 207 / 2e-69 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.001G433800 [exp] 121 / 8e-36 AT2G38130 117 / 3e-34 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2) Potri.006G248900 [exp] 61 / 1e-11 AT5G11340 280 / 3e-98 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.018G032400 [exp] 57 / 2e-10 AT5G11340 270 / 4e-94 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.006G142100 [exp] 40 / 0.0007 AT2G06025 347 / 1e-120 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1) Potri.008G039300 [exp] 39 / 0.0008 AT2G39000 387 / 1e-135 Acyl-CoA N-acyltransferases (NAT) superfamily protein (.1), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.2), Acyl-CoA N-acyltransferases (NAT) superfamily protein (.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0257 [flax] [poplar] Acetyltrans PF00583 [flax] [poplar] Acetyltransf_1 Acetyltransferase (GNAT) family
Representative CDS sequence Show only first row Show all	>Lus10041514 pacid=23146704 polypeptide=Lus10041514 locus=Lus10041514.g ID=Lus10041514.BGIv1.0 annot-version=v1.0 ATGGACGGTGAGCGAGGTGTAGAAGGAGACACCCCAAAAGAAGAGAGAGCTACATTCGATGAATCGGAGATAGAGTACGTGAGCTACGGCGGCGAGCATC ACCTACCGCTAATAATGGGTCTGGTTGATCAGGAGCTGAGTGAACCCTACTCCATCTTCACTTATCGCTACTTCGTATACCTATGGCCCCAGCTTTCCTT TCTGGCGTTCCATAGAGGGAGATGTGTTGGGACGGTGGTATGCAAAATGGGGGAGCATCGTAATACTACTTTCAGAGGGTACATAGCAATGCTGGTTGTC ATCAAGCCTTATCGGGGCAAAGGCATTGCTACTGAACTTGTAACCAGATCGATCAGAGCAATGATGGACTCCGGATGTGAAGAGGTAACACTGGAAGCAG AAGTAACAAATAAAGGTGCTCTTGCACTTTATGGCAGACTGGGGTTCATCAGGGCGAAACGACTGTTTCATTACTACTTGAATGGAGTAGACGCTTTTCG TCTGAAATTGCGGTTCCCTCAACTTGAGATGAACCCATCTGCCATTAATTTTCTGGACGAGACACAGAGATGA
AA sequence Show only first row Show all	>Lus10041514 pacid=23146704 polypeptide=Lus10041514 locus=Lus10041514.g ID=Lus10041514.BGIv1.0 annot-version=v1.0 MDGERGVEGDTPKEERATFDESEIEYVSYGGEHHLPLIMGLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHRGRCVGTVVCKMGEHRNTTFRGYIAMLVV IKPYRGKGIATELVTRSIRAMMDSGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPQLEMNPSAINFLDETQR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G38130		ATMAK3	Acyl-CoA N-acyltransferases (N...		Lus10041514 [exp]	0	1
AT5G50460			secE/sec61-gamma protein trans...		Lus10041552 [exp]	3.0	0.8382
AT4G26310			elongation factor P (EF-P) fam...		Lus10030360 [exp]	7.4	0.8374
AT2G42210		ATOEP16-3	Mitochondrial import inner mem...		Lus10016278 [exp]	10.5	0.8511
AT4G00585			unknown protein		Lus10012175 [exp]	11.4	0.8552
AT4G34700		CIB22, AtCIB22	B22 subunit of eukaryotic mito...		Lus10018052 [exp]	11.7	0.8387
AT5G47570			unknown protein		Lus10000735 [exp]	11.8	0.8457
AT5G49210			unknown protein		Lus10036792 [exp]	15.2	0.8172
AT3G14180	Trihelix	ASIL2	Arabidopsis 6B-interacting pr...		Lus10029220 [exp]	15.3	0.8510
AT3G59470	FAR1_related		Far-red impaired responsive (F...		Lus10026854 [exp]	15.3	0.8180
AT1G27435			unknown protein		Lus10032003 [exp]	17.5	0.8459

Compare expression of checked genes

Lus10041514 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.