Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G07680 1308 / 0 ATMRP11, ABCC13 ATP-binding cassette C13, multidrug resistance-associated protein 11 (.1) AT1G30400 533 / 3e-166 ATABCC1, EST1, ATMRP1 ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1, Arabidopsis thaliana ATP-binding cassette C1, ATP-binding cassette C1, multidrug resistance-associated protein 1 (.1.2) AT2G34660 531 / 1e-165 EST4, ATMRP2, ABCC2, AtABCC2 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2) AT1G30410 508 / 2e-158 ATMRP13, ABCC12 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1) AT1G30420 504 / 1e-156 ATMRP12, ABCC11 ATP-binding cassette C11, multidrug resistance-associated protein 12 (.1) AT3G60970 479 / 2e-151 ATMRP15, ABCC15 ATP-binding cassette C15, multidrug resistance-associated protein 15 (.1) AT2G47800 490 / 3e-151 EST3, ATMRP4, ABCC4 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) AT3G62700 488 / 2e-150 ATMRP10, ABCC14 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) AT3G13080 486 / 1e-149 EST2, ATMRP3, ABCC3 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) AT3G13100 485 / 2e-149 ATMRP7, ABCC7 ATP-binding cassette C7, multidrug resistance-associated protein 7 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023139 [exp] 517 / 3e-165 AT3G62700 1659 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) Lus10023275 [exp] 525 / 2e-163 AT2G34660 2553 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2) Lus10038530 [exp] 521 / 1e-161 AT2G34660 2543 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2) Lus10011498 [exp] 505 / 2e-158 AT2G47800 1796 / 0.0 ATP-binding cassette C4, multidrug resistance-associated protein 4 (.1) Lus10022858 [exp] 483 / 2e-148 AT1G04120 2341 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10018027 [exp] 481 / 9e-148 AT3G60160 1863 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10024965 [exp] 479 / 2e-147 AT1G04120 2176 / 0.0 MULTIDRUG RESISTANCE PROTEIN 5, Arabidopsis thaliana ATP-binding cassette C5, ATP-binding cassette C5, multidrug resistance-associated protein 5 (.1.2) Lus10042023 [exp] 470 / 9e-144 AT3G60160 1869 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Lus10036153 [exp] 458 / 4e-139 AT2G34660 2041 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G182601 [exp] 1469 / 0 AT2G07680 1759 / 0.0 ATP-binding cassette C13, multidrug resistance-associated protein 11 (.1) Potri.001G362200 [exp] 523 / 2e-163 AT3G13080 1952 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.004G034800 [exp] 510 / 5e-158 AT1G30410 2242 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1) Potri.011G091200 [exp] 509 / 2e-157 AT2G34660 2491 / 0.0 Arabidopsis thaliana ATP-binding cassette C2, ATP-binding cassette C2, multidrug resistance-associated protein 2 (.1.2) Potri.004G034700 [exp] 508 / 2e-157 AT1G30410 2216 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1) Potri.001G362300 [exp] 507 / 2e-157 AT3G13080 2008 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.014G180100 [exp] 504 / 3e-156 AT3G60160 1930 / 0.0 ATP-binding cassette C9, multidrug resistance-associated protein 9 (.1) Potri.014G130500 [exp] 498 / 3e-154 AT3G62700 2059 / 0.0 ATP-binding cassette C14, multidrug resistance-associated protein 10 (.1) Potri.008G179500 [exp] 496 / 5e-154 AT3G13080 1261 / 0.0 MULTIDRUG RESISTANCE PROTEIN 3, ATP-binding cassette C3, multidrug resistance-associated protein 3 (.1.2.3.4) Potri.011G043100 [exp] 497 / 6e-154 AT1G30410 2090 / 0.0 ATP-binding cassette C12, multidrug resistance-associated protein 13 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0241 [flax] [poplar] ABC_membrane PF00664 [flax] [poplar] ABC_membrane ABC transporter transmembrane region CL0023 [flax] [poplar] P-loop_NTPase PF00005 [flax] [poplar] ABC_tran ABC transporter
Representative CDS sequence Show only first row Show all	>Lus10041661 pacid=23147043 polypeptide=Lus10041661 locus=Lus10041661.g ID=Lus10041661.BGIv1.0 annot-version=v1.0 ATGACTTTTAAATCCATCACACCTGTGATGAACCATGGTATTACGAAGCAGCTTGACTTCGAAGATTTGCTTTCCCTACCGGATGATATGGAACCTTCCG TCTGTCACTCTGTATTGTCAACCTGCTGGCAACCTCAGGAAACTAGGCCTGATCCCTTTTTGCTCAAAGCTATATTCTATGCTTATGGATGGCCATATTT GAAGCTTGGTCTACTCAAGTGCTTGTGTCTCACACTAGCCGCACAATCCAAGTTCTCCGAAGGTGAAATACAGACATTTATGTCTGTTGATGCTGATCGA ACTGTTAACTTATGTAATAGCTTCCATGATATCTGGAGCTTGCCTTTACAAATTGGGGTTGCTTTGTATCTCTTGTATACTCAAGTCAGATTTGCATTTC TTGCTGGGCTAGCAATAACTATCCTATTGATACCAGTGAATAAATGGATCTCTGAGCTCATTGCAAGTGCTACCGAAAAAATGATGAAGCAAAAAGATGA AAGGATTAGACGGACTGGAGAGATTTTATCGCATATCCGCACTCTAAAGATGTATGGGTGGGAAATGCTCTTCTCCAATTGGGTGATGGACACAAGAACA TTGGAAGTGAAGCACCTAGCTACAAGGAAGTATTTGGACGCATGGTGTGTTTTCTTTTGGGCTGCAACACCTACTCTTTTCTCTCTATGCACATTCGGAC TTTTTAGTCTGATGGGATATCAACTTGATGCTGCCACGGCCTTTATATCAACCAGACGGTTGAGCAGGTTTCTTCACTGCTCAGTTTACAAACATGAGAA GAATGTTATATCGTCCAACGATTTCTCTCCAAAAGATATGGCTGTTATTTTGCGCAATGCATGTTGTGCTTGGTCCAGTAGTGATGAAAAGCCAGAGAAC ACAGTGCTGTATCATGTCAACTTAAGCCTTCCAAAGGGTACTTTGATTGCAGTAACTGGAGAGGTTGGTTCTGGTAAATCGTCCTTGTTGGGTGCAATAT TAGGAGAAATGCAGCTCATCAATGGTTCCGTGCATTCAAGTGGAACTGTTGCATATGTCCCTCAGTCATTCTTTGACTTAGCCATCCTTTCGTTGCACAG ATACTTGGAGACTGTGAAGGCTTGTGCGCTTGATGTTGATATTTCATTAATGGCTGGAGGAGACATGGCTTGTATTGGAGAGCAAGGCTTAAACTTATCA GGCGGGCAGAGAGCTCGTCTTGCTTTGGCCAGAGCCATTTACCAAGGGTCGGATCTGTATCTACTAGATGATGTCCTTAGTGCTGTTGATGCCCATGTTG CGCAGTGGATTTTTCACAATGCTATAAATGGTCCTCTTACAAATCAAGCAACCCGTGTTCTTTGCACTCACAATATTCAGGTAGCTTCAGATTGTGATCC CTGGCTCTTTGCAATGCAGGCTATATCATCTGCTGATCTGGTTATTGTTATGGAGAAAGGACAAGTGAAATGGGCAGGAAATTCAGTTGACCTGGTAGCT TCTTCACATCCTGCATTCTTTCAACAGAATGAATTTGATGCTTTGTCTAATGTCCAACTAGAACTCAGCCCGGAAAATTCCATACAAGGAGGAGAAGAGA GAGATCCACATGTTTTGGATACAGTGGAAGATATAATTGAAGTCGAGCAACGGAAAGAGGGCAGAGTTGAAATTTCTGTATACAAGAACTATGCTGCTTC TGCTGGTTGGTTCATCACAATTGTAATATCCCTTTCAGCAGTGTTGATGCAAGCTTCCCGTAATGGAAATGACCTGTGGCTGTCATATTGGGTTGACACC ACAGGAAACAGTCAAACAGGATATTCAACTTCCTTCTACCTGGTGGTTCTCTGCATATTCTGTGCCGCAAATTCATTTATGACACTAGTACGGGCATTTT CGTTTGCACTGGGTGGTCTGCGTGCTGCAGTTAAGGTGCATGACAGATTTCTTGATAAGCTTCTTGACGCTCCTATACAGTTCTTTGATCAAACACCAAG TGGAAGAATTCTTAACAGGTTCTCCTCAGATCTTTATACAATTGATGACTCTCTCCCATTCATGCTGAACATCCTCGTTGCCAATTTTGTTGGCCTCTTG GGTATAGCAATAGTGCTGTCATACGTGCAGGTGCCACTGTCGACATCAAGAGAATTGCGACGGCTTGACAGTGTTTCTCGATCTCCTATCTATGCAACCT TCACAGAAACGCTCAAGGGATCATCTACAATAAGAGCATTTAAGTCTGAGAGCTCTTTCCAGCGAAAGTTCACAGGGCATGTAACCTTGTATCAGCGAAC TTCTTACTCTGAGACAATAGCAAGTTTGTGGCTTTCGCTACGTCTCCAGTTGTTAGGAGCATTTATAGTCACATTTGTCGCTGTGACGGCTGTCGCTGGA TCAAGAAGCTATTTGCCGATCACCTTTGGCACCCCTGGACTGGTGGGATTGGCTCTTTCTTATGCCTCTCCAATTGTATCCTTGTTAGGAAACTTCCTAA CGAGTTTTACCGAAACCGAAAAGGAAATGGTGTCCATTGAGAGGGCTCTTGAGTACTTGGACATCCCACAAGAGGTCCTTGAAGGATCCGAACTTCTCGA CCCAAATTGGCCATCACACGGACTGATCGAATTCCAGAACGTTACAATGAGATACATGCCCTCTTTGCCACCAGCACTGTGTGATATTACATTTACAATT TCAGGAGGCACACAGGTGGGAGTTATTGGAAGAACTGGTGCTGGCAAATCTAGCATCCTGAACGCCCTTTTCCGCCTTTCACCGGTTTCCAGTGGTTGCA TTCTAGTCGATGCTCTTAACATAATGGATGTGCCTGTGAGAGATCTCCGCTCACGATTAGCTGTTGTTCCTCAAAGTCCCTTTCTATTTCAAGGGTCATT AAGGGACAACCTCGACCCTCTTCGCAATAGCAACGACTTTAAGATCTGGGATGTCCTGGAGAAATGCCATGTTAAGGACGAAGTAGAATCAGCTGGCGGA TTGGATATCCAAGTTCAGGCATCTGGATACTCATTCTCTGCAGGGCAAAGGCAGCTTCTTTGCCTCGCCCGAGCTCTTCTTAAGTCCTCGAAGCAGATAC TTTGTTTGGACGAGTGCACGGCTAATGTAGACGCACAGACAGCTAGGCTAATACAGAACACAATCTCTAGTGAATGCAGAGGGATGACAGTGATCACAAT TGCTCACCGGATTTCGACAGTGCTGAACATGGATCAAATACTGATCCTCGAACAGGGGAAGCTGGTGGAGCAAGGGAATCCACGAGCTCTTATGGAGGAT GGTAGCTCTAACTTCTCGAGTTTTGCTAAAGCATCTACCATGTAA
AA sequence Show only first row Show all	>Lus10041661 pacid=23147043 polypeptide=Lus10041661 locus=Lus10041661.g ID=Lus10041661.BGIv1.0 annot-version=v1.0 MTFKSITPVMNHGITKQLDFEDLLSLPDDMEPSVCHSVLSTCWQPQETRPDPFLLKAIFYAYGWPYLKLGLLKCLCLTLAAQSKFSEGEIQTFMSVDADR TVNLCNSFHDIWSLPLQIGVALYLLYTQVRFAFLAGLAITILLIPVNKWISELIASATEKMMKQKDERIRRTGEILSHIRTLKMYGWEMLFSNWVMDTRT LEVKHLATRKYLDAWCVFFWAATPTLFSLCTFGLFSLMGYQLDAATAFISTRRLSRFLHCSVYKHEKNVISSNDFSPKDMAVILRNACCAWSSSDEKPEN TVLYHVNLSLPKGTLIAVTGEVGSGKSSLLGAILGEMQLINGSVHSSGTVAYVPQSFFDLAILSLHRYLETVKACALDVDISLMAGGDMACIGEQGLNLS GGQRARLALARAIYQGSDLYLLDDVLSAVDAHVAQWIFHNAINGPLTNQATRVLCTHNIQVASDCDPWLFAMQAISSADLVIVMEKGQVKWAGNSVDLVA SSHPAFFQQNEFDALSNVQLELSPENSIQGGEERDPHVLDTVEDIIEVEQRKEGRVEISVYKNYAASAGWFITIVISLSAVLMQASRNGNDLWLSYWVDT TGNSQTGYSTSFYLVVLCIFCAANSFMTLVRAFSFALGGLRAAVKVHDRFLDKLLDAPIQFFDQTPSGRILNRFSSDLYTIDDSLPFMLNILVANFVGLL GIAIVLSYVQVPLSTSRELRRLDSVSRSPIYATFTETLKGSSTIRAFKSESSFQRKFTGHVTLYQRTSYSETIASLWLSLRLQLLGAFIVTFVAVTAVAG SRSYLPITFGTPGLVGLALSYASPIVSLLGNFLTSFTETEKEMVSIERALEYLDIPQEVLEGSELLDPNWPSHGLIEFQNVTMRYMPSLPPALCDITFTI SGGTQVGVIGRTGAGKSSILNALFRLSPVSSGCILVDALNIMDVPVRDLRSRLAVVPQSPFLFQGSLRDNLDPLRNSNDFKIWDVLEKCHVKDEVESAGG LDIQVQASGYSFSAGQRQLLCLARALLKSSKQILCLDECTANVDAQTARLIQNTISSECRGMTVITIAHRISTVLNMDQILILEQGKLVEQGNPRALMED GSSNFSSFAKASTM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G07680		ATMRP11, ABCC13	ATP-binding cassette C13, mult...		Lus10041661 [exp]	0	1
AT1G06490		CalS7, ATGSL7, ...	callose synthase 7, Arabidopsi...		Lus10020750 [exp]	1.4	0.8821
AT1G06490		CalS7, ATGSL7, ...	callose synthase 7, Arabidopsi...		Lus10007327 [exp]	2.0	0.8261
AT3G05740		RECQI1	RECQ helicase l1 (.1)		Lus10042451 [exp]	2.4	0.8213
AT5G16000		NIK1	NSP-interacting kinase 1 (.1)		Lus10034413 [exp]	3.5	0.7807
AT5G14940			Major facilitator superfamily ...		Lus10005603 [exp]	5.2	0.7686
					Lus10008068 [exp]	5.7	0.7707
AT3G26950			unknown protein		Lus10035181 [exp]	5.8	0.7449
AT2G37050			Leucine-rich repeat protein ki...		Lus10019907 [exp]	7.4	0.7909
AT3G14570		ATGSL4, ATGSL04	glucan synthase-like 4 (.1.2)		Lus10042478 [exp]	11.0	0.7944
AT3G06580		GAL1, GALK	GALACTOSE KINASE 1, Mevalonate...		Lus10017072 [exp]	12.1	0.6953

Compare expression of checked genes

Lus10041661 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.