Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10041530 [exp] 266 / 9e-92 ND / Lus10012560 [exp] 257 / 2e-80 AT5G41120 663 / 0.0 Esterase/lipase/thioesterase family protein (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10041531 pacid=23146658 polypeptide=Lus10041531 locus=Lus10041531.g ID=Lus10041531.BGIv1.0 annot-version=v1.0 ATGGGGGGTCAGAATCCAGAAGTTCAAGAGCCAGCAAAGACAAGTGTAGAGCATGGAAAATCGAAGGTTAAGAAACGTGCAGCTCGGAAATCATCCAAGG TACCACCGAGATGTAACCCAGACCACATCCAGCGGCGCCTCAAAGCCCTTTCTCTAGAGCCCACAATCGTTCATGATCTGACCGATGCTCTGCAGCAAAC TGACGTCTCCAAACTTTCTGAGGAAGGATCATCGGCAACAGTAGGGACGCAGAAAATGAAAGACAACGTGTGTTGGGGTGATTATGAGCCTCGGGGTATG GATACCGATAGCGATGATGATCTTTTTGACGTTTTCCCTATCTGCGAACCGTTTTTGGATGAGAAGAAGGAAGATCCTTACAAAGGTTCTTGCAAAATGG ATCCAAAATTTCTTCCTCTGCCTGATGAAGAGCTCGATTCTATGCCTGACATGAATTGGCATCCCCACGGTAATGGAAAGTCCATGGTTACGGCCCCTGC TGCAAAGGAAGAAGAAGAGGAGGAAGAAGAAGAGCGAGCAGTTCCTCCCGAATATCTACGTTTGCTCGAGCTCTTAGAGAGTAGGTATCCAATCTTGAAT ATGAAGTGA
AA sequence Show only first row Show all	>Lus10041531 pacid=23146658 polypeptide=Lus10041531 locus=Lus10041531.g ID=Lus10041531.BGIv1.0 annot-version=v1.0 MGGQNPEVQEPAKTSVEHGKSKVKKRAARKSSKVPPRCNPDHIQRRLKALSLEPTIVHDLTDALQQTDVSKLSEEGSSATVGTQKMKDNVCWGDYEPRGM DTDSDDDLFDVFPICEPFLDEKKEDPYKGSCKMDPKFLPLPDEELDSMPDMNWHPHGNGKSMVTAPAAKEEEEEEEEERAVPPEYLRLLELLESRYPILN MK

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10041531 [exp]	0	1
					Lus10041530 [exp]	1.0	0.9628
AT1G22310		ATMBD8, MBD8	methyl-CPG-binding domain 8 (....		Lus10035631 [exp]	34.1	0.7852
AT1G02330			unknown protein		Lus10026267 [exp]	39.2	0.7702
AT5G14140	C2H2ZnF		zinc ion binding;nucleic acid ...		Lus10032036 [exp]	58.7	0.7677
AT3G12170			Chaperone DnaJ-domain superfam...		Lus10013402 [exp]	69.4	0.7623
AT1G20920			P-loop containing nucleoside t...		Lus10035327 [exp]	70.2	0.7676
AT1G65520		PEC11, ECHIC, A...	"delta\(3\), delta\(2\)-enoyl ...		Lus10005159 [exp]	90.6	0.7401
AT5G18260			RING/U-box superfamily protein...		Lus10020256 [exp]	91.5	0.7484
AT4G14110		FUS7, EMB143, C...	FUSCA 7, EMBRYO DEFECTIVE 143,...		Lus10005729 [exp]	138.9	0.7383
AT3G57650		LPAT2	lysophosphatidyl acyltransfera...		Lus10040492 [exp]	166.9	0.7198

Compare expression of checked genes

Lus10041531 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.